mRNA_H-paniculata_contig3228.8697.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: D8LL02_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL02_ECTSI) HSP 1 Score: 533 bits (1372), Expect = 2.870e-170 Identity = 403/915 (44.04%), Postives = 494/915 (53.99%), Query Frame = 1
Query: 358 LREGNRVSVFLGADKRSEKGTILFYSSGGKYNVALDNGEVEEQLLPENLSVL------RGDSEDDRRASLPREGTKSHSRSKSGSRID-----RQDYPPSGPNSDSRTR---------LLNLQPQLDSVLSLSSHSNDEDNNSRKSPSSPHSSAFESPAVSVPATGGVGSPVLQPPSTVTSSAAISLETTPAVLPSPSPAQVDSGNSSEEPDTARERGTSSEGGALSPLSPSTLRGKVRQAPGLFKTMFRRKSENWSGDEGTNAADSPRPTSRRWSKERLAAVASRRFARTNSGDHTQIDSSSAPVVDDTNTNSPKQVKTEPNSSRTVARDAIALGMD---PFNFSTPGVAAPTPAKHGETSSGEAQSLTRQLSRGRKQSRDGNKNGSGASPSPSHHSPSLAAKLGITLRGAFMGKTQLDL--AHEQGTGRFSRGIGSDDGGSDLTYSSSEDINEKLGSQRLRRRQRRQRIGRLQEGHEH---SSDGTDSEFFFPNSPLVPTNYNGDPRNLSEAVHSYIDARAKLEKDMGASGPVFLPRRSNLIASP--GGGYTIRGKRRG-SLDITKAAASMTQLTEQQLPFTEAMFKAGVSETLHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHRGEGRHPGLQIPIGREWLVPTTKTFKFNAADAQQRLLWVTVIEALMKTHGWGLNADHRRNMRAPGHGSISGAAGGGNVNRGSWD------------KSVELSTFRGSNDRDLCDR-----HDDDVPRSRGRGGAQSQVGSNVLTFMEDEARHNIDSNATSRSHGDXXXXXXXXXFDMGGSVPDPR---RGIRIPYSPNGRRGSLTTNALSAPVCSASSGRRRHQSSLKFD 2949
+R G++V V+L + ++ KG + SS +Y + L+NGEVE+++ N+++ R + D R+S R K ++R + SR D + SG +SRT +L P + + ED+ PS+ P+ A G G P+ PP + S +T P SP P + S E ERG+S + G+L S L KVRQA GL KTMF RK E G G++ + R SRRWS+ SRRF+ SGD P + N NS P S R +D P + + AA TP G A+ L+R L+RGR ++ + SPSLA KLG+TLRGA MGKTQL + H + + D GSD TYS+ ++ S+R RR R + L G +H SSDG DS+ F +SP+ T Y GDPRNL +AV+SYI AR K+E +M ASGPVFLPR NL A G GK RG SLDITK A+S TQ TEQ PFTEAMFKAGVSET HSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYA A ELRYYRTH EAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLH+GE RHPGL I G+E V TTKTFKFNAADAQQRLLWVTVIEALMK HGWG++AD R+MRAP HG ++ AG +W + V L G N + D + R R G++S V + F+ED R + D N H G + P P+ RG+ IPYSP G+RGSLTT ALS P+ G R QSSLK D
Sbjct: 116 IRTGDKVVVYLPSGGKA-KGVVSVESSRDRYEITLENGEVEKRVHSRNIALASKHRSHRRNRSDQARSSSSRSQAKKNTRRRRESRADAPGREQSHGDESGLEPESRTPREQRSNSSWVLGATPPSSAEALVGQRKVGEDDQPVSLPST-------GPSTVASAASGGGDPIQPPPVAESHSP----DTAPTRRTSPPPVEALVSESERETSNG-ERGSSLDRGSLHERGSSPLSSKVRQAQGLLKTMFWRKGEEQGGGGGSSGTEGGRSASRRWSRGNSL---SRRFSG-GSGDD--------PGENVRNLNS------VPVSGDETQRKKSTNKLDSPIPTSEHSEDAAASTPLGAAALK-GHARRLSRGLTRGRSXXXXXXXXXXXSASPATSRSPSLATKLGMTLRGAIMGKTQLGVHNPHAADVHTPAANLSDADAGSDATYSTGASSAKRDESRRERRASRPRGGALLDGGKDHGGVSSDGFDSDIFRQDSPMAATAYGGDPRNLPDAVYSYIGAREKMEHEMSASGPVFLPRVDNLAAKTVAEGAVPAWGKLRGGSLDITKQASSTTQRTEQHQPFTEAMFKAGVSETRHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYACACELRYYRTHAEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHKGESRHPGLHIRPGQESRVRTTKTFKFNAADAQQRLLWVTVIEALMKRHGWGMDADRCRSMRAPRHGGLTAGAGDSLAWGNTWGGGEAEGTEPAVKRHVSLRLNDGLNGAEAVQEVSSPLRADHRQQERSRKGSKSSV----MNFVED--RDDGDLNLQQGPHHQQNDEEMLAML-RGTTSPAPQLQQRGLSIPYSPGGKRGSLTTGALSPPM---PFGGARRQSSLKSD 988
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: A0A835ZLL0_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLL0_9STRA) HSP 1 Score: 263 bits (673), Expect = 2.620e-70 Identity = 180/438 (41.10%), Postives = 230/438 (52.51%), Query Frame = 1
Query: 1783 YNGDPRNLSEAVHSYIDARAKLEKDMGASGPVFLPRRSNLIASPGGGYTIRGKRRGSLDITKAAASMTQLTEQQLPFTEAMFKAGVSETLHSTKQGILLEGDLQKFSPESMRGVRWHKRYFVLYASAWELRYYRT---------------------------HVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHRGEGRHPGLQIPIGREWLVPTTKTFKFNAADAQQRLLWVTVIEALMKTHGWG--LNADHRRNM------------RAPGHGSISGAAGGGNVNRGSWDKSVELSTFRGSNDRDLCDRHD--DDVPRSRGRGGAQSQVGSNVLTFMEDEARHNIDSNATSRSHGDXXXXXXXXXFDMGGSVPDPRRGIRIPYSPNGRRGSLTTNALSAPVC-----SASSGRRRHQSSLKFDI 2952
Y +L AV YID R +E+ M A+GP LP+ + AS G+R G+L +K S Q + +PFTEA+FKAGVSET HSTKQGILLEG LQK+SP S+ G +WH RY VLYA + ELRYYR +A+WGRIP+GERGS PLRL+V+IEQPS K++GCRFDLV HRG GR+PG+QI G E V +TKT KF A QQRLLWVTVIE+LMK HGWG A +R+ R+P +G + G + EL + L DRH V + G +S GS L+ + E D N R H + G+V G++IP+SP GRRGSL T L+ P+ +++ G +R SSLK D+
Sbjct: 601 YEAAAPSLPRAVDDYIDVRVDMERRMSATGPRRLPQ-PHAFAS-----FADGRRHGTLSYSKELVSGAQTAAESMPFTEALFKAGVSETPHSTKQGILLEGWLQKYSPNSVAGRKWHARYCVLYAGSCELRYYRACQASGWRWFSWCVSVERQGVASETGHHDKDASWGRIPIGERGSTPLRLLVRIEQPSKAKWKGCRFDLVARHRGSGRYPGIQIRPGTERTVLSTKTLKFCAETPQQRLLWVTVIESLMKQHGWGDGPEAPQQRHAQXXXXXXXXXSSRSPSAMYSTGRSLGATGATAFGNTMTELPA------KWLDDRHGTLSFVEDAASGGDKESADGSAALSDIASEPAE--DDNEAERRHA-----------PVHGAV----GGVKIPFSPGGRRGSLVTQTLTPPIADRRASASADGAQRRSSSLKRDL 1009
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: A0A7S3UTN7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTN7_HETAK) HSP 1 Score: 110 bits (274), Expect = 1.380e-22 Identity = 70/156 (44.87%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 2062 KQGILLEGDLQKF-SPESMRGVRWHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHRGEGRH-------PGLQIPIGREWLVPTT--------------KTFKFNAADAQQRLLWVTVIEALMKT 2463
KQG LLEG L K+ S ++R WH+RYFVL A + ELRYY ++AWG IPL E+ ++PLR V +IE P+D K+ G RFDLV + G G++ PG RE T KTFK A DA RLLWVTV++ LM+T
Sbjct: 145 KQGALLEGALLKWASGGALRRGGWHERYFVLLARSRELRYYADFTDSAWGSIPLEEKCAVPLRTVERIEVPTDAKWAGRRFDLVCVDWGGGKYAADEDPQPGAPGGGEREGEEGTPXXXXXXXXXXXRAGKTFKLVAPDAATRLLWVTVLQDLMRT 300
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: A0A5D6YFM8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFM8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.980e-17 Identity = 64/183 (34.97%), Postives = 97/183 (53.01%), Query Frame = 1
Query: 1801 NLSEAVHSYIDARAKLEKDMGASGPVFLPRRSNLIASPGGGYTIRGKRRGSLDITKAAASMTQLTEQQLPFTEAMFKA-GVSETLHSTKQ------------GILLEGDLQKFSPESMRGV-RWHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDL 2307
+++ + S +R L + A P+ + RR++ + P G + R +D + AA+ + E + + A SE L ++ G+LLEG L++ ++G+ RW+ RYFVLYA + E+RYY V +AWG IPLGE GSI LRL+ KI +P KYRGCRFD+
Sbjct: 338 DVASPLSSSKGSRGTLASQLHAEAPL-INRRTSRLKQPPGSAELSSAPRSVVDSPRDAAAARRALEAAVAASGGSTDAFSGSEALSPGQRKVPGAFLGAAGSGVLLEGWLRQKQRRGVKGMKRWNARYFVLYAKSNEVRYYADVVPSAWGPIPLGEIGSISLRLIQKISKPGHPKYRGCRFDI 519
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: A0A1W0A2G2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2G2_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 9.380e-17 Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 2068 GILLEGDLQKFSPESMRGVR-WHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDLVVLHRGEG---------------RHPGLQIPIGREWLVPTTKTFKFNAADAQQRLLWVTVIEALM 2457
G+LLEG L++ +RG++ W+ RYFVLYA ELRYY V++ WG IPLGE GSI LRL+ +I +PS KY+GCRFD+ G + + P + ++ + A Q +LWV +++L+
Sbjct: 189 GVLLEGWLRQKQRRGIRGLKKWNSRYFVLYAKVHELRYYSDVVQSGWGPIPLGEIGSISLRLIQRISKPSHPKYKGCRFDITCRSSSSGVPDLDDDPLSSDDEAKKASPKQPPKIKTTPKASRVYSLIADSPQTTVLWVNTLDSLL 334
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: A0A8K1C7U9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7U9_PYTOL) HSP 1 Score: 92.8 bits (229), Expect = 1.640e-15 Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 2068 GILLEGDLQKFSPESMRGVR-WHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDL 2307
G+LLEG L++ ++G++ W+ RYFVLYA E+RYY V++AWG IPLGE GSI LRL+ +I +PS KY+GCRFD+
Sbjct: 348 GVLLEGWLRQKQRRGVKGMKKWNSRYFVLYAKTNEIRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKPSHPKYKGCRFDI 428
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: K3WY78_GLOUD (PH domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WY78_GLOUD) HSP 1 Score: 91.3 bits (225), Expect = 3.910e-15 Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 1
Query: 2071 ILLEGDLQKFSPESMRGVR-WHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDL 2307
++LEG L++ M+G++ W+ RYFVLYA E+RYY V++AWG IPLGE GSI LRL+ +I +PS KYRGCRFD+
Sbjct: 484 VVLEGWLRQKQRRGMKGMKKWNTRYFVLYAKTNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKPSHPKYRGCRFDI 563
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: A0A0W8DTJ9_PHYNI (PH domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DTJ9_PHYNI) HSP 1 Score: 88.6 bits (218), Expect = 2.440e-14 Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 2068 GILLEGDLQKFSPESMRGVR-WHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDL 2307
G+LLEG L++ ++G++ W+ RYFVLYA + E+RYY V++AWG IPLGE GSI LRL+ +I + S KY+GCRFD+
Sbjct: 374 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDI 454
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: D0N1K1_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N1K1_PHYIT) HSP 1 Score: 88.6 bits (218), Expect = 3.180e-14 Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 2068 GILLEGDLQKFSPESMRGVR-WHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDL 2307
G+LLEG L++ ++G++ W+ RYFVLYA + E+RYY V++AWG IPLGE GSI LRL+ +I + S KY+GCRFD+
Sbjct: 308 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDI 388
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Match: G4YZH2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZH2_PHYSP) HSP 1 Score: 88.6 bits (218), Expect = 3.310e-14 Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 2068 GILLEGDLQKFSPESMRGVR-WHKRYFVLYASAWELRYYRTHVEAAWGRIPLGERGSIPLRLVVKIEQPSDKKYRGCRFDL 2307
G+LLEG L++ ++G++ W+ RYFVLYA + E+RYY V++AWG IPLGE GSI LRL+ +I + S KY+GCRFD+
Sbjct: 323 GVLLEGWLRQKQRRGIKGLKKWNSRYFVLYARSNEVRYYADVVQSAWGPIPLGEIGSISLRLIQRIGKLSHPKYKGCRFDI 403 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3228.8697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3228.8697.1 >prot_H-paniculata_contig3228.8697.1 ID=prot_H-paniculata_contig3228.8697.1|Name=mRNA_H-paniculata_contig3228.8697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=978bp MWDSFESESPSEDDPNRTSEDDEILQERNPPSRNGSACGASHGGFNSRNRback to top mRNA from alignment at H-paniculata_contig3228:12315..16824+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3228.8697.1 ID=mRNA_H-paniculata_contig3228.8697.1|Name=mRNA_H-paniculata_contig3228.8697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4510bp|location=Sequence derived from alignment at H-paniculata_contig3228:12315..16824+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3228:12315..16824+ >mRNA_H-paniculata_contig3228.8697.1 ID=mRNA_H-paniculata_contig3228.8697.1|Name=mRNA_H-paniculata_contig3228.8697.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5868bp|location=Sequence derived from alignment at H-paniculata_contig3228:12315..16824+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |