mRNA_H-paniculata_contig321.8639.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: A0A6H5KGL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL5_9PHAE) HSP 1 Score: 253 bits (646), Expect = 3.390e-71 Identity = 154/342 (45.03%), Postives = 190/342 (55.56%), Query Frame = 2
Query: 143 GTVGAVAPGELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSGVAVSGLDIGDEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQSWFQTVARIPPLDDRVWDARLI-----------------QCGDIYPAIKG-----------------EKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMSRSRAGDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFAD--------------QRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWNV 1024
GTVG V PG LLGP++GL FS+GGD+LF+ GSS+R Y V SG L + RVF GV V G+D+G E GA+FGDK + IV+GV P+ A D SWF+ VA +P L DRVWDARLI + G I G + G+ +GE + +VA ALAHN VEVW W P+R+ +++ GDPCLLYHARLWGR LGELRVAAGT FNQ+LVW P+ + Q GK D + GG D LLRL+ HEGV+FR++WREDG R+ SASDDRTVRVW+V
Sbjct: 13 GTVGDVLPGPLLGPVMGLAFSTGGDLLFSCSGSSLRVYDVRSGAPLSATRVFSPGVTVHGIDVGRESF-GAIFGDKCVRIVDGV--PTR------------AGDTATCSWFRGVASLPELGDRVWDARLIGKSGKGTGEGGAKEAKGRTGGIGRGAVGGVRRIGAVPRQGARKEVDGGRRRGERAGVGMVAVALAHNSVEVWDWAGQARPLRIHQAQGGDPCLLYHARLWGRALGELRVAAGTAFNQVLVWCPSQAKNFGPEGVHRKGGEGHGTVGQGDGKPGDPEGVPPCLPGGGVD-------LLRLKGHEGVIFRVAWREDGTRLVSASDDRTVRVWDV 332
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: D8LMQ4_ECTSI (Nucleotide binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ4_ECTSI) HSP 1 Score: 242 bits (618), Expect = 1.750e-67 Identity = 152/339 (44.84%), Postives = 193/339 (56.93%), Query Frame = 2
Query: 143 GTVGAVAPGELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSGVAVSGLDIGDEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQSWFQTVARIPPLDDRVWDARLI--------------QCGDIYPAI-----------------KGEKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMSRSRAGDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFAD--QRQGKRTDLDVRGQWQRN-GGADQIRS-----GRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWNVVDEHDG 1042
GTVG V PG LLGP++GL FS+GGD+LF+ GSS+R Y V SG L + RVF GV V G+D+G E GA+FGDK + IV+GV TG A D SWF+ VA +P L+DRVWDARLI + G I + + G+ +GE + +VA ALAH VEVW W P+R+ R++ GDPCLLYHARLWGR LGELRVAAGT FNQ+LVWSP + +R+G V GQ N G +++ G ++LRL+ HEGV+F EDG R+ SAS+DRTVRVW+V +G
Sbjct: 13 GTVGDVLPGPLLGPVMGLAFSTGGDLLFSCSGSSLRVYDVRSGAPLSATRVFSPGVTVHGIDVGRESF-GAIFGDKCVRIVDGV------------PTG--AGDTAACSWFRGVASLPDLEDRVWDARLIGKSGRGTGEGGGKGRTGGIXXXXXXXXXXXXXAPRQGVGKESDGGRRRGERAGVGMVAVALAHTSVEVWNWAGQARPLRIHRAQGGDPCLLYHARLWGRALGELRVAAGTAFNQVLVWSPGQPTNFVPEGVRRKGGEGHGTV-GQGDGNPGDPEEVPPCLPGRGVDVLRLKGHEGVIFS----EDGMRLGSASEDRTVRVWDVESPCEG 331
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: A0A5D6Y0N1_9STRA (MIF4G domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0N1_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.850e-24 Identity = 90/293 (30.72%), Postives = 130/293 (44.37%), Query Frame = 2
Query: 155 AVAPGELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSGVAVSGLDI----GDEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQSWFQTVARIPPLDDRVWDARLIQCGDIYPAIKGEKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMSRSRAGDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFADQRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWN 1021
A P E +G + + FS+ G +LF G +V Y+ SG L+ VFP G+ + G D D G+ A FG K + ++ G LP T A D + R D V+D R++ P + +A LAHN V++W+ E + + + C+LY GR++ EL VAAGTVF QIL+W P FA G+ D + GA RL +H GVLF++ W +D +AS SDDRTV++W+
Sbjct: 457 AAEPLEYIGAVTLVRFSADGSLLFVGVGPAVSVYAAASGALVAQFGVFPRGI-LHGSDFVASSDDNGVVAAFFGQKRVALLRG--LPQ---------TLAQALDDDAVAAATAAQRTRSFGDWVFDVRVL-ISQTQPRL---------------ALAVGLAHNYVQIWE---PERDCVLRSVQCAERCILYALAFHGRSVDELVVAAGTVFQQILLWKP------FASSDDGRNDD---------DAGAVAP-----AQRLHSHNGVLFKLEWSDDASMLASVSDDRTVQLWS 698
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: H3GJ35_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJ35_PHYRM) HSP 1 Score: 107 bits (266), Expect = 4.370e-22 Identity = 85/291 (29.21%), Postives = 124/291 (42.61%), Query Frame = 2
Query: 170 ELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSG-------VAVSGLDIGDEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQSWFQTVARIPPLDDRVWDARLIQCGDIYPAIKGEKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMSRSRAGDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFADQRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWN 1021
+ LG + + FSS G +L+ G ++ YS +G+LL V G V + G GA FG K + + N T + + F + + D V+D +L+ E GK ES K+ LVA LAHN V++W + C+LY GR+L EL VA+GTVF QIL+W+P D NG + + RL AH+GVLF+++W D + +AS SDDRTV++W+
Sbjct: 7 DFLGAVTLVAFSSNGSLLYVGVGPTIFLYSTATGELLGEHEVLTRGILHGCDVVEILGSSTAKVEFAGAFFGQKRVSCFH--------NLPQTPEAAQGIEE------FAVLGKPKVFCDWVFDVQLLA---------DEFASGK-ESMKI-LVAVGLAHNLVQIWD-------------PCAERCILYALAFHGRSLDELVVASGTVFQQILLWNPMD------------------------NGSEEPNSAVEPAQRLHAHDGVLFKLAWSSDARSLASVSDDRTVQLWS 235
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: W4GGQ4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGQ4_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.710e-21 Identity = 82/304 (26.97%), Postives = 137/304 (45.07%), Query Frame = 2
Query: 167 GELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSGVAVSGLDIGDEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQSWFQTVARIPPLDDRVWDARLIQCGDIYPAIKGEKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMSRSRAGDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFADQRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVW----NVVDEHDGSLSLPSNV 1066
GE +G + L FS+ G +L+A+ G ++ Y +G + VS S + G+D+ FG K + +V+ + + N + + IA + C W + DARL+ + + + +VA LAHN V +W + + + + +LY L+GR+L L VAAGTVF IL+W+P TL+ + +Q + V RL H+GVLF+++W G+++AS SDDR+V++W N V D +L+ +N+
Sbjct: 9 GEFVGAVTALHFSADGSLLYAAVGCTLYVYDTTNGTMFVSPLPIWSHGTIHGMDVAQS--LALCFGQKQLALVSALPTTTTSNVQSSSPSSIIATE--CMDW-------------ILDARLLVDDVVVDDT----------ALLLPMVAVGLAHNMVHIWDPST---RTTLQTFQCTERTILYAMGLYGRSLESLIVAAGTVFQHILLWAPP-TLSSSSSSQQPSNSVAQV------------------TQRLHQHDGVLFQLTWSSTGRQLASVSDDRSVQLWSNLTNDVGRDDVALARDANL 263
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: A0A2D4BZ66_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ66_PYTIN) HSP 1 Score: 107 bits (266), Expect = 3.130e-21 Identity = 84/308 (27.27%), Postives = 129/308 (41.88%), Query Frame = 2
Query: 161 APGELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSG-------VAVSGLDIGDEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGAT-GKIARDGPCQSWFQTVARIPPLDDRVWDARLIQCGDIYPAIKGEKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMSRSRA---GDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFADQRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWNVVDEHDGSLS 1051
A GE +G + L FS G +LF G+++ Y SG+LL + VFP G V + + + FG K ++ V V P T ++ CQ W V+D R++ + S +VA LAHN +++W PV+ R+ + C+LY +GR +L VAAGTVF Q+L+W+P D AD+ ++ RL H+GV+F++ W D +++AS SDDRTV++W+ D S
Sbjct: 15 AKGEYIGAVTLLHFSHDGSLLFVGVGAALYVYDTRSGELLATYAVFPRGILHGRDYVRIPATNDREASSLAVFFGQKRLVCVRDV--PETREHVLTQRELQRVGVSKTCQDW-------------VFDVRILA------------EETTASSSAFPVVAIGLAHNYIQLWD------PVQNHVLRSVYCTERCILYSLSFFGRRSADLMVAAGTVFQQVLLWAPRDETHDQADRADPQQ-------------------------RLHGHDGVIFKLEWSSDARKLASVSDDRTVQLWSHAPSEDSESS 264
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: A0A3R7YE74_9STRA (Uncharacterized protein n=3 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7YE74_9STRA) HSP 1 Score: 105 bits (262), Expect = 9.380e-21 Identity = 84/291 (28.87%), Postives = 127/291 (43.64%), Query Frame = 2
Query: 170 ELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSGVAVSGLDI----GDEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQSWFQTVARIPPLDDRVWDARLIQCGDIYPAIKGEKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMSRSRA---GDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFADQRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWN 1021
+ LG + L+FSS G +L+ G ++ Y+ +GKL+ V G+ + G D G FG K + + LP + D T+ + D V+DA L+ D + + E K LVA LAHN V++W PV R+ + C+LY GR+L EL VA+GTVF QIL+W+P + N D + + RL AH+GV+F+++W D + +AS SDDRTV++W+
Sbjct: 9 DFLGAVTLLSFSSDGSLLYVGVGPTIFLYATATGKLMSQHTVLTRGI-LHGCDFVRFPDTNAFAGVFFGQKRVSCFHN--LP------------QTPEDARTLEKLMTLGKPNVFCDWVFDAHLLT--DDFAS----------EQNKKLLVAVGLAHNFVQIWD------PVTRDILRSVQCAERCILYALAFHGRSLDELVVASGTVFQQILLWNPME------------------------NALKDVNTAIEPVQRLHAHDGVIFKLAWSSDARSLASVSDDRTVQLWS 242
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: A0A833THE9_PHYIN (WD domain G-beta repeat n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833THE9_PHYIN) HSP 1 Score: 104 bits (259), Expect = 2.440e-20 Identity = 91/316 (28.80%), Postives = 138/316 (43.67%), Query Frame = 2
Query: 170 ELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSGVAVSGLDIG-----DEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQ-SWFQTVARIPPLDDRVWDARLIQCGDIYPAIKGEKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMSRSRA---GDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFADQRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWNVVDEHDG-----SLSLPSNVTHS 1075
E L + ++FS G +L+ G +V Y+ G+G+LL V GV + G DI D+ GA FG K + LP + C+ +A+ D V+D +L+ + K E L A LAHN V++W P+R R+ + C+LY GR+L EL VA+GTVF QIL+W+P + + + T ++ RL AH+GVLF+++W D + +AS SDDRTV++W+ H+G L LP +T +
Sbjct: 10 EFLSAVTLVSFSYDGSLLYVGVGPTVFLYATGTGQLLGKHEVLTRGV-LHGCDIVRLSALDKSFVGAFFGQKRVSCFQN--LPQTC-------------EAACELEELAVLAKPKVFCDWVFDVQLLTTD--FALTKNEN----------LLAAVGLAHNLVQIWD------PLRNDILRSVQCAERCILYALAFHGRSLDELVVASGTVFQQILLWNPME------NGKNALNTAVEP------------------AQRLHAHDGVLFKLTWSSDARSLASVSDDRTVQLWS----HNGIITAEQLHLPRTLTRA 263
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: A0A484DQN5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQN5_BRELC) HSP 1 Score: 103 bits (258), Expect = 3.280e-20 Identity = 90/311 (28.94%), Postives = 134/311 (43.09%), Query Frame = 2
Query: 110 NSI*VATMNDTGTVGAVAPGELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSGVAVSGLDI----GDEGLTGAVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQSWFQTVARIPPLDDRVWDARLIQCGDIYPAIKGEKGKGKGESRKMRLVAAALAHNCVEVWQWNNVEGPVRMS---RSRAGDPCLLYHARLWGRTLGELRVAAGTVFNQILVWSPADTLALFADQRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWN 1021
N+I + + N + A + LGP+ +TFSS G +L+ G ++ Y+ + + L VF G+ + G DI E GA FG K + F AR + D V+D +L+ AI+ E LVA LAHN V++W PVR S ++ + C+LY GR+L EL VA+GTVF QIL+W+P + A K + ++ RL AH GVLF++ W D + +AS SDDR+V++W+
Sbjct: 3 NTIEITSQNGPSS-SAFTKQDYLGPVTLVTFSSCGSLLYVGVGPTIFLYATTTSEFLGKHDVFTRGI-LHGCDIVLHAASESFVGAFFGQKRVSC-----------FQQLPQNPDAARS---HEQLAVLGTSKVFCDWVFDVQLLTSE--ITAIEDEN----------LLVAVGLAHNLVQIWD------PVRNSILRTAQCAERCILYSLAFHGRSLDELIVASGTVFQQILLWNPMEITNDVA-----KAAIMPIQ-------------------RLHAHNGVLFKLVWSSDARSLASVSDDRSVQLWS 255
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Match: A0A8B9A034_PHODC (uncharacterized protein LOC103721829 isoform X1 n=3 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9A034_PHODC) HSP 1 Score: 103 bits (258), Expect = 3.510e-20 Identity = 95/319 (29.78%), Postives = 141/319 (44.20%), Query Frame = 2
Query: 167 GELLGPIVGLTFS------SGGDILFASCGSSVRAYSVGSGKLLVSRRVFPSGVAVSGLDIG-----DEGLTG-------AVFGDKSILIVNGVVLPSLFNFSWTGATGKIARDGPCQSWFQTVARIPPLDDRVWDARLIQCGD--------IYPAIKGEKGKGKGESRKMRLVAAALAHNCVEVWQ--WNNVEGPVRMSRSRAGDPCLLYHARLWGRTLGELRVAAGTVFNQILVWS--PADTLALFADQRQGKRTDLDVRGQWQRNGGADQIRSGRNLLRLQAHEGVLFRISWREDGKRIASASDDRTVRVWNVVDE 1033
G LG I L+F S +L A GS + Y V SG LL S VF GV V G+ + +E + AV+G++ + LF A+ RDG + V R+P D V DA ++ I + + E ++ L+ N V +W +NV +SR ++ + CLLY R+WG ++ LRVA+GT+FN+I++W P L L ++ + W DQ +L RL HEG +FRI+W DG ++ S SDDR+ RVW + D+
Sbjct: 14 GPYLGEISALSFLPLPSCLSSFPLLLAGTGSQLLVYDVESGNLLNSFDVF-QGVRVHGISLRFPNPKEESSSPDTACFLIAVYGERRV---------KLFLLRVDAASSGRVRDGAGVG-LKLVFRLPAFDHWVLDACFLKVNFGISHNWIFIGWCLLFDSDSWWQEDS---ILVLGLSDNSVALWDLSMSNV-----VSRVKSSERCLLYSMRMWGDSMKTLRVASGTIFNEIIIWKLIPRAPLPLSKSAKESYNPSVSGTKSWPH----DQQYMALHLSRLTGHEGSIFRITWSADGSKLVSVSDDRSARVWILSDQ 309 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig321.8639.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig321.8639.1 >prot_H-paniculata_contig321.8639.1 ID=prot_H-paniculata_contig321.8639.1|Name=mRNA_H-paniculata_contig321.8639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=362bp MNDTGTVGAVAPGELLGPIVGLTFSSGGDILFASCGSSVRAYSVGSGKLLback to top mRNA from alignment at H-paniculata_contig321:2287..7368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig321.8639.1 ID=mRNA_H-paniculata_contig321.8639.1|Name=mRNA_H-paniculata_contig321.8639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5082bp|location=Sequence derived from alignment at H-paniculata_contig321:2287..7368+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig321:2287..7368+ >mRNA_H-paniculata_contig321.8639.1 ID=mRNA_H-paniculata_contig321.8639.1|Name=mRNA_H-paniculata_contig321.8639.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2172bp|location=Sequence derived from alignment at H-paniculata_contig321:2287..7368+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |