prot_H-paniculata_contig32235.8682.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32235.8682.1
Unique Nameprot_H-paniculata_contig32235.8682.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length303
Homology
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 187 bits (476), Expect = 6.200e-50
Identity = 116/295 (39.32%), Postives = 170/295 (57.63%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGAVLLDIGTGVQE-SSSRRNANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKFQRLR 294
            ++DLG +S +LG+ ++RDR + T+ ISQ  Y+  VLKR+             E KP+   L + G    E S   R AN  E + ++G L Y +T T+ D+A AV   ++ M  PS+E +   KRI R+     + G TF  +     L  +  ADWA   E R+ST+  IF+++G   SWCS+KQ  V+ SSTEA+Y+A   A +E I+LR LL +IG   + ST + E+N++AI LS+    H +TKHI V +H +RE V+   + + Y +T   LADIL KGL R  F++LR
Sbjct: 1061 VEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRF----------NMEECKPVSTPL-EPGKQFHELSDDERPANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKDQTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVAFHFVREKVQDKSIDVVYCRTDEMLADILTKGLPRQTFEKLR 1344          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: M5BWJ0_THACB (Rhizoctonia solani AG1-IB WGS project CAOJ00000000 data, isolate 7/3/14, contig 10758 n=1 Tax=Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) TaxID=1108050 RepID=M5BWJ0_THACB)

HSP 1 Score: 185 bits (469), Expect = 1.150e-49
Identity = 113/292 (38.70%), Postives = 163/292 (55.82%), Query Frame = 0
Query:    3 DLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRY----VEVLIPGLVDKPPEPKPLGAVLLDIGTGVQESSSRRNANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKF 290
            DLG     +G+E+ RDR  GT+ ISQ  YI ++LKR+     +  +  + + P  PK      LD  T           N T  +  +GSLMYA   T+ DIAYA    A+   +P  E +   +R+ R+     +LG  F D+S    L  FV AD+A      +ST+  IFK+ GG+ +W SRKQ  ++ SSTEA+YVAA  A +E+I++R  L  +GF   G T +Y +N+S++ LSK  G H  TKHI V++H IRE +    + LK++ T  Q+AD+L K L R+KF
Sbjct:  458 DLGEPQMFVGVEIERDRKAGTLKISQRRYIEDILKRFGMENCKPCVTPMAEVPNLPK------LDAPT----------VNRTLYQRGIGSLMYAMISTRGDIAYATGLLAQHAANPGEEHWKALQRVLRYLRGSTNLGIIF-DRSRPSELVGFVDADYAGDPNTSRSTSGWIFKMTGGSIAWSSRKQPTISLSSTEAEYVAAASAARELIWVRGFLSELGFTQNGPTVVYTDNQSSMALSKNPGNHQNTKHIRVKYHFIREMIELKEIELKFIPTDEQIADMLTKPLGRVKF 732          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A401H2X4_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H2X4_9APHY)

HSP 1 Score: 176 bits (445), Expect = 1.640e-49
Identity = 107/295 (36.27%), Postives = 157/295 (53.22%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGA--VLLDIGTGVQESSSRRNANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTF-GDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKFQR 292
            M DLG    +LG+E+ RDRP   + +SQ  Y+ + L +Y      G+ D  P   P+     L+ +     +    ++A        LGSLMYA  GT  D+A+ V   ++    P +E +    R++R+     D    + G       L  +V ADWA ++ DR+S T  +F ++ GA SW S++Q     SSTEA+Y+A     KE ++LR  L  IG   +G T L  +N+SAI LSK +  H +TKHI VR+H IRE    G +  +YV TGNQ+AD+L KGL R K ++
Sbjct:   24 MTDLGEARWLLGMEITRDRPRRVLELSQHQYVEKCLAQY------GMADCRPVSTPMAQNQKLVKLSEAEIDPKPYQSA--------LGSLMYAMIGTHPDLAFTVSALSQHAATPGKEHWIALMRVYRYLRGTADKKLVYCGTTKEKEPLLGYVDADWAANINDRRSVTGFVFLISEGAVSWSSKRQHSTAQSSTEAEYMAGAHGTKEAVWLRTFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHEK 304          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A060S8R4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S8R4_PYCCI)

HSP 1 Score: 172 bits (436), Expect = 2.210e-48
Identity = 108/290 (37.24%), Postives = 155/290 (53.45%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGAVLLDIGTGVQESSSR-RNANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIK 289
            M DLG +S +LGI++ RD   GT  +SQ  YI  +L R+         D  P   P+    L   T   ES +          R  +G LMYA+ GT+ DI +AV   A+  ++P +  +   KR+FR+      L   +G +  +  LE FV AD A   E R++ T  +F ++GGA SW S+KQ+LVT S+ E++YVA   A KE ++LR  +G +       TTLY +N++ I L+K    H +TKHI VR+H IR  +  G + L Y  TG+  ADIL K L  +K
Sbjct:    1 MTDLGPVSWLLGIKISRDLEAGTFSLSQHAYIDALLARF------NFTDLKPMSTPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGVLMYAALGTQPDIVFAVSTLAQFAQNPGQPHWDAVKRVFRYLLGTRTLSRVYGGEKRE--LEGFVDADGATQ-EHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVATTHAAKEAVWLRRFIGEVFGPLAEPTTLYNDNQATIALTKDGSYHTRTKHIDVRYHFIRYSINAGSIRLLYCPTGDMTADILTKALPSVK 281          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE)

