mRNA_H-paniculata_contig3244.8729.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: D7G6Y7_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y7_ECTSI) HSP 1 Score: 103 bits (256), Expect = 9.820e-23 Identity = 52/60 (86.67%), Postives = 58/60 (96.67%), Query Frame = 1
Query: 1 DEDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
D+D+LT+ LRSNLTRLIAYAKSADP+LQRQVAE+LANEAVKPSRQ QIV+LGGLKLLLPL
Sbjct: 18 DDDSLTDALRSNLTRLIAYAKSADPSLQRQVAEKLANEAVKPSRQAQIVQLGGLKLLLPL 77
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: A0A2D4C729_PYTIN (Vacuolar protein 8 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4C729_PYTIN) HSP 1 Score: 88.6 bits (218), Expect = 2.880e-17 Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 1
Query: 1 DEDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
DED TE LR NL RLI YAKSAD LQR+VAE+LANEAVKP RQ QIVEL GLKLLLPL
Sbjct: 19 DEDTFTEALRVNLQRLIVYAKSADSTLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPL 78
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: A0A5D6Y1Z7_9STRA (Vacuolar protein 8 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Z7_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 8.780e-16 Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 4 EDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
+D TE LR NL RLI YAKSAD +LQR+VAE+LANEAVKP RQ QIVEL GLKLLLPL
Sbjct: 21 DDAFTEALRVNLQRLIVYAKSADTSLQREVAEKLANEAVKPDRQVQIVELEGLKLLLPL 79
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: A0A6S9E232_HETAK (Vacuolar protein 8 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E232_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 1.440e-15 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = 1
Query: 4 EDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
E+ LT+ LR +L+RLI YA+SAD LQRQVAE+LANEAVKP RQ QIVELGGLKLLLPL
Sbjct: 22 EEGLTKLLRVHLSRLIVYAESADCHLQRQVAEKLANEAVKPERQVQIVELGGLKLLLPL 80
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: A0A397ACU4_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACU4_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.470e-15 Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 4 EDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
++ T+ L+ NL RLIAYAKSAD LQR+VAE+LANEAVKP RQ QIVEL GLKLLLPL
Sbjct: 20 DEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPL 78
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: A0A418DV07_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DV07_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.890e-15 Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 4 EDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
++ T+ L+ NL RLIAYAKSAD LQR+VAE+LANEAVKP RQ QIVEL GLKLLLPL
Sbjct: 20 DEGFTDALKINLQRLIAYAKSADANLQREVAEKLANEAVKPDRQVQIVELDGLKLLLPL 78
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: H3HCQ8_PHYRM (Vacuolar protein 8 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCQ8_PHYRM) HSP 1 Score: 84.0 bits (206), Expect = 6.460e-15 Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = 1
Query: 1 DEDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
D++ TE LR NL RLI YA+SAD ALQR+VAE+LANEAVKP RQ QIVEL GL+LLLPL
Sbjct: 197 DDEAFTEALRVNLQRLIVYARSADTALQREVAEKLANEAVKPDRQVQIVELDGLELLLPL 256
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: A0A835YNM9_9STRA (Vacuolar protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 9.250e-15 Identity = 42/60 (70.00%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 1 DEDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
D++ L+ LR +L+RLIAYA+SAD +LQRQVAE+LANEAV+P RQ QI ELGGL+LLLPL
Sbjct: 19 DDEGLSTALRIHLSRLIAYAESADVSLQRQVAEKLANEAVRPERQVQIAELGGLRLLLPL 78
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: A0A7S1TZQ4_9STRA (Vacuolar protein 8 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZQ4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 9.670e-15 Identity = 41/60 (68.33%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 1 DEDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
DE+ ++E +R+ L+RLI YA+S+D LQR VAE+LANEAVKP+RQ QIVELGGL+LLLPL
Sbjct: 71 DENGISEVMRTQLSRLIIYAESSDVQLQRDVAEKLANEAVKPARQVQIVELGGLELLLPL 130
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Match: F0WLI4_9STRA (Vacuolar protein 8 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLI4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.220e-14 Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 4 EDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVELGGLKLLLPL 180
++ TE L+ NL RLIAYAKSAD +LQR+VAE+LANEAVKP RQ QIVEL GL+LLLPL
Sbjct: 19 DEGFTEALQINLQRLIAYAKSADTSLQREVAEKLANEAVKPDRQVQIVELCGLELLLPL 77 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3244.8729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3244.8729.1 >prot_H-paniculata_contig3244.8729.1 ID=prot_H-paniculata_contig3244.8729.1|Name=mRNA_H-paniculata_contig3244.8729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp DEDNLTETLRSNLTRLIAYAKSADPALQRQVAERLANEAVKPSRQGQIVEback to top mRNA from alignment at H-paniculata_contig3244:5372..7494+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3244.8729.1 ID=mRNA_H-paniculata_contig3244.8729.1|Name=mRNA_H-paniculata_contig3244.8729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2123bp|location=Sequence derived from alignment at H-paniculata_contig3244:5372..7494+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3244:5372..7494+ >mRNA_H-paniculata_contig3244.8729.1 ID=mRNA_H-paniculata_contig3244.8729.1|Name=mRNA_H-paniculata_contig3244.8729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1512bp|location=Sequence derived from alignment at H-paniculata_contig3244:5372..7494+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |