mRNA_H-paniculata_contig32164.8659.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: D7G1I7_ECTSI (Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI) HSP 1 Score: 103 bits (257), Expect = 1.860e-24 Identity = 42/54 (77.78%), Postives = 48/54 (88.89%), Query Frame = 1
Query: 13 SYRQIRRWGMAACVRNCCFEEADHPWLLHEVRVLPHLLMRLSDDADEYDFDEKV 174
S +RRWG+A CVRNCCFEE DHPWLLHEV+V+PHLLMRL+DD DEYDF+EKV
Sbjct: 304 SANPVRRWGVAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKV 357
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: H2XL93_CIOIN (Protein HGH1 homolog n=2 Tax=Ciona intestinalis TaxID=7719 RepID=H2XL93_CIOIN) HSP 1 Score: 55.1 bits (131), Expect = 2.400e-7 Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 28 RRWGMAACVRNCCFEEADHPWLLHE-VRVLPHLLMRLSDDADEYDFDE 168
RR G+AA +RNCCFE H WLL E V +LPHLL+ L+ A+E+D D+
Sbjct: 205 RRGGIAATIRNCCFEYESHDWLLSEDVDLLPHLLLPLA-GAEEFDDDD 251
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: A0A7S2RP18_9STRA (Protein HGH1 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP18_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 7.690e-7 Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 13 SYRQIRRWGMAACVRNCCFEEADHPWLLHEVRVLPHLLMRLS 138
S RR G+AA +RNCC+E +DH WLLH+++ L ++L L+
Sbjct: 26 SSNMTRRRGVAAALRNCCYETSDHDWLLHDLKTLNYILFALA 67
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: A0A6P8HXK7_ACTTE (Protein HGH1 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HXK7_ACTTE) HSP 1 Score: 51.6 bits (122), Expect = 4.040e-6 Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 25 IRRWGMAACVRNCCFEEADHPWLLH-EVRVLPHLLMRLS--DDADEYDFDE 168
+RR GMAA ++NCCF+ H WLL EV +L HLL+ L+ ++ DE D D+
Sbjct: 197 VRRGGMAAVLKNCCFDTEYHEWLLSDEVDILXHLLLPLAGGEELDEADMDK 247
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: UPI000C253778 (protein HGH1 homolog n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C253778) HSP 1 Score: 50.8 bits (120), Expect = 7.610e-6 Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 25 IRRWGMAACVRNCCFEEADHPWLLHE-VRVLPHLLMRL--SDDADEYDFDE 168
IRR G+ A ++NCCFEE H WLL E V +LP LL+ L S++ DE D D+
Sbjct: 210 IRRGGIIATLKNCCFEEEFHEWLLGEKVDILPSLLLPLAGSEEFDEEDNDK 260
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: K1QN54_CRAGI (Protein HGH1 homolog n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QN54_CRAGI) HSP 1 Score: 50.4 bits (119), Expect = 1.050e-5 Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 25 IRRWGMAACVRNCCFEEADHPWLLHE-VRVLPHLLMRLSDDADEYDFDE 168
IRR G+ +C++NCCF+E H WLL + V +L +LL+ L+ +E+D D+
Sbjct: 259 IRRLGVVSCIKNCCFDEEHHDWLLSDKVDILSYLLLPLA-GPEEFDDDD 306
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: UPI0006258FA9 (protein HGH1 homolog isoform X1 n=2 Tax=Orussus abietinus TaxID=222816 RepID=UPI0006258FA9) HSP 1 Score: 50.1 bits (118), Expect = 1.420e-5 Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 25 IRRWGMAACVRNCCFEEADHPWLL-HEVRVLPHLLMRLS 138
+RR+G+ A +RNCCF+ +H WLL EV +LPH+L+ L+
Sbjct: 208 VRRYGIVATLRNCCFDIDNHDWLLGSEVDILPHILLPLA 246
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: UPI00145533FC (protein HGH1 homolog n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145533FC) HSP 1 Score: 49.7 bits (117), Expect = 1.950e-5 Identity = 22/39 (56.41%), Postives = 28/39 (71.79%), Query Frame = 1
Query: 25 IRRWGMAACVRNCCFEEADHPWLLHE-VRVLPHLLMRLS 138
+RR G+ A +RNCCFE H WLL E V +LPHLL+ L+
Sbjct: 205 VRRRGIVAALRNCCFETDYHDWLLSEAVDILPHLLLPLA 243
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: UPI0008F9A92E (protein HGH1 homolog n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9A92E) HSP 1 Score: 49.7 bits (117), Expect = 1.950e-5 Identity = 22/49 (44.90%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 22 QIRRWGMAACVRNCCFEEADHPWLLH-EVRVLPHLLMRLS-----DDAD 150
+IR+ G+ ++NCCF++ H WLL EV +LPHLL+ L+ DD D
Sbjct: 214 EIRKSGVVTLIKNCCFDQEHHEWLLSPEVEILPHLLLPLAGPEQFDDED 262
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Match: A0A1R1PRE4_ZANCU (Protein HGH1-like protein n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PRE4_ZANCU) HSP 1 Score: 48.9 bits (115), Expect = 3.360e-5 Identity = 22/49 (44.90%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 25 IRRWGMAACVRNCCFEEADHPWLLHEVRVLPHLLMRL--SDDADEYDFD 165
IRR G+A+ ++N CF+ H LLHE+ +LP++L+ L +D+ DE D D
Sbjct: 100 IRRGGVASSIKNVCFDLEAHERLLHELNILPYILLPLCGNDEYDENDMD 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32164.8659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32164.8659.1 >prot_H-paniculata_contig32164.8659.1 ID=prot_H-paniculata_contig32164.8659.1|Name=mRNA_H-paniculata_contig32164.8659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp PPPPSYRQIRRWGMAACVRNCCFEEADHPWLLHEVRVLPHLLMRLSDDADback to top mRNA from alignment at H-paniculata_contig32164:2396..2569- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32164.8659.1 ID=mRNA_H-paniculata_contig32164.8659.1|Name=mRNA_H-paniculata_contig32164.8659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=174bp|location=Sequence derived from alignment at H-paniculata_contig32164:2396..2569- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32164:2396..2569- >mRNA_H-paniculata_contig32164.8659.1 ID=mRNA_H-paniculata_contig32164.8659.1|Name=mRNA_H-paniculata_contig32164.8659.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=348bp|location=Sequence derived from alignment at H-paniculata_contig32164:2396..2569- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |