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Homology
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: A0A6H5JW68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW68_9PHAE) HSP 1 Score: 301 bits (771), Expect = 6.180e-94 Identity = 150/287 (52.26%), Postives = 188/287 (65.51%), Query Frame = 2
Query: 728 ELLSIPTNHPAWDYLLLDVGRGVGPSYLMSSGSWDGFMQEAARNVLAVFRRNFHEFPRPGYDKIPTCAFDPEVLNIAMHIRLGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMGQPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQCLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTAGLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLLG 1588
E L ++PAW+ LL + P Y + GSW+ +EA R VL F+++FH FPRP + P CAF L+IA+H+RLGDR+ + D YF +LE FM++VA GQ P+FH+FSET CP+A+ G FEEFPKWPV M+QV C+ P +C EK AG SC P RSGIF V G+ M LHVG DV NDL+CM A+GVLMGCSTFGQ+AG L+ G+RFFST C G +T YKL+PP+A+A G WVPV GSW DPV+ SE IL L+ LLG
Sbjct: 4 EQLHDEQSNPAWNQWLLMMNLMTAPRYFSAVGSWNARKREAVRTVLHTFKQSFHTFPRPWNNIQPECAFSQSKLDIAIHVRLGDRKDSLNDD--SYFDYLEDFMETVASAAIARGQDHPVFHIFSETHSRCPSAENGAFEEFPKWPVEMDQVSTCMEATTPEECPEKDAG-APSCNPTRSGIFAVDGREMNLHVGLDVQNDLSCMANANGVLMGCSTFGQVAGVLSKGIRFFSTECAGWRTTIQYKLIPPMAIAGRGHMWVPVSGSWHDPVIASESILGASLDLLLG 287
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI) HSP 1 Score: 288 bits (737), Expect = 6.670e-80 Identity = 159/396 (40.15%), Postives = 220/396 (55.56%), Query Frame = 2
Query: 422 MRTISAWMFAAALGCDWVDPEMSSTVATPSVNGTTLYCHPKVQ-KRKKRGMGKAV-DPSHVS---CSAVNWVDFFGFGKESVELPLGKPNKTLTVTTAKIA-VRRARKELLSIPTNHPAWDYLLLDVGRGVGPS-YLMSSGSWDGFMQEAARNVLAVFRRNFHEFPRPGYDKIPTCAFDPEVLNIAMHIRLGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMGQPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQCLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTA-GLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLL 1585
MR ++A +FA +GCDW+ P +G ++YCH ++RG G A D + + CS VNW ++F SVELP + + T++ + A KE + ++ WD L + + + S +L S GSWDG+ +E R VL FR NFH+ PRP Y+ P C ++ LN A+H+R+GDR + G + YF LE FM +V V + Q PMFHVFSE PCP + F EFP WPV +QV C P + E + P R FRV G+ + LH+G + A L+CM+ ADG+LMGCSTFGQ+AG L G+ FFST C G P K++PPLA+AE G+ WVP+ GSWRDPVL ++ + L+ LL
Sbjct: 3 MRHLAAKIFAEEVGCDWLTPSQWGMPVAGDGSGASVYCHSAATYDEQRRGFGNATKDEAEIMVHRCSVVNWPEYFNLNASSVELPANCTFRVVEADTSRNHDLEMALKETDANGFDNLGWDRLKIVLRQPHASSNFLASLGSWDGWKREVVRKVLRQFRENFHQSPRPWYNDEPECGYEESELNFALHVRMGDRRELEGVT-PEYFSLLEGFMATVTQAVVEREQAAPMFHVFSEALYPCPFPENATFTEFPFWPVERDQVSVC-----PRNAAE------QDGPASRPDTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDGISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHVFSAVLDELL 386
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: D7G5J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J8_ECTSI) HSP 1 Score: 240 bits (612), Expect = 1.350e-71 Identity = 114/210 (54.29%), Postives = 146/210 (69.52%), Query Frame = 2
Query: 971 LGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMGQPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQCLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTAGLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLLGNNAR 1600
+GDR + S YF +E M++VAD ++ G P P+FHVFSET PCP+ TGLF+EFP WPV ++++ +CL P+DC EK AG C P R+GIFR+R K++ LHVGSDV N+++CMIQADGVLMGCSTFGQIAG LT G+ FST C G+ TP Y+ +PPLA+AE G WVP++GSW DPVL S I L+ LL +R
Sbjct: 1 MGDRRAFYDGSLQ-YFHNVELIMETVADEFRERGLPEPLFHVFSETLSPCPSTVTGLFDEFPIWPVELDKIEECLAAATPIDCPEKQAGTF--CTPKRAGIFRIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISLFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLTSRSIFSAALDTLLVAKSR 207
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: A0A6H5L814_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L814_9PHAE) HSP 1 Score: 197 bits (500), Expect = 1.000e-54 Identity = 105/239 (43.93%), Postives = 138/239 (57.74%), Query Frame = 2
Query: 908 YDKIPTCAFDPEVLNIAMHIRLGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMGQPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQ--------CLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTAG-LRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLLGNNA 1597
Y+ P C ++ LN A+H+R+GDR + G + YF LE FM +V V + Q PMFHVFSE PCP+ + F EFP WPV +QV L+ E C+ A + P R G FRV G+ + LH+G + A L+CM+ ADG+LMGCSTFGQ+AG L + FFST C G P K++PPLA+AE G+ WVP+ GSWRDPVL ++ I L+ LL A
Sbjct: 14 YNDEPGCGYEESQLNFALHVRMGDRRELEGVT-PEYFSLLEDFMATVTQAVVEREQAAPMFHVFSEALYPCPSPENATFTEFPLWPVERDQVDLNVSLHRLFSLSNEKVSVCLRNAAE--QGAPASRKGTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDRISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHIFSAALDALLKRKA 249
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: A0A6H5JJ94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ94_9PHAE) HSP 1 Score: 100 bits (248), Expect = 2.920e-21 Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 2
Query: 1175 NQVPQCLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTAGLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLLGNNAR 1600
+Q+ +CL P DC EK AG C P R+GIFR+R K++ LH+GSDV N+++C+I+ADGVLM + +PPL +AE G WVP++GSW DPV S I L+ LL +R
Sbjct: 20 DQIEECLAATTPQDCPEKQAGTF--CTPKRAGIFRIRYKSIVLHMGSDVQNEMSCIIEADGVLM--------------------------------RSIPPLTIAEKGHLWVPIEGSWHDPVWSSRSIFSAALDTLLVAKSR 127
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: D7G5J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J9_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 7.540e-17 Identity = 52/169 (30.77%), Postives = 80/169 (47.34%), Query Frame = 2
Query: 182 VDAEQACSLFMQSSASSSSSWRLEDCIEVWTAWSTTYAFDTTPRLENRDVLRDTASELKRLETRCVVQPGGSNDGAGSTAMRTISAWMFAAALGCDWVDPEMSSTVATPSVNGTTLYCHPKVQKRKKRGMGKAVDPSHVS--------CSAVNWVDFFGFGKESVELPL 664
V+ AC+ F + S W EDC+ VW ++ T PR+ + D+ DTA EL+R + C+V + DGAGST +R ++ W+F+ +GCDWV P+ +YCH + G +DPS C ++W+ +F F SV P+
Sbjct: 98 VEPADACADFAPGQYTGSG-WTPEDCLHVWNDFNDTVWEQFHPRMPDADLWIDTAEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGKKFVGGRSGTAVMYCH-------RAGTAAEMDPSKTKEELKAMRRCVIIDWLSYFQFDIPSVPSPV 258
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 288.9 |
| Seed ortholog evalue | 4.9e-75 |
| Seed eggNOG ortholog | 2880.D7FRT1 |
| Hectar predicted targeting category | signal peptide |
| EggNOG free text desc. | fatty acid biosynthetic process |
| EggNOG OGs | COG0318@1,KOG3628@2759 |
| COG Functional cat. | IQ |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 7 |
| Model size | 2029 |
| Cds size | 1614 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3220.8673.1 >prot_H-paniculata_contig3220.8673.1 ID=prot_H-paniculata_contig3220.8673.1|Name=mRNA_H-paniculata_contig3220.8673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=538bp
MNPRRLKVVPHLMKENLARSGTSLLPLSALLLLLLVVWSSSSSVLATSRT
SGIVDAEQACSLFMQSSASSSSSWRLEDCIEVWTAWSTTYAFDTTPRLEN
RDVLRDTASELKRLETRCVVQPGGSNDGAGSTAMRTISAWMFAAALGCDW
VDPEMSSTVATPSVNGTTLYCHPKVQKRKKRGMGKAVDPSHVSCSAVNWV
DFFGFGKESVELPLGKPNKTLTVTTAKIAVRRARKELLSIPTNHPAWDYL
LLDVGRGVGPSYLMSSGSWDGFMQEAARNVLAVFRRNFHEFPRPGYDKIP
TCAFDPEVLNIAMHIRLGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMG
QPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQCLTVEPPLDCI
EKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGC
STFGQIAGTLTAGLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKG
SWRDPVLLSEEILRVELENLLGNNARNIDNFNIRPDD* back to topmRNA from alignment at H-paniculata_contig3220:8964..18509+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3220.8673.1 ID=mRNA_H-paniculata_contig3220.8673.1|Name=mRNA_H-paniculata_contig3220.8673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9546bp|location=Sequence derived from alignment at H-paniculata_contig3220:8964..18509+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCTGCAGTCAACCTTACCGAGATGAATCCACGGAGGTGAGAGGGTTGCT
CGCAAAGTCGAATTTAATGTGGTAGAGACAGGAAGTCATTGTGCCTTGTT
ATACTGAATGTTACAGAAAGGCGTTCACTACACGGTGTGCTTCATTCTCA
GACAGCAGAGGTGCTGGCACAGTTCGAAAGATCTTGAACATTAGACCGCC
ATACTCCGTAGCTGAACACCAATCGTTTGTTTGGCATGCACATCGGCTGT
CTCGTGGAATCACACTGTCAACCCTGAGAGACTTCGCGCCAAGAATGCTA
GCTGATTTCATTTCGCCAGTACAAGCGTCAAGTACAACTATTTTATTACC
TTATCCTTGTAGAGAGTTTCGGGCACACAGTTGCCGGTTTTGAGAATTAG
AACGTAAAATATTTGAACACATGAAAAATAAAATAACAATTTGAGTACAC
ATATTAGTATTACTGCAGGGGCCATCACGTTGCTAACACTCCTTGCTCAA
TTTAAGTTGCTCGAATATTTTACATTCTCATTCTCAACTCTCTAATCATT
AGCTATGAACATAGAGATCCACTGTTACACAGAACATATTCTACATCTAC
ATGATCAATATTATTGCCTTCTGACAATTGCAGACTCAGCATGGGCTTTG
GGAATTTTCAAAAGTAACCTCACAAAGTAAGCAAAATGAACTGCAGGCGA
AACAAGAAAGAATCTAATCTAACAATAACCACGCATTATACTCGAATATC
CGACCTAGAGTAAAACCTCTTGGGCATCCTATTTAGTACTTCTGGGTCTC
TGCACCCTGTGTGACAGGAGTTTACTGCCAGCTCATCGTATTAATGCGAT
GAATACCTAACGGGTTATAAGACAGTGCTGAAGATAAAGTACTACTGTAT
GCAATAAGACACTCGACACTAAGATACCTTATAGATATAGCATGGTATCT
GACAGTAATATCCTCGCCATTCAAACAAATACACATGCAACCTAAACACG
TGAGGTAAGAACGCATAAGAATCACCCAAACGTCGACTACAAAATATGCT
ATGGGGGCGTAATTACCTCTTGGCGATTAGCGGGTGCGAACGATTGGTGG
ATTGAGGTACATATACCCTGGCCATTGAGTCTAGCGAGGAGGTGAACAAT
ACACATAGGGATGGCGCCAACGACAGCAGCAAACCCCCGCTGGGCAATGT
ACATGGACAAAGATATATTTGGCCACTGCAGTAAACCAGAGGTGTTTTCT
TGGGCGTCGCTACTACGCCGATGGAATCACGTGTCCCCAAACAAGGTAAA
TGTCTCATATTTGCGGGTTGTCAGAGGGGTCCCGAAATATGACGAATGGA
GCCCTAATTTTGTACTTCTTGAGAATGTAACGAGAAAAGAGTGCAGCGGG
AACACTAGCGAGCAGAGTACCGTTGGAGGCGTGGCGATACTGGCCATACC
CCCCTCTAGTGCCGCCCCCCGTCTGGGATTTTTGACTTTAACCCCCTAGC
GCGCCACCCACATGGGATTTCTGCTCCAGCAGGAATTATCAGCTATAGTG
CTGTCTAGATCCAGTAAGTAAATATAGGTTTCATGCTTGGACAGGGACAC
AGGATCTCTCAAGTGGCGCGGTACGGTTTATACAGTTGCACATCTTGGGG
GGAAACACCTAGGTCCTAGGGGTATGTGCCGAGCGATGCGAGGCCCTTCG
CACCAGACTTGAACTGGCTGTTTTCAATGTTGACTATCTGAATACTCGTG
TTTGGTATACATGTATCATCATAAACTTGTGGCTGACTGGGGTCAAAGAG
TTATTGGGTTTATATTCTGTAATGTGATTACAGTTCATCAGCCAGAATCA
TGGGAGGGCAGCGCTCCGAGAATGTCTTTGTACTTGTCAAAGCAGCGCAG
TACGTTGAACATAGGCTGAAGGCGTGCGTCAGTTTTTGCAGTACCTACAC
CTGCTGCACCACACACGAAGACTCCTCCCTTGCTGAGAGAGGGCAATGCC
GTCAGCTATTCTTCCCGTCTTTTAAGTTTGTGTTGCTCGTCGGTTGCCGA
GCTGCGTATTTCCTCCTTCTGCCAACACTCGCAGATTCAGAGCCGTATCG
AGCCCGACGAAGAAGAACCTCTATGTTTTCTCGCAATTGAACACCATTAT
TGCTGTGTAATTTTCACAAGGAGCTTCCCCTCCTACCCCCTCTTCCCCCC
GGCCAACGCTTGTAGGCTCAAAGTGGTACCGCACTTGATGAAAGAAAACC
TGGCTAGGTCCGGGACTTCGCTGCTGCCGCTATCCGCCTTATTGCTCTTG
CTTCTCGTGGTTTGGTCATCGTCGTCATCGGTGCTGGCAACAAGCCGAAC
GAGTGGAATCGTCGACGCCGAACAGGCGTGCTCACTGTTTATGCAAAGCT
CTGCGTCATCATCGAGCTCGTGGCGATTGGAAGACTGCATTGAAGTTTGG
ACGGCGTGGTCTACCACATATGCGTTCGACACGACGCCGCGATTGGAGAA
CCGTGACGTTTTGAGGGATACCGCGAGCGAGTTAAAGCGATTGGAGACGC
GGTGTGTGGTCCAGCCAGGCGGATCTAATGACGGCGCCGGGAGCACCGCC
ATGAGAACCATCTCCGCTTGGATGTTCGCTGCGGCACTAGGTGAGTTTAT
TTCATCATCGCAGACCGAGCATTCGAGCAGCGTTGGGGTCTATGGTTCCT
ATTCGACCTTTACCTCACCCCACGCTGTATTGTTGGGCTTGTCCTACGCG
CTGATGGTATACATTACTGAAGCAATCTGATTCTGCGAGAGGTGCCGGTT
TCAGCGAAGCCGATTGCTTGCTTTGAACACAAATCCAGTCGCTCTTTTGG
GTTCGCTGATGATGTATTTTTGAACAATACGGACACAGGCGGATATATCC
ACTACCTGCGCTTGTTCAACTCCAAATGATTTGGTGGACGGCCGATTGAT
GTTGCGGTACTGCTGCCACGAAACTTGAACGTCGGCAGAAACCACCCGCT
GACTAAGTAGACACCGTTGGACAACTTTCCGTCCGCTAAATACAGGATGC
GATTGGGTCGATCCCGAGATGAGCAGTACCGTCGCTACGCCGAGCGTCAA
CGGTACCACATTGTACTGTCACCCAAAGGTTCAGAAGAGGAAAAAGAGAG
GCATGGGGAAAGCGGTCGACCCGTCGCATGTCTCCTGCTCCGCTGTAAAC
TGGGTCGACTTTTTCGGGTTCGGCAAAGAATCCGTGGAGCTGCCGCTCGG
GAAGCCGAATAAGACCTTGACGGTGAGCCTCTGCTCCCGCCCGCCCGTAG
ACGCATTGGTTCTAGTCGGCCATGTTTATTTGAACTCCGTTGTCGTTAGC
AGATTTTCTAGCTATGTAGGGCAGGTAGTTCGTCGCTGTGCGACACTAGT
TTGAACGCTTTTCTGGTGGTGTAGGATCGGGTAGCCTGTCTTCACACTGC
TCCGTGCGCTGGTGCGTTCAGAGGACTCCTCAGCTCCTCATCAGGAGATA
CCTTTAACAATTTATGCTTCGGTGGCATGATAACACCGCCACCCTCTTGA
AAGCGGGCACTGAGCGAAATTCAACGACTTAACGTTCTGGTGGAAGATGA
TGAGTGCGTGCATCATGCTACCCTCGCAGGAACTACTTCCCGATGTGGTA
CCGGCGTGGCCATAAGACTTATCATGAACACCTCCACTCGTATGTGGACT
TTCACTCTCCTCGATGCCGAAGGTTACAACCGCAAAGATCGCAGTCCGAA
GAGCTCGGAAGGAGCTGCTATCAATCCCCACGAATCACCCCGCGTGGGAC
TATTTGCTGCTGGACGTGGGCAGGGGTGTAGGTCCTAGCTATTTGATGTC
TTCGGGTTCTTGGGATGGGTTTATGCAGGAGGCTGCTCGCAATGTCCTGG
CGGTGTTCAGGAGAAATTTTCACGAGTTTCCACGTCCAGGGTGAGAATGA
ATCAACCGCGCGCATTTTTTTTTGCTCTCTTGCGAACACACGGAATGAAA
CGCGCGTAGGCTGCACTGAGACAGATCGGGCCGCGTGATCATCATTATGT
TACGCCATGTTTGAACAGTCATATTGAAATACGGGCATTTATACTGAACG
TTGCTCGTTGTGAATATTGGACGTTTATTTTGAAATTTTAATTTCAAGAT
GGACATCTCTTCACTGTGAAGTTCGTATGTACATTGCATGTCTACGTTAA
ATGCAAACTATGAATATTCAGATTGAATGTCTACACTAAATGTGAGACCA
TAAGGAAATGCTCTGGGAAAAATCCGTGGATCCCGGAAGTGAAGGTTCAA
AATCTACAGTAAAAATTGAGCCTTAACCCTAATCCGCCAATCCTTTTCGT
CGTAGGGAGAGCCTATCACGTCCCTAGCCTAATATTTCTATTGGCACTAC
ATTTGACCCAACTGCATTGGCAGCCTTTCATGCGGTACTTATGAATGCAA
GTGCCATGTGCTAGTAGAATAGTTCCTATGTGCTCTGCGGTGATGACGGA
CACTAGACAAATCGCTTACCCACCGCGCTCTTTTTGTTTTGGTGGTAACT
TTGCTCGCGAAGAGTGGGATCTTTTTTGGAGGCCATGCACGAAGCAACCT
GATTTGGCTTATCCATTTTCATTATATATTCTCAGTCTTATTTTTAATCA
AAACGTAGCTGCACGGCGCTAAGCCCCTCAACCCTTTCTCAAATCAAAGA
TCCGGGCTGCGGGCGCGGGGGGGGGGGAATGTTGCAAGTTTTCAGTCGAT
TTGTGGAGGGGCTAATTAAAATGTGTTTTCCGCCTGACACAGCATGGGCA
TTGCCAATCGCCCAGTTTGCACCTTTGGGAATCATGAACATATAGCATCA
TATAGGTTTTGATTTGAAGTTTTGTTTTAGCCGTTTTGGTGGAGCGGCGC
TTGTTAAACACCCCCACCATAGCCCTTCTCCAAAACACTGTCTACTCCTA
CTGACAGGCCCTCTGCCCCCACTCCCTTCTCCCCCCCGCGCGCACACCTC
CTTTGCACCCCTGCCGTGACATCGCACGTTATAGGTATGACAAGATCCCA
ACGTGTGCGTTCGATCCCGAGGTCCTCAATATCGCGATGCACATTCGGTT
GGGCGATAGGGAGCAGTACATAGGGGACAGTTTCTCGGGGTACTTCAGGT
TTCTGGAGGCGTTTATGGACAGCGTAGCGGATATTGTGCAGGACATGGGA
CAACCACGCCCAATGTTTCACGTGTTTTCGGAGACTGCAAAGCCGTGCCC
GAATGCGAAGACGGGGCTCTTCGAGGAGTTCCCCAAGTGGCCTGTGGTTA
TGAATCAGGTGTGGCCTACACGGAGTAGGGCTACGGTAGAGAGGGAATAT
TTTTTTCGACGAGCGCTGATCTGCAAATCGGGTAAGAACAAGTTCCAAAT
CAAAACTTCTTCAATGACATACGTTCACGCATCCCCAAGGATGTACAGTG
CGCAATTCAGAATGACCGTACTGTTTGAGCGGGGAAATATTTGCCTAGCC
GCTTTGTGATTTGCCTCCAAACTGCAGACAACTCGGCCCAAGTGTCCCCC
CTCCTACCGTAGCCTGACTCTACATAACTTCCAAATGCAACACCTTTGTG
ACTTGGCGGGATTTCAGAGTCCTAGGACACTTTCACCCGTATTTCGAGTG
CTCCGTCTAACTGCGGTAGATTTTTTTCCCCGAAGACCGGTATCCCTGCT
ATCTCGCGTGTTATTGGGCCGGGTTGTGATGAAGTCCTATAACTATAACG
TGTATCCCTCGCGGATGATATGCTGGTGAGCTGAGTTGACCGCCCTGCTG
CTTTTCCGCATCCAAACTGATGATGATGCTGGCTGTTTAGTCGAAAGATT
TGCGGCGTATGGTCAATATGATAATATCGCAACAAAAAAACGAACGGCGC
ACGGGGTAGTTTTAAATACCCCATATCCGCGCCAATCTCACGCTGCCCAT
ATGCGCTGCTGACGTTCGCTACAAATTTCTACCGCAACATGTCTACAACG
CTTTTTTTTATGAGAATATGCAATTTTCAAATTATTTCAAGTCAGTGCCG
AGGCGCAAAAATATTTTATCGCCCCATTCGATCGATTTTGTCCAAGTTCG
CCAATCGAGCGATTCCTAATAGCTGGGGATGAACCGTCTTATCTCCAACC
GGAGATGGTATTTTGTAAATAAACAAGGCTGCTTGCTGTTGTGGTAACCT
TTTTTTGTAGTTTACGTCCAAACAGGCCAAACCCCGATTCTACGGTGGGC
GTGAGATGTGCCCATGAACCCTCTTTTCCCTGGAATACGCCATGACTGAC
CCAATTTGTAAAGTGCATTATTCCGCTTCGGCGAGCTACGACGCTTCAGG
CATCGATACATATTTTGACATGCGGTGGCCGTGAAGCCCATGGTACGTAC
GTTTCTAACTGGCCATCCTTCACCCGGCTAACCGTCGCGTTTCCGTCGGG
CCCCGCGCTATGCACCGATTATGACAAATGAAAGCAGGTACCTCAATGCC
TCACTGTTGAACCGCCGCTGGATTGTATAGAGAAGGTAGCTGGATTGGTA
GAGTCCTGTCCACCTTACCGGTCCGGGATCTTCCGTGTTCGCGGAAAAAA
TATGACTCTTCACGTCGGCAGTGATGTCGCCAATGATTTGGCATGTATGA
TCCAGGTGAGTTAATCGCGCGAGAAAGCTTATTAGGCGCAAGGGAGAAAG
GAAGGGGGGGAGGGGCAGGTTGAACTCTAATGGCAAAGAGAAACTACGAA
CGAACAATCATTCATGTTTTCCCCATCTGATGATGCACACGTGAAAACAT
ATAATGAACATGAAAAGTGCGATACAATATGACTAGCTCAAGGGTAAGAT
GTAGGAGAACATATAGCAAAATCTGTCCATGTGTATCACTCTATGTTGGC
AAACAAAAAACCCGTAAGCGTAGAGTTAGTAGGTAGCGTTCAGGCCAGCG
CTTTTGTTGAAGATTGTTGTCCGCGTGGTCAGGAGTGCTACACACGAATA
AGTGCTTGCTCCCCTCTCGCTTACACTGTGCTCCTGCTGCCGCTCTACTA
CTACTACTACTACTACTACTACTACTACTACTACGATTACTACTAAGGGA
AGGTGAACAACCGAATTGGATTTGATAGTTCATGTGAATATAATGGTCGA
GACTCATTCAAAATATGCACACTACATGATACAAGGTAGCAATATGCATA
CGGACGTGATGACCAGTTGACCTGTAGTGAACTTCATGCAGGAGCAAGAA
ATCTACCAACAAACTAAAACATAGCGACATCAATATATCCATCAATCGCC
GAGGATAGCTTCATCAGGAGGATAATGCCTACAATATGAGCTGGTTTGGA
CAAAGTACCGTAGAGTAAAGAGCAAATCAAAAGTACAAAGAGGAATGCAC
AGCTTACTGTACTGTAGTAAATATGACAATAATCGTATCACGAAACGAAG
GTATACTCAGCATATTCAAACTGCTGAATAATTTGGTCATTATCCACAAA
CTGAACAAACTTTACCCAGGAGGGGGGGGGCAGAGGCAACGAAAGAGAGA
GAGAAAATGATCGAGACAGCGATAGGCAGGGAATGACGGGACCATTACAT
TCGACACTGTCTGTTGTCACGACAGGATATGTGTGCGCCGTGCCGTGTCG
CCTCTTACGACCGAGGTGCTCCCAGTCGTGGGGAAGAGAGTTGGAAGAAG
AATCGAACCTCGGAATAGGATGTTTCTAATCGTGGTCCGTGAGAAAGTGT
CGTTGGCGTTTTGTTTCCGTTCTTTTGGACGGGGCGACGGCGTACAGGCG
CGCTGCGGAATTTCCGTAGTGTGCCCAATTTCAAACAAGCCCGCGAACAG
GTCGCCGAACATACCCCCCCCCCCCCTTCGTTGGATCGGTGTGTGGATAA
GCCACCTCCTCATCAACATGGACATAGCTCAGTGTACCTCCCATTTCATT
GATGCTTTTTGTCCCTTTTCTATTCGCTATTCCGTTTTTTATTCGTCATT
TTTCTATTGAATAAGTTCGACCACTCTCAGTTTTCCAAACCAAGTATCTC
CTGTGGTGGGGAAGAATATTGGGCTTCACTCTTCCTTGCAGAGTTGGGGC
GTTCAGATTCAGCAATGGAATCTTTGGGATTCTCATGGTATTTCAGGAAA
TAATGATATATATAGCTGTACGACTGGATTCTATTTAACTGTGTATCTAC
ATTTTCGAGCTCCTCAGAGCTCTACACTCACCGCAGGGACGATGACGTTT
TTTGTAGTTGTGATGGATCTATTGGGATAACAGTGTTAAAAGTAGCCCCG
TGGTACGTACCATCGAAGCATTGATTCTACGTTATTTCTAGAATGTTCAT
GATTCAAATGCAATGCTGATATGATCGGATCGTCCTTCTGGCTATGCTGT
CTGTATTGAGTCAATAATGTATTTTGGCATACGGTGGCGCAATATGTTGC
AACTGCGGACTCATGAGGACTAAGATATGTGCTAGCAAGTACATAGCCAT
AGTAGGGTATCTTGTGTCGCTTCATAGGATACAGCTGTAACTGTTTTTGT
AGTTCCTTGAAATATCCATATTCGCAGGCTTTTCACAAGTCTAGATTGAA
CTCCCCACTTCCTCTCACCACCTCGCGTTGTCAATGGCCCAAAACGGCTA
AGGCCCGTAAAGCATACCGGAGCACCCTCGTTGCCAACATTTGGGTTGAG
AGTCCATTACAGCTCATTCTTCAGTACACCTGATATATTAACCTGAAGCA
TGGTAGAAATGCACGCTGTATACTGTCTGTGATAGAATGGGAAACTTACC
CGCCACCGTCGGTTGCCTCTCCTCCCTCCCCTCTCCTCCTCTTCTTGTGG
GTTTCCTGCTTTTAGGCCGATGGAGTGCTCATGGGTTGCAGCACTTTTGG
TCAGATAGCCGGAACGCTTACGGCTGGCTTGCGTTTCTTTTCGACCGCGT
GCGAGGGGGATCAAACGCCGCGGCACTACAAACTGATGCCTCCCTTAGCA
ATGGCGGAGGGCGGGAAGTCATGGGTTCCTGTGAAAGGATCGTGGCGAGA
CCCTGTGTTGTTGTCTGAAGAAATTTTGAGGGTTGAACTGGAGAATCTTC
TAGGAAATAACGCTAGGAACATTGACAACTTTAACATTCGACCTGACGAC
TAGGGAATGTGCGTGCAGGCGCAACCGTACCCCCACGAGTGGCCAAGGAA
CCTCGGACTATGATATGAAAAGTAAATAAGGGGTTAATAGTGACGTGGGC
TTATAGGCTCAGCATTGTTGATGATCTCGATCCTGTCTGGTTACCCCTTC
GAAGCGGTGATATTGAGCTTTGCGGCGTCTTGTATGCGATAAAGGGTCAA
GTAGACTGCGTATGGATAATCGACGAGGGAATCTTGATTCATCAGTCATG
TTGAATGAGTCATGACACCATGAGCCACTTCTAGCCAAGTATGTAATGTT
CAACACGGGAGCACATGTGTCTAGGCTGTGACCTCTTGTTGGTACGTTCG
TGTGGTACAGATCCCGTGGCGTGGTGAATACACATGGGAGCACCCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig3220:8964..18509+ >mRNA_H-paniculata_contig3220.8673.1 ID=mRNA_H-paniculata_contig3220.8673.1|Name=mRNA_H-paniculata_contig3220.8673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3228bp|location=Sequence derived from alignment at H-paniculata_contig3220:8964..18509+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATCCACGGAGATGAATCCACGGAGGCTCAAAGTGGTACCGCACTTG
ATGAAAGAAAACCTGGCTAGGTCCGGGACTTCGCTGCTGCCGCTATCCGC
CTTATTGCTCTTGCTTCTCGTGGTTTGGTCATCGTCGTCATCGGTGCTGG
CAACAAGCCGAACGAGTGGAATCGTCGACGCCGAACAGGCGTGCTCACTG
TTTATGCAAAGCTCTGCGTCATCATCGAGCTCGTGGCGATTGGAAGACTG
CATTGAAGTTTGGACGGCGTGGTCTACCACATATGCGTTCGACACGACGC
CGCGATTGGAGAACCGTGACGTTTTGAGGGATACCGCGAGCGAGTTAAAG
CGATTGGAGACGCGGTGTGTGGTCCAGCCAGGCGGATCTAATGACGGCGC
CGGGAGCACCGCCATGAGAACCATCTCCGCTTGGATGTTCGCTGCGGCAC
TAGGCTCAAAGTGGTACCGCACTTGATGAAAGAAAACCTGGCTAGGTCCG
GGACTTCGCTGCTGCCGCTATCCGCCTTATTGCTCTTGCTTCTCGTGGTT
TGGTCATCGTCGTCATCGGTGCTGGCAACAAGCCGAACGAGTGGAATCGT
CGACGCCGAACAGGCGTGCTCACTGTTTATGCAAAGCTCTGCGTCATCAT
CGAGCTCGTGGCGATTGGAAGACTGCATTGAAGTTTGGACGGCGTGGTCT
ACCACATATGCGTTCGACACGACGCCGCGATTGGAGAACCGTGACGTTTT
GAGGGATACCGCGAGCGAGTTAAAGCGATTGGAGACGCGGTGTGTGGTCC
AGCCAGGCGGATCTAATGACGGCGCCGGGAGCACCGCCATGAGAACCATC
TCCGCTTGGATGTTCGCTGCGGCACTAGGATGCGATTGGGTCGATCCCGA
GATGAGCAGTACCGTCGCTACGCCGAGCGTCAACGGTACCACATTGTACT
GTCACCCAAAGGTTCAGAAGAGGAAAAAGAGAGGCATGGGGAAAGCGGTC
GACCCGTCGCATGTCTCCTGCTCCGCTGTAAACTGGGTCGACTTTTTCGG
GTTCGGCAAAGAATCCGTGGAGCTGCCGCTCGGGAAGCCGAATAAGACCT
TGACGGATGCGATTGGGTCGATCCCGAGATGAGCAGTACCGTCGCTACGC
CGAGCGTCAACGGTACCACATTGTACTGTCACCCAAAGGTTCAGAAGAGG
AAAAAGAGAGGCATGGGGAAAGCGGTCGACCCGTCGCATGTCTCCTGCTC
CGCTGTAAACTGGGTCGACTTTTTCGGGTTCGGCAAAGAATCCGTGGAGC
TGCCGCTCGGGAAGCCGAATAAGACCTTGACGGTTACAACCGCAAAGATC
GCAGTCCGAAGAGCTCGGAAGGAGCTGCTATCAATCCCCACGAATCACCC
CGCGTGGGACTATTTGCTGCTGGACGTGGGCAGGGGTGTAGGTCCTAGCT
ATTTGATGTCTTCGGGTTCTTGGGATGGGTTTATGCAGGAGGCTGCTCGC
AATGTCCTGGCGGTGTTCAGGAGAAATTTTCACGAGTTTCCACGTCCAGG
GTTACAACCGCAAAGATCGCAGTCCGAAGAGCTCGGAAGGAGCTGCTATC
AATCCCCACGAATCACCCCGCGTGGGACTATTTGCTGCTGGACGTGGGCA
GGGGTGTAGGTCCTAGCTATTTGATGTCTTCGGGTTCTTGGGATGGGTTT
ATGCAGGAGGCTGCTCGCAATGTCCTGGCGGTGTTCAGGAGAAATTTTCA
CGAGTTTCCACGTCCAGGGTATGACAAGATCCCAACGTGTGCGTTCGATC
CCGAGGTCCTCAATATCGCGATGCACATTCGGTTGGGCGATAGGGAGCAG
TACATAGGGGACAGTTTCTCGGGGTACTTCAGGTTTCTGGAGGCGTTTAT
GGACAGCGTAGCGGATATTGTGCAGGACATGGGACAACCACGCCCAATGT
TTCACGTGTTTTCGGAGACTGCAAAGCCGTGCCCGAATGCGAAGACGGGG
CTCTTCGAGGAGTTCCCCAAGTGGCCTGTGGTTATGAATCAGGTATGACA
AGATCCCAACGTGTGCGTTCGATCCCGAGGTCCTCAATATCGCGATGCAC
ATTCGGTTGGGCGATAGGGAGCAGTACATAGGGGACAGTTTCTCGGGGTA
CTTCAGGTTTCTGGAGGCGTTTATGGACAGCGTAGCGGATATTGTGCAGG
ACATGGGACAACCACGCCCAATGTTTCACGTGTTTTCGGAGACTGCAAAG
CCGTGCCCGAATGCGAAGACGGGGCTCTTCGAGGAGTTCCCCAAGTGGCC
TGTGGTTATGAATCAGGTACCTCAATGCCTCACTGTTGAACCGCCGCTGG
ATTGTATAGAGAAGGTAGCTGGATTGGTAGAGTCCTGTCCACCTTACCGG
TCCGGGATCTTCCGTGTTCGCGGAAAAAATATGACTCTTCACGTCGGCAG
TGATGTCGCCAATGATTTGGCATGTATGATCCAGGTACCTCAATGCCTCA
CTGTTGAACCGCCGCTGGATTGTATAGAGAAGGTAGCTGGATTGGTAGAG
TCCTGTCCACCTTACCGGTCCGGGATCTTCCGTGTTCGCGGAAAAAATAT
GACTCTTCACGTCGGCAGTGATGTCGCCAATGATTTGGCATGTATGATCC
AGGCCGATGGAGTGCTCATGGGTTGCAGCACTTTTGGTCAGATAGCCGGA
ACGCTTACGGCTGGCTTGCGTTTCTTTTCGACCGCGTGCGAGGGGGATCA
AACGCCGCGGCACTACAAACTGATGCCTCCCTTAGCAATGGCGGAGGGCG
GGAAGTCATGGGTTCCTGTGAAAGGATCGTGGCGAGACCCTGTGTTGTTG
TCTGAAGAAATTTTGAGGGTTGAACTGGAGAATCTTCTAGGAAATAACGC
TAGGAACATTGACAACTTTAACATTCGACCTGACGACTAGGCCGATGGAG
TGCTCATGGGTTGCAGCACTTTTGGTCAGATAGCCGGAACGCTTACGGCT
GGCTTGCGTTTCTTTTCGACCGCGTGCGAGGGGGATCAAACGCCGCGGCA
CTACAAACTGATGCCTCCCTTAGCAATGGCGGAGGGCGGGAAGTCATGGG
TTCCTGTGAAAGGATCGTGGCGAGACCCTGTGTTGTTGTCTGAAGAAATT
TTGAGGGTTGAACTGGAGAATCTTCTAGGAAATAACGCTAGGAACATTGA
CAACTTTAACATTCGACCTGACGACTAG back to top
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