prot_H-paniculata_contig32242.8687.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32242.8687.1
Unique Nameprot_H-paniculata_contig32242.8687.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Match: A0A835ZIT7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT7_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 6.930e-11
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   10 QLACSHRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPNFAEILLQPADHPRFR 63
            + AC H  C+ECL + F  ++ED SL+P+RCC +PVDPN A + L  A   RFR
Sbjct:  280 KFACDHAACRECLHRLFSTALEDTSLIPIRCCAVPVDPNLATVALTGAALARFR 333          
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Match: A0A0G4G973_9ALVE (RING-type domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G973_9ALVE)

HSP 1 Score: 63.9 bits (154), Expect = 3.240e-10
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    9 IQLACSHRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPNFAEILLQPADHPRFRFRSRWVIFS 72
            +  +C H +C  C  + FR + +D SLLPVRCC  P+DP +AE+++ P D  RF    RW  FS
Sbjct:  196 LTFSCGHTYCFLCTEELFRHATQDVSLLPVRCCRQPIDPLYAELVMNPGDLQRFM--RRWEEFS 257          
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Match: K0R694_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R694_THAOC)

HSP 1 Score: 56.6 bits (135), Expect = 9.470e-8
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0
Query:    8 GIQLACS-HRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPNFAEILLQPADHPRFRFR 65
            G  LAC  H  C +C    F+ ++ D SLLP+RCC++P+D N +  LL P D    +FR
Sbjct:   85 GFNLACGQHSICIDCSRNLFQSAVRDTSLLPLRCCDVPIDMNISSWLLSPEDSNLIQFR 143          
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Match: K0TFM9_THAOC (SAM domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TFM9_THAOC)

HSP 1 Score: 56.6 bits (135), Expect = 1.170e-7
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0
Query:    8 GIQLACS-HRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPNFAEILLQPADHPRFRFR 65
            G  LAC  H  C +C    F+ ++ D SLLP+RCC++P+D N +  LL P D    +FR
Sbjct:  265 GFNLACGQHSICIDCSRNLFQSAVRDTSLLPLRCCDVPIDMNISSWLLSPEDSNLIQFR 323          
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Match: A0A1L9WU27_ASPA1 (RING-type domain-containing protein n=1 Tax=Aspergillus aculeatus (strain ATCC 16872 / CBS 172.66 / WB 5094) TaxID=690307 RepID=A0A1L9WU27_ASPA1)

HSP 1 Score: 54.7 bits (130), Expect = 5.910e-7
Identity = 20/40 (50.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    9 IQLACSHRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPN 48
            +Q  CSHR+CK C+ + FR ++ D SLLP+RCC +P+ P+
Sbjct:  178 MQTPCSHRYCKACVLRLFREALADESLLPLRCCRLPIPPS 217          
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Match: A0A7S1DBN6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBN6_CYCTE)

HSP 1 Score: 52.4 bits (124), Expect = 3.020e-6
Identity = 20/44 (45.45%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   11 LACSHRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPNFAEILL 54
            LAC H+ C  CL + F+ ++ D+SLLP++CC +P+D   A+ LL
Sbjct:   44 LACGHKLCVACLRRLFQSALNDSSLLPLKCCELPIDMTVADSLL 87          
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Match: A0A2V5HCG1_ASPV1 (RING-type domain-containing protein n=4 Tax=Aspergillus TaxID=5052 RepID=A0A2V5HCG1_ASPV1)

HSP 1 Score: 50.8 bits (120), Expect = 1.350e-5
Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    9 IQLACSHRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPN 48
            +Q  CSHR+C+ C+ +  R ++ D SLLP+RCC +P+ P+
Sbjct:  178 MQTPCSHRYCRACVLRLVREALADESLLPLRCCRLPIPPS 217          
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Match: A0A8G1W0H3_9EURO (RING-type domain-containing protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A8G1W0H3_9EURO)

HSP 1 Score: 50.4 bits (119), Expect = 1.850e-5
Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    9 IQLACSHRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPN 48
            +Q  CSH++CK C+ +  R ++ D SLLP+RCC +P+ P+
Sbjct:  178 MQTPCSHQYCKACVLRLVREALADESLLPLRCCRLPIPPS 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32242.8687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835ZIT7_9STRA6.930e-1150.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A0G4G973_9ALVE3.240e-1043.75RING-type domain-containing protein n=1 Tax=Chrome... [more]
K0R694_THAOC9.470e-842.37Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
K0TFM9_THAOC1.170e-742.37SAM domain-containing protein n=1 Tax=Thalassiosir... [more]
A0A1L9WU27_ASPA15.910e-750.00RING-type domain-containing protein n=1 Tax=Asperg... [more]
A0A7S1DBN6_CYCTE3.020e-645.45Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A2V5HCG1_ASPV11.350e-545.00RING-type domain-containing protein n=4 Tax=Asperg... [more]
A0A8G1W0H3_9EURO1.850e-545.00RING-type domain-containing protein n=3 Tax=Asperg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 3..67
e-value: 3.8E-5
score: 25.6
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 10..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32242contigH-paniculata_contig32242:2057..2272 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32242.8687.1mRNA_H-paniculata_contig32242.8687.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32242 2057..2272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32242.8687.1 ID=prot_H-paniculata_contig32242.8687.1|Name=mRNA_H-paniculata_contig32242.8687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
MELGERPGIQLACSHRHCKECLGKAFRLSIEDASLLPVRCCNIPVDPNFA
EILLQPADHPRFRFRSRWVIFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD