mRNA_H-paniculata_contig11359.872.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5L513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L513_9PHAE) HSP 1 Score: 146 bits (368), Expect = 1.370e-42 Identity = 63/124 (50.81%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 1 MTSRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 M +R GP L+ EE+ ++E+ L+YAGR CL +G L V+ +C+DGRP+PWDP +GPG++W GF++RHPR+S R + +EANR+T D + R+ EFY W DE KP ADH+ NTDETG Sbjct: 1 MKARVGPATFLSEEEEKSLEDVLLYAGRHCLAVGRLHLLETVIQLCNDGRPIPWDPGQGPGKDWLAGFLKRHPRVSERTTRIYEANRITEDKEPRIVEFYKKWAALLDEHKPEADHVHNTDETG 124
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5JTL4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL4_9PHAE) HSP 1 Score: 140 bits (354), Expect = 6.510e-40 Identity = 61/123 (49.59%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 1 MTSRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDET 369 M +R G VLT EE+ A+E+ L+YA R + + ++LK V +C+DGRP+PWDP+KGPG+ W GF+RRH R+SLR + +EANR+T+ + DRL FY W+++ +E KP DH+WNTDE+ Sbjct: 49 MDARVGHGTVLTKEEENALEDVLLYACRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRHDRISLRLARIYEANRMTSPEDDRLHNFYKFWQEFVNEHKPAPDHVWNTDES 171
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5JLA4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA4_9PHAE) HSP 1 Score: 141 bits (355), Expect = 9.310e-40 Identity = 60/122 (49.18%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 7 SRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 +R G VL EE+ A+E+ L+YAGR + + ++LK V +C+DGRP+PWDP+KGPG+ W GF+RR+ R+SLR + +EANR+T+ + DRL FY W+++ +E KP DH+WNTDE+G Sbjct: 51 ARVGHGTVLMKEEENALEDVLLYAGRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRYDRISLRLARIYEANRMTSPEDDRLHNFYNFWQEFVNEHKPAPDHVWNTDESG 172
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5JNM8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM8_9PHAE) HSP 1 Score: 136 bits (343), Expect = 4.970e-39 Identity = 60/124 (48.39%), Postives = 86/124 (69.35%), Query Frame = 1 Query: 1 MTSRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 M +R GP V+TA E+ A+E L+YA R + + + +L V +C+DGRP+PW P+KGPGR W GF+ RH R+SLR + +E+NR+T + +RL +FY W Q+ DE +P ADH+WNTDE+G Sbjct: 1 MGARVGPGTVMTAGEEDALEGVLLYAARNYIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRMTCVEDERLHKFYDFWGQFLDEHQPAADHVWNTDESG 124
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5JDZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ5_9PHAE) HSP 1 Score: 137 bits (346), Expect = 2.860e-38 Identity = 60/124 (48.39%), Postives = 88/124 (70.97%), Query Frame = 1 Query: 1 MTSRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 M +R G VLT EE+ A+E+ L+YAGR + + ++LK V +C+D RP+PWDP+KG G+ W GF+R H R+SLR + +EANR+T+ + DRL +FY W+++ +E KP DH+WNTDE+G Sbjct: 49 MDARVGHGTVLTKEEENALEDVLLYAGRNYIPLTRNDLKERVRQLCNDDRPIPWDPDKGLGKSWLQGFLRGHDRISLRLARIYEANRMTSPEDDRLHKFYKFWQEFVNEHKPAPDHVWNTDESG 172
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.860e-37 Identity = 61/122 (50.00%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 7 SRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 +R GP V+TA E+ A+E+ L+YAGR + + + +L V +C+DGRP+PW P+KGPGR W GF+ RH R+SLR + +E+NRVT+ + +RL +FY W Q+ DE +P ADH+WNTDE+G Sbjct: 65 ARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESG 186
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5JRY4_9PHAE (HTH psq-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY4_9PHAE) HSP 1 Score: 131 bits (329), Expect = 2.890e-36 Identity = 57/124 (45.97%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 1 MTSRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 M ++ G +L+ EE+ ++E+ L++A R L +G L+ V +C+DGR +PWDPEKGPG++W GF RRHPR++ R + +EANR+T D++ R+ +FY W DE KP A+H+ NTDETG Sbjct: 48 MNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETG 171
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE) HSP 1 Score: 139 bits (349), Expect = 3.160e-36 Identity = 61/124 (49.19%), Postives = 86/124 (69.35%), Query Frame = 1 Query: 1 MTSRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 M +R GP V+TA E+ A+E+ L+YAGR + + +L V +C+DGRP+PW P+KGPGR W GF+ RH R+SLR + +E+NRVT +RL +F+ W Q+ DE +P ADH+WNTDE+G Sbjct: 406 MDARVGPGTVMTAAEEDALEDVLLYAGRNYIPLTPADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTCVGDERLHKFFDFWGQFLDEHQPAADHVWNTDESG 529
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5JR11_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR11_9PHAE) HSP 1 Score: 132 bits (332), Expect = 1.280e-35 Identity = 53/102 (51.96%), Postives = 76/102 (74.51%), Query Frame = 1 Query: 67 LVYAGRRCLGIGSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 L+YAGR + + ++LK V +C+DGRP+PWDP+KGPG+ W GF+RRH R+SLR + +EANR+T+ + DRL FY W+++ +E KP DH+WNTDE+G Sbjct: 7 LLYAGRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRHDRISLRLARIYEANRMTSPENDRLHNFYKFWQEFVNEHKPAPDHVWNTDESG 108
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Match: A0A6H5K8A1_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A1_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.810e-35 Identity = 60/131 (45.80%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 1 MTSRPGPPAVLTAEEDVAIEERLVYAGRRCLGI-------GSDELKRGVLNICSDGRPVPWDPEKGPGREWFVGFIRRHPRLSLRRSCNHEANRVTADDKDRLEEFYGSWKQYYDEQKPVADHIWNTDETG 372 M +R G VLT EE+ A +RC + D+LK V +C+DGRP+PWDP+KGPG+ W GF+RRH R+SLR + +EANR+T+ + DRL FY W+++ +E KP DH+WNTDE+G Sbjct: 49 MDARVGHGTVLTKEEE--------NARKRCAAVRWSELYSSHDDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRHDRISLRLARIYEANRMTSPEDDRLHNFYKFWQEFVNEHKPAPDHVWNTDESG 171 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11359.872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11359.872.1 >prot_H-paniculata_contig11359.872.1 ID=prot_H-paniculata_contig11359.872.1|Name=mRNA_H-paniculata_contig11359.872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp MTSRPGPPAVLTAEEDVAIEERLVYAGRRCLGIGSDELKRGVLNICSDGRback to top mRNA from alignment at H-paniculata_contig11359:5910..6281+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11359.872.1 ID=mRNA_H-paniculata_contig11359.872.1|Name=mRNA_H-paniculata_contig11359.872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=372bp|location=Sequence derived from alignment at H-paniculata_contig11359:5910..6281+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11359:5910..6281+ >mRNA_H-paniculata_contig11359.872.1 ID=mRNA_H-paniculata_contig11359.872.1|Name=mRNA_H-paniculata_contig11359.872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig11359:5910..6281+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |