prot_H-paniculata_contig3220.8673.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3220.8673.1
Unique Nameprot_H-paniculata_contig3220.8673.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length538
Homology
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: A0A6H5JW68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW68_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 1.030e-95
Identity = 150/287 (52.26%), Postives = 188/287 (65.51%), Query Frame = 0
Query:  236 ELLSIPTNHPAWDYLLLDVGRGVGPSYLMSSGSWDGFMQEAARNVLAVFRRNFHEFPRPGYDKIPTCAFDPEVLNIAMHIRLGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMGQPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQCLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTAGLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLLG 522
            E L    ++PAW+  LL +     P Y  + GSW+   +EA R VL  F+++FH FPRP  +  P CAF    L+IA+H+RLGDR+  + D    YF +LE FM++VA      GQ  P+FH+FSET   CP+A+ G FEEFPKWPV M+QV  C+    P +C EK AG   SC P RSGIF V G+ M LHVG DV NDL+CM  A+GVLMGCSTFGQ+AG L+ G+RFFST C G +T   YKL+PP+A+A  G  WVPV GSW DPV+ SE IL   L+ LLG
Sbjct:    4 EQLHDEQSNPAWNQWLLMMNLMTAPRYFSAVGSWNARKREAVRTVLHTFKQSFHTFPRPWNNIQPECAFSQSKLDIAIHVRLGDRKDSLNDD--SYFDYLEDFMETVASAAIARGQDHPVFHIFSETHSRCPSAENGAFEEFPKWPVEMDQVSTCMEATTPEECPEKDAG-APSCNPTRSGIFAVDGREMNLHVGLDVQNDLSCMANANGVLMGCSTFGQVAGVLSKGIRFFSTECAGWRTTIQYKLIPPMAIAGRGHMWVPVSGSWHDPVIASESILGASLDLLLG 287          
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 1.640e-81
Identity = 159/396 (40.15%), Postives = 220/396 (55.56%), Query Frame = 0
Query:  134 MRTISAWMFAAALGCDWVDPEMSSTVATPSVNGTTLYCHPKVQ-KRKKRGMGKAV-DPSHVS---CSAVNWVDFFGFGKESVELPLGKPNKTLTVTTAKIA-VRRARKELLSIPTNHPAWDYLLLDVGRGVGPS-YLMSSGSWDGFMQEAARNVLAVFRRNFHEFPRPGYDKIPTCAFDPEVLNIAMHIRLGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMGQPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQCLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTA-GLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLL 521
            MR ++A +FA  +GCDW+ P           +G ++YCH       ++RG G A  D + +    CS VNW ++F     SVELP     + +   T++   +  A KE  +   ++  WD L + + +    S +L S GSWDG+ +E  R VL  FR NFH+ PRP Y+  P C ++   LN A+H+R+GDR +  G +   YF  LE FM +V   V +  Q  PMFHVFSE   PCP  +   F EFP WPV  +QV  C     P +  E      +  P  R   FRV G+ + LH+G + A  L+CM+ ADG+LMGCSTFGQ+AG L   G+ FFST C G   P   K++PPLA+AE G+ WVP+ GSWRDPVL ++ +    L+ LL
Sbjct:    3 MRHLAAKIFAEEVGCDWLTPSQWGMPVAGDGSGASVYCHSAATYDEQRRGFGNATKDEAEIMVHRCSVVNWPEYFNLNASSVELPANCTFRVVEADTSRNHDLEMALKETDANGFDNLGWDRLKIVLRQPHASSNFLASLGSWDGWKREVVRKVLRQFRENFHQSPRPWYNDEPECGYEESELNFALHVRMGDRRELEGVT-PEYFSLLEGFMATVTQAVVEREQAAPMFHVFSEALYPCPFPENATFTEFPFWPVERDQVSVC-----PRNAAE------QDGPASRPDTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDGISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHVFSAVLDELL 386          
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: D7G5J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J8_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 5.840e-73
Identity = 114/210 (54.29%), Postives = 146/210 (69.52%), Query Frame = 0
Query:  317 LGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMGQPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQCLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTAGLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLLGNNAR 526
            +GDR  +   S   YF  +E  M++VAD  ++ G P P+FHVFSET  PCP+  TGLF+EFP WPV ++++ +CL    P+DC EK AG    C P R+GIFR+R K++ LHVGSDV N+++CMIQADGVLMGCSTFGQIAG LT G+  FST C G+ TP  Y+ +PPLA+AE G  WVP++GSW DPVL S  I    L+ LL   +R
Sbjct:    1 MGDRRAFYDGSLQ-YFHNVELIMETVADEFRERGLPEPLFHVFSETLSPCPSTVTGLFDEFPIWPVELDKIEECLAAATPIDCPEKQAGTF--CTPKRAGIFRIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISLFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLTSRSIFSAALDTLLVAKSR 207          
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: A0A6H5L814_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L814_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 8.240e-56
Identity = 105/239 (43.93%), Postives = 138/239 (57.74%), Query Frame = 0
Query:  296 YDKIPTCAFDPEVLNIAMHIRLGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMGQPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQ--------CLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTAG-LRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLLGNNA 525
            Y+  P C ++   LN A+H+R+GDR +  G +   YF  LE FM +V   V +  Q  PMFHVFSE   PCP+ +   F EFP WPV  +QV           L+ E    C+   A   +  P  R G FRV G+ + LH+G + A  L+CM+ ADG+LMGCSTFGQ+AG L    + FFST C G   P   K++PPLA+AE G+ WVP+ GSWRDPVL ++ I    L+ LL   A
Sbjct:   14 YNDEPGCGYEESQLNFALHVRMGDRRELEGVT-PEYFSLLEDFMATVTQAVVEREQAAPMFHVFSEALYPCPSPENATFTEFPLWPVERDQVDLNVSLHRLFSLSNEKVSVCLRNAAE--QGAPASRKGTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDRISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHIFSAALDALLKRKA 249          
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: A0A6H5JJ94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ94_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.000e-21
Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 0
Query:  385 NQVPQCLTVEPPLDCIEKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGCSTFGQIAGTLTAGLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKGSWRDPVLLSEEILRVELENLLGNNAR 526
            +Q+ +CL    P DC EK AG    C P R+GIFR+R K++ LH+GSDV N+++C+I+ADGVLM                                + +PPL +AE G  WVP++GSW DPV  S  I    L+ LL   +R
Sbjct:   20 DQIEECLAATTPQDCPEKQAGTF--CTPKRAGIFRIRYKSIVLHMGSDVQNEMSCIIEADGVLM--------------------------------RSIPPLTIAEKGHLWVPIEGSWHDPVWSSRSIFSAALDTLLVAKSR 127          
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Match: D7G5J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J9_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.200e-17
Identity = 52/169 (30.77%), Postives = 80/169 (47.34%), Query Frame = 0
Query:   54 VDAEQACSLFMQSSASSSSSWRLEDCIEVWTAWSTTYAFDTTPRLENRDVLRDTASELKRLETRCVVQPGGSNDGAGSTAMRTISAWMFAAALGCDWVDPEMSSTVATPSVNGTTLYCHPKVQKRKKRGMGKAVDPSHVS--------CSAVNWVDFFGFGKESVELPL 214
            V+   AC+ F     + S  W  EDC+ VW  ++ T      PR+ + D+  DTA EL+R  + C+V    + DGAGST +R ++ W+F+  +GCDWV P+              +YCH       + G    +DPS           C  ++W+ +F F   SV  P+
Sbjct:   98 VEPADACADFAPGQYTGSG-WTPEDCLHVWNDFNDTVWEQFHPRMPDADLWIDTAEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGKKFVGGRSGTAVMYCH-------RAGTAAEMDPSKTKEELKAMRRCVIIDWLSYFQFDIPSVPSPV 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3220.8673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JW68_9PHAE1.030e-9552.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT1_ECTSI1.640e-8140.15Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
D7G5J8_ECTSI5.840e-7354.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L814_9PHAE8.240e-5643.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ94_9PHAE2.000e-2138.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5J9_ECTSI5.200e-1730.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 23..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..537
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3220contigH-paniculata_contig3220:8986..18116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3220.8673.1mRNA_H-paniculata_contig3220.8673.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3220 8964..18509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3220.8673.1 ID=prot_H-paniculata_contig3220.8673.1|Name=mRNA_H-paniculata_contig3220.8673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=538bp
MNPRRLKVVPHLMKENLARSGTSLLPLSALLLLLLVVWSSSSSVLATSRT
SGIVDAEQACSLFMQSSASSSSSWRLEDCIEVWTAWSTTYAFDTTPRLEN
RDVLRDTASELKRLETRCVVQPGGSNDGAGSTAMRTISAWMFAAALGCDW
VDPEMSSTVATPSVNGTTLYCHPKVQKRKKRGMGKAVDPSHVSCSAVNWV
DFFGFGKESVELPLGKPNKTLTVTTAKIAVRRARKELLSIPTNHPAWDYL
LLDVGRGVGPSYLMSSGSWDGFMQEAARNVLAVFRRNFHEFPRPGYDKIP
TCAFDPEVLNIAMHIRLGDREQYIGDSFSGYFRFLEAFMDSVADIVQDMG
QPRPMFHVFSETAKPCPNAKTGLFEEFPKWPVVMNQVPQCLTVEPPLDCI
EKVAGLVESCPPYRSGIFRVRGKNMTLHVGSDVANDLACMIQADGVLMGC
STFGQIAGTLTAGLRFFSTACEGDQTPRHYKLMPPLAMAEGGKSWVPVKG
SWRDPVLLSEEILRVELENLLGNNARNIDNFNIRPDD*
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