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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 87.8 |
| Seed ortholog evalue | 9.3e-15 |
| Seed eggNOG ortholog | 2880.D8LFP7 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008272,GO:0008509,GO:0015075,GO:0015103,GO:0015116,GO:0015318,GO:0015698,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358 |
| EggNOG free text desc. | potassium ion transport |
| EggNOG OGs | 2QPZM@2759,COG0471@1 |
| COG Functional cat. | P |
| BiGG Reaction | iRC1080.CRv4_Au5_s10_g542_t1 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 1 |
| Model size | 907 |
| Cds size | 903 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32213.8676.1 >prot_H-paniculata_contig32213.8676.1 ID=prot_H-paniculata_contig32213.8676.1|Name=mRNA_H-paniculata_contig32213.8676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=301bp
MFQHTQADADGVNDTSTVESLVSGSRDTAATALGDEVVRAGDTMVLSCTR
DQMVRFQGSMVSAGTRGLRILGVRARTLPRQGTTVFELVLSGRSEFLSRS
PPRDNAMFAAQYGCNVMGFRLKGVSFPRDADWMKTMVSRRPLDEDHVDMP
ITRDCVIGGGDDERVSDKAVDWAAKNVLIFNDGLKNEVEKRKTAGVTEGE
VVDTYSLEGNDGAFGGDSCGGGGGGGSDGSVYLLSSSLSPHLPPFLKRGQ
RGTVTNNGEKQSSSTDMDRRRPKSRSCGGSENDDDDGCADDDKVGVSAIE
R back to topmRNA from alignment at H-paniculata_contig32213:762..1667+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig32213.8676.1 ID=mRNA_H-paniculata_contig32213.8676.1|Name=mRNA_H-paniculata_contig32213.8676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=906bp|location=Sequence derived from alignment at H-paniculata_contig32213:762..1667+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCATGTTCCAACATACCCAAGCCGACGCTGACGGTGTCAACGATACCAG
TACAGTCGAAAGTTTGGTATCAGGCTCCCGCGACACGGCCGCGACGGCAC
TAGGGGACGAAGTGGTGCGTGCCGGGGACACGATGGTGCTCAGTTGCACC
CGTGACCAAATGGTGCGCTTCCAGGGATCGATGGTCAGCGCAGGCACGAG
AGGGCTTCGAATTCTCGGCGTCCGCGCGCGAACCCTGCCGAGACAAGGGA
CTACCGTGTTCGAACTGGTCCTTTCGGGACGATCCGAGTTTTTGTCCCGG
TCTCCTCCCCGCGACAACGCGATGTTTGCCGCGCAGTACGGCTGCAATGT
CATGGGATTCCGCTTGAAAGGCGTATCTTTCCCCCGCGATGCCGACTGGA
TGAAGACGATGGTGAGTCGCCGGCCCTTGGATGAGGATCATGTGGATATG
CCTATTACGCGTGACTGTGTCATTGGTGGTGGTGACGACGAGCGAGTATC
CGACAAGGCTGTAGACTGGGCTGCAAAAAACGTGTTGATCTTCAACGACG
GGCTTAAAAACGAGGTCGAGAAAAGGAAGACGGCAGGTGTAACAGAAGGA
GAAGTGGTGGATACGTATTCGCTGGAAGGAAACGACGGTGCTTTTGGTGG
CGACAGTTGCGGCGGCGGCGGTGGCGGCGGCAGCGACGGCAGTGTTTACC
TGCTCTCTTCCTCCTTGTCGCCGCACTTGCCACCATTTCTGAAGAGAGGT
CAGCGCGGAACAGTTACGAACAACGGGGAAAAACAAAGCTCGTCGACAGA
TATGGACCGACGACGACCAAAGAGCCGCAGCTGCGGTGGCAGTGAGAACG
ACGATGATGATGGTTGCGCTGATGATGATAAGGTCGGGGTTTCTGCAATC
GAGCGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig32213:762..1667+ >mRNA_H-paniculata_contig32213.8676.1 ID=mRNA_H-paniculata_contig32213.8676.1|Name=mRNA_H-paniculata_contig32213.8676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1806bp|location=Sequence derived from alignment at H-paniculata_contig32213:762..1667+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCCAACATACCCAAGCCGACGCTGACGGTGTCAACGATACCAGTAC
AGTCGAAAGTTTGGTATCAGGCTCCCGCGACACGGCCGCGACGGCACTAG
GGGACGAAGTGGTGCGTGCCGGGGACACGATGGTGCTCAGTTGCACCCGT
GACCAAATGGTGCGCTTCCAGGGATCGATGGTCAGCGCAGGCACGAGAGG
GCTTCGAATTCTCGGCGTCCGCGCGCGAACCCTGCCGAGACAAGGGACTA
CCGTGTTCGAACTGGTCCTTTCGGGACGATCCGAGTTTTTGTCCCGGTCT
CCTCCCCGCGACAACGCGATGTTTGCCGCGCAGTACGGCTGCAATGTCAT
GGGATTCCGCTTGAAAGGCGTATCTTTCCCCCGCGATGCCGACTGGATGA
AGACGATGGTGAGTCGCCGGCCCTTGGATGAGGATCATGTGGATATGCCT
ATTACGCGTGACTGTGTCATTGGTGGTGGTGACGACGAGCGAGTATCCGA
CAAGGCTGTAGACTGGGCTGCAAAAAACGTGTTGATCTTCAACGACGGGC
TTAAAAACGAGGTCGAGAAAAGGAAGACGGCAGGTGTAACAGAAGGAGAA
GTGGTGGATACGTATTCGCTGGAAGGAAACGACGGTGCTTTTGGTGGCGA
CAGTTGCGGCGGCGGCGGTGGCGGCGGCAGCGACGGCAGTGTTTACCTGC
TCTCTTCCTCCTTGTCGCCGCACTTGCCACCATTTCTGAAGAGAGGTCAG
CGCGGAACAGTTACGAACAACGGGGAAAAACAAAGCTCGTCGACAGATAT
GGACCGACGACGACCAAAGAGCCGCAGCTGCGGTGGCAGTGAGAACGACG
ATGATGATGGTTGCGCTGATGATGATAAGGTCGGGGTTTCTGCAATCGAG
CGGATGTTCCAACATACCCAAGCCGACGCTGACGGTGTCAACGATACCAG
TACAGTCGAAAGTTTGGTATCAGGCTCCCGCGACACGGCCGCGACGGCAC
TAGGGGACGAAGTGGTGCGTGCCGGGGACACGATGGTGCTCAGTTGCACC
CGTGACCAAATGGTGCGCTTCCAGGGATCGATGGTCAGCGCAGGCACGAG
AGGGCTTCGAATTCTCGGCGTCCGCGCGCGAACCCTGCCGAGACAAGGGA
CTACCGTGTTCGAACTGGTCCTTTCGGGACGATCCGAGTTTTTGTCCCGG
TCTCCTCCCCGCGACAACGCGATGTTTGCCGCGCAGTACGGCTGCAATGT
CATGGGATTCCGCTTGAAAGGCGTATCTTTCCCCCGCGATGCCGACTGGA
TGAAGACGATGGTGAGTCGCCGGCCCTTGGATGAGGATCATGTGGATATG
CCTATTACGCGTGACTGTGTCATTGGTGGTGGTGACGACGAGCGAGTATC
CGACAAGGCTGTAGACTGGGCTGCAAAAAACGTGTTGATCTTCAACGACG
GGCTTAAAAACGAGGTCGAGAAAAGGAAGACGGCAGGTGTAACAGAAGGA
GAAGTGGTGGATACGTATTCGCTGGAAGGAAACGACGGTGCTTTTGGTGG
CGACAGTTGCGGCGGCGGCGGTGGCGGCGGCAGCGACGGCAGTGTTTACC
TGCTCTCTTCCTCCTTGTCGCCGCACTTGCCACCATTTCTGAAGAGAGGT
CAGCGCGGAACAGTTACGAACAACGGGGAAAAACAAAGCTCGTCGACAGA
TATGGACCGACGACGACCAAAGAGCCGCAGCTGCGGTGGCAGTGAGAACG
ACGATGATGATGGTTGCGCTGATGATGATAAGGTCGGGGTTTCTGCAATC
GAGCGG back to top
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