HSP 1 Score: 173 bits (439), Expect = 5.420e-48
Identity = 111/295 (37.63%), Postives = 163/295 (55.25%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGAVLLDIGTGVQESSSRRN-ANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKFQRLR 294
            MKDLG LS +LGI V +D+    + + Q  YI  +LK+Y      G+    P   P      DI   +++     N  + +  + M+GSL+YA+  T+ DIA AV   ++   +P+    +  KRI R+     +L   F D + +  L  F  ADWA  ++DR STT +IF L+GGA SW S+KQ  V  S+ EA+YVA  +A +E  +LR LL  +G   +  T + E+N+ AI ++K    H +TKHI +R+H IRE V+ G + L+Y  T    ADIL K L+R KF+  R
Sbjct:   80 MKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKY------GMDKANPVATPA-----DISVKLKKDDGVSNPVDPSTYQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKF-DCAGNKDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGMVTK-PTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDGEVKLEYCPTDKMKADILTKPLARQKFENFR 361          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 180 bits (456), Expect = 8.180e-48
Identity = 102/295 (34.58%), Postives = 167/295 (56.61%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGAVLLDIGTG-VQESSSRRNANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKFQRLR 294
            +KD+G L+  LG+++ +    G + + Q  Y   VLK++      G+ +  P   P+     DI T  V+ S      +  + +  +GSL+Y ST T+ DIAYAV+  AR    P+++ ++  KRI R+     +LG  +       C+  F  ADWA    DRKS +  +F+++G A SW S+KQ  V  S+ EA+Y+A   A +E +++R L+  +     G T ++E+N+SAI ++K S  H + KHI +++H IRE + GG++ L+Y  T + +AD+  KGLS+ KF +LR
Sbjct:  459 IKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKF------GMENSKPVSTPV-----DINTKLVKHSDDSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLYNKDKPKECIG-FSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEKFVKLR 741          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 170 bits (430), Expect = 1.640e-46
Identity = 99/295 (33.56%), Postives = 165/295 (55.93%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGAVLLDIGTG-VQESSSRRNANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKFQRLR 294
            +KD+G L  +LG++V ++  +G + I Q  Y   ++K+Y      G+ +  P   P+     D+ +  V         N  E +  +GSL+Y S+ T+ DI +AV+  A+   + + E ++  KRIFR+     + G  + + +N  C+  F  ADWA  + DRKST+   F++NG A SW S+KQ  V  S+ EA+YVA   A +E +++R LL  +        T+YE+N+SAI +SK    H ++KHI +++H +R+ V    L + Y  TG+ LAD+  KG+ + +F++LR
Sbjct:   94 VKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKY------GMENCKPVETPV-----DLSSKLVSAMEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCVG-FSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLR 374          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A4S4L116_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L116_9AGAM)

HSP 1 Score: 170 bits (430), Expect = 1.680e-46
Identity = 103/279 (36.92%), Postives = 152/279 (54.48%), Query Frame = 0
Query:    3 DLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGAVLLDIGTGVQESSSRRNANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTF-GDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADI 280
            DLG ++ +LGI V RDR   ++ +SQ  Y+ EVL R+      G  D  P   P+ A    + T   E   R          +LGS+M+A  GT+ D+A+ +   ++    P+ E      R+ R+     D    + G Q  +  L  FV ADWA +V DR+S +  +FK+  GA SW S+KQ     SST+A+YVA   A KE+++L  L   I   C+G TTL+ +N+SA+ +++    H +TKHIG R H +RE V  G L LKY+ TG+Q+AD+
Sbjct:  121 DLGDINWILGIHVERDRTKRSISLSQERYVEEVLSRF------GQQDAHPMVTPMLANQRLVRTEKPEVDIRTYQR------ILGSVMWAMLGTRPDLAFTIGSLSQFSSAPTEEALHALMRMLRYLCRTSDTRLVYRGTQKEE--LTGFVDADWAGNVNDRRSISGFVFKVADGAISWSSKKQGSTALSSTKAEYVAGTHAAKELVWLWALFAEISLPCKGPTTLFMDNQSAMAIAENPVYHARTKHIGARHHFLRERVEDGELELKYLPTGDQMADV 385          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 177 bits (450), Expect = 1.740e-46
Identity = 105/291 (36.08%), Postives = 155/291 (53.26%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGAVLLDIGTGVQESSSRRNANSTECRGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQSNDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKFQ 291
            M DLG    +L +E+ RDRP   + +SQ  Y+ + L+R+      G+ D  P   P+      +     E   +   ++      LGSLMYA   T+ D+A+AV   ++    P +E +    R++R+     D    +   + +  L  +V ADWA  + DR+S T  +F ++G A +W S+KQ     SSTEA+Y+A     KE I+LR  L  IG    GST L  +N+SAI L+K    H +TKHI VR+H IRE    G +  +YV TGNQ+AD+L KGL+R K +
Sbjct:  845 MTDLGEARWILSMEILRDRPRRLLELSQHQYVEKALERH------GMADCRPVSTPMAQNQKHLKLPQAEIDPKPYQSA------LGSLMYAMLRTRPDLAFAVGALSQHAATPGKEHWHALMRVYRYLRGTSDRRLVYNGTAKEKHLLGYVDADWAADINDRRSVTGFVFLISGAAVTWSSKKQSSTAQSSTEAEYMAGAHGTKEAIWLRAFLSEIGQAISGSTPLLIDNQSAIALAKNPEFHNRTKHIAVRYHFIREKYDSGDITPEYVPTGNQVADVLTKGLAREKHE 1123          
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Match: A0A2S2NPY8_SCHGA (Copia protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NPY8_SCHGA)

HSP 1 Score: 173 bits (439), Expect = 2.760e-46
Identity = 115/298 (38.59%), Postives = 158/298 (53.02%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDKPPEPKPLGAVLLDIGTGVQESSSRRNANSTEC----RGMLGSLMYASTGTKLDIAYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQS-NDHCLEEFVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAAGEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHIGVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKFQRL 293
            ++D G LS  LGI++  +     + ISQG Y++ VL+R+       ++D  P   P       I T V  S    N  ST C    R ++G LMYA   T+ D++Y ++  +    +P    +   K + R+     D    +  QS N   LE FV ADWA H +DRKS T  IFK+ G   SW + +Q  +  S+TEA+Y+AA  A  E I+LR +L   G       TLYE+N+S I LS+  G H +TKHI +R H IRE V  GI+ LKY+ + NQ ADIL KGL   KF  L
Sbjct:  286 IEDCGILSYYLGIKIEHNIDKAELKISQGQYLKNVLRRF------NMLDCKPRSIP-------IETKVDLSI---NTLSTTCSQPYRQLIGCLMYAMLATRPDLSYCLNYFSHFQSNPEEVHWMYLKNVLRYIKGTLDYSIIYRKQSGNIPILEGFVDADWANH-KDRKSVTGYIFKIYGSIVSWSTNRQPTIALSTTEAEYMAASYATCEAIWLRSILKDFGVELFEPITLYEDNQSCIQLSQNPGHHRRTKHIDIRHHFIREKVEEGIVKLKYITSENQQADILTKGLPVSKFNHL 566          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32235.8682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9IUY0_PARCT6.200e-5039.32Retrovirus-related Pol poly from transposon TNT 1-... [more]
M5BWJ0_THACB1.150e-4938.70Rhizoctonia solani AG1-IB WGS project CAOJ00000000... [more]
A0A401H2X4_9APHY1.640e-4936.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060S8R4_PYCCI2.210e-4837.24Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A0S7JP25_9TELE5.420e-4837.63POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
A0A498M2F0_LABRO8.180e-4834.58Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9M6E1_PARCT1.640e-4633.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4S4L116_9AGAM1.680e-4636.92Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7NTQ9_9APHY1.740e-4636.08Integrase catalytic domain-containing protein n=1 ... [more]
A0A2S2NPY8_SCHGA2.760e-4638.59Copia protein (Fragment) n=1 Tax=Schizaphis gramin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 76..291
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 76..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32235contigH-paniculata_contig32235:1640..2593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32235.8682.1mRNA_H-paniculata_contig32235.8682.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32235 1634..2593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32235.8682.1 ID=prot_H-paniculata_contig32235.8682.1|Name=mRNA_H-paniculata_contig32235.8682.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=303bp
MKDLGSLSRVLGIEVRRDRPNGTMPISQGGYIREVLKRYVEVLIPGLVDK
PPEPKPLGAVLLDIGTGVQESSSRRNANSTECRGMLGSLMYASTGTKLDI
AYAVHQAARRMEDPSREGFSTCKRIFRHFSTVPDLGSTFGDQSNDHCLEE
FVHADWAEHVEDRKSTTRDIFKLNGGATSWCSRKQQLVTWSSTEAKYVAA
GEAGKEMIYLRDLLGSIGFGCRGSTTLYENNKSAINLSKGSGAHCKTKHI
GVRWHGIREWVRGGILALKYVQTGNQLADILAKGLSRIKFQRLRILLITA
CW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like