mRNA_H-paniculata_contig3223.8681.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: D7G089_ECTSI (Similar to 3-Dehydroquinate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G089_ECTSI) HSP 1 Score: 264 bits (674), Expect = 1.750e-83 Identity = 147/195 (75.38%), Postives = 157/195 (80.51%), Query Frame = 1
Query: 1 LQVTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTG---VTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADGSTKYLSELMAGDQV 576
+QVTCSDWTMIPAENLVSAAGGTPTRIA+E++E SQVQGAAFALQIGVDALLL P+PDLW AAVSAREQR P++ A G+ G G V L RVT REGGVGDRVCVDLIQSL AGEGMLVGSSAK+LALVHAETFETGFVPARPFR+NAGPVHSYALL DGSTKYLSEL AGDQV
Sbjct: 181 IQVTCSDWTMIPAENLVSAAGGTPTRIAVELSEPSQVQGAAFALQIGVDALLLGPDPDLWEAAVSAREQRG-------TDGPATGVLPAPADHGEGGAGGGLDVVALSTGRVTRTREGGVGDRVCVDLIQSLNAGEGMLVGSSAKMLALVHAETFETGFVPARPFRINAGPVHSYALLGDGSTKYLSELCAGDQV 368
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A6H5KAS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS3_9PHAE) HSP 1 Score: 209 bits (532), Expect = 4.620e-63 Identity = 136/251 (54.18%), Postives = 148/251 (58.96%), Query Frame = 1
Query: 1 LQVTCSDWTMIPAENLVSAAGGTPTRIALEV----------------------------------TESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTG---VTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPAR--------------------------------PFRVNAGPVHSYALLADGSTKY 546
+QVTCSDWTMIPAENL+SAAGGTPTRIA+EV +E SQVQGAAFALQIGVDALLL P+PDLW AAVSAREQR +G + S D G+ G G V L RVT REGGVGDRVCVDLIQSL AGEGML+GSSAK+LALVHAETFETGFVPAR PFR+NAGPVHSYALL DG TK+
Sbjct: 25 VQVTCSDWTMIPAENLISAAGGTPTRIAVEVGRVLVQLRLSVVLAALSASLSFVPTPTYRQNAMLSEPSQVQGAAFALQIGVDALLLGPDPDLWEAAVSAREQRGI------DGPATGALPSPADH-GEGGAGGGLDVVALSTGRVTRTREGGVGDRVCVDLIQSLKAGEGMLIGSSAKMLALVHAETFETGFVPARQGDFYFLCFFAAPEGFVARMRWWWRRGGIGTVPFRINAGPVHSYALLGDGRTKH 268
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A7M3ZCB2_9ARCH (3-dehydroquinate synthase II n=2 Tax=Candidatus Poseidoniales TaxID=133814 RepID=A0A7M3ZCB2_9ARCH) HSP 1 Score: 188 bits (478), Expect = 1.630e-56 Identity = 107/192 (55.73%), Postives = 127/192 (66.15%), Query Frame = 1
Query: 1 LQVTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTGVTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADGSTKYLSELMAGDQV 576
L V C+DW MIP ENLV+AA GT T+IA ++ Q+QGAAFALQ GVDALLL + ++W A QR A A S +A LD + L + GI GG+GDRVCVDL+Q L GEG+LVGSSA LL LVH ET + FVP RPFRVNAGPVHSY ++ADGSTKYLSEL+AGD+V
Sbjct: 7 LVVDCADWRMIPLENLVAAADGTATKIAASISNPDQLQGAAFALQRGVDALLLPDDAEMWGVAQELAAQRLADTTGA-----SEASAMVLD--------QQIELYPLEILGIEPGGMGDRVCVDLVQMLEVGEGLLVGSSASLLILVHGETLTSQFVPPRPFRVNAGPVHSYVMMADGSTKYLSELVAGDEV 185
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A2D5X3L4_9EURY (3-dehydroquinate synthase II n=3 Tax=Archaea TaxID=2157 RepID=A0A2D5X3L4_9EURY) HSP 1 Score: 188 bits (478), Expect = 1.240e-55 Identity = 107/192 (55.73%), Postives = 127/192 (66.15%), Query Frame = 1
Query: 1 LQVTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTGVTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADGSTKYLSELMAGDQV 576
L V C+DW MIP ENLV+AA GT T+IA ++ Q+QGAAFALQ GVDALLL + ++W A QR A A S +A LD + L + GI GG+GDRVCVDL+Q L GEG+LVGSSA LL LVH ET + FVP RPFRVNAGPVHSY ++ADGSTKYLSEL+AGD+V
Sbjct: 80 LVVDCADWKMIPLENLVAAADGTATKIAASISNPDQLQGAAFALQRGVDALLLPDDAEMWGVAQELAAQRLADTTGA-----SEASAMVLD--------QQIELYPLEILGIEPGGMGDRVCVDLVQMLEVGEGLLVGSSASLLILVHGETLTSQFVPPRPFRVNAGPVHSYVMMADGSTKYLSELVAGDEV 258
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A2E7SIA2_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E7SIA2_9EURY) HSP 1 Score: 188 bits (478), Expect = 1.240e-55 Identity = 105/192 (54.69%), Postives = 129/192 (67.19%), Query Frame = 1
Query: 1 LQVTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTGVTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADGSTKYLSELMAGDQV 576
L V C+DW MIP ENLVSA+ GT T+IA ++ Q+QGAAFALQ GVDALLL + ++WA A QR A A +S T + + L + +V GI GG+GDRVC+DL+Q L GEG+LVGSSA LL L+H ET + FVP RPFRVNAGPVHSY ++ADGSTKYLSEL+AGD+V
Sbjct: 80 LIVDCTDWKMIPLENLVSASDGTSTKIAASISNPDQLQGAAFALQRGVDALLLPDDEEIWAVAQELAAQR---LADATGADEASATVIEQE----------IELQSMKVIGIETGGLGDRVCIDLVQMLEVGEGLLVGSSASLLVLIHGETIASQFVPPRPFRVNAGPVHSYVMMADGSTKYLSELIAGDEV 258
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A0G4EXJ2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXJ2_VITBC) HSP 1 Score: 189 bits (480), Expect = 2.050e-55 Identity = 105/192 (54.69%), Postives = 132/192 (68.75%), Query Frame = 1
Query: 7 VTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGT-PSSRTASALDGVGKPQKGTGVTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADG-STKYLSELMAGDQV 576
+ C DW IP EN+V+A+ TPTRI VT++SQ+QG AF+LQ+GVDALLL P+ +W AA+ AR R GT P++ AS G +G+ ARV + +GGVGDRVC+DLIQ++ GEG LVGSSA LA VHAET GFVPARPFR+NAGPVH+Y L+ DG STKYLSE+ AGD++
Sbjct: 85 IDCDDWVQIPGENMVAASHQTPTRICAVVTDASQIQGLAFSLQLGVDALLLPPDQAMWKAALEARTTRG-------QGTQPTNAEASQPSAKGVASAHSGLRF--ARVVSVSDGGVGDRVCLDLIQNMRHGEGALVGSSAMRLAFVHAETIPAGFVPARPFRINAGPVHAYCLMGDGKSTKYLSEIQAGDEI 267
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A2E9BAK0_9ARCH (3-dehydroquinate synthase II n=1 Tax=Thermoplasmata archaeon TaxID=1906666 RepID=A0A2E9BAK0_9ARCH) HSP 1 Score: 184 bits (467), Expect = 5.240e-54 Identity = 102/192 (53.12%), Postives = 129/192 (67.19%), Query Frame = 1
Query: 1 LQVTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTGVTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADGSTKYLSELMAGDQV 576
L + C+DW MIP ENLV++ GT T+I +++ Q+QGAAFALQ GVDALL+ + ++WA A Q+ A + + T++ + G V LC VT I GGVGDRVCVDLIQ L GEG+LVGSSA LLALVH ET + FVP RPFR+NAGPVHSY ++ DG+TKYLSEL+AGD+V
Sbjct: 79 LIIDCADWKMIPLENLVASTDGTATKIVASLSDVQQLQGAAFALQRGVDALLIPDDEEMWAVAQELAAQKLAEKSGV------AETSAIIIGE--------VELCELEVTDIEMGGVGDRVCVDLIQMLEVGEGVLVGSSASLLALVHGETISSQFVPPRPFRINAGPVHSYIMMGDGTTKYLSELVAGDEV 256
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A2V3HYA2_9EURY (3-dehydroquinate synthase II n=2 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2V3HYA2_9EURY) HSP 1 Score: 184 bits (466), Expect = 8.640e-54 Identity = 106/192 (55.21%), Postives = 127/192 (66.15%), Query Frame = 1
Query: 1 LQVTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTGVTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADGSTKYLSELMAGDQV 576
L +TCSDWTMIP ENLV+AA G+PTRI EV E +Q+QGAAFALQ GVDALLL + LW +R AA A G A D + + V L + +T + G+ DRVCVD++Q L GEG+LVGSSA L LVH ET E+ FVP RPFRVNAGPVH+Y LLADGST+YL EL AG++V
Sbjct: 84 LLLTCSDWTMIPLENLVAAAEGSPTRIVAEVDELAQLQGAAFALQRGVDALLLPSDDALWEEGERLAAERLAALTGAEEG--------ASDLLEQE-----VLLESVTITSVEVSGLADRVCVDMVQLLEVGEGILVGSSANALCLVHGETLESAFVPPRPFRVNAGPVHAYTLLADGSTRYLCELTAGEEV 262
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A2D7L867_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2D7L867_9EURY) HSP 1 Score: 179 bits (455), Expect = 1.000e-53 Identity = 98/188 (52.13%), Postives = 123/188 (65.43%), Query Frame = 1
Query: 7 VTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTGVTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADGSTKYLSELMAGD 570
V CSDWTMIP EN+V+AA G+ TR+A ++++ + GAAFALQ GVDALLL + +LWAAA + +RN+ + P V L A VT I GGVG+RVCVDL + L GEGML+GSSA L L+H ET + FVP+RPFR+NAG VH+Y L+ADGST+YLSEL AGD
Sbjct: 54 VRCSDWTMIPLENIVAAAAGSGTRVAAAISKAVDLNGAAFALQHGVDALLLPADKELWAAAKTVLGERNSQNSEEPTAV--------------------VELLLADVTSIESGGVGERVCVDLTERLALGEGMLIGSSANALVLIHGETVPSEFVPSRPFRINAGAVHAYCLMADGSTRYLSELEAGD 221
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Match: A0A2V4CUB2_9EURY (3-dehydroquinate synthase II n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2V4CUB2_9EURY) HSP 1 Score: 183 bits (464), Expect = 1.640e-53 Identity = 105/192 (54.69%), Postives = 124/192 (64.58%), Query Frame = 1
Query: 1 LQVTCSDWTMIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLWAAAVSAREQRNAAFAAAPNGTPSSRTASALDGVGKPQKGTGVTLCAARVTGIREGGVGDRVCVDLIQSLGAGEGMLVGSSAKLLALVHAETFETGFVPARPFRVNAGPVHSYALLADGSTKYLSELMAGDQV 576
L + C DWTMIP ENLV+AA G+ TRIA + E SQ+QGA FALQ GVDALLL E +W AA +R A DGV + Q V L + + GGVGDRVCVDL+Q++ GEG+L+GSS+ L LVH ET E+ FVP RPFRVNAGPVHSY LLADGST+YL EL AGD+V
Sbjct: 77 LLLDCLDWTMIPLENLVAAAQGSGTRIAASIHEESQLQGATFALQSGVDALLLPAEKSMWDAAELLAAERLAETGG---------VVEESDGVLREQ----VELVPLEIISVTPGGVGDRVCVDLVQNMELGEGLLIGSSSNALCLVHGETIESDFVPPRPFRVNAGPVHSYILLADGSTRYLCELEAGDEV 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3223.8681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3223.8681.1 >prot_H-paniculata_contig3223.8681.1 ID=prot_H-paniculata_contig3223.8681.1|Name=mRNA_H-paniculata_contig3223.8681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp MIPAENLVSAAGGTPTRIALEVTESSQVQGAAFALQIGVDALLLRPEPDLback to top mRNA from alignment at H-paniculata_contig3223:9074..10668- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3223.8681.1 ID=mRNA_H-paniculata_contig3223.8681.1|Name=mRNA_H-paniculata_contig3223.8681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1595bp|location=Sequence derived from alignment at H-paniculata_contig3223:9074..10668- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3223:9074..10668- >mRNA_H-paniculata_contig3223.8681.1 ID=mRNA_H-paniculata_contig3223.8681.1|Name=mRNA_H-paniculata_contig3223.8681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at H-paniculata_contig3223:9074..10668- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |