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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 672 |
| Cds size | 669 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3209.8638.1 >prot_H-paniculata_contig3209.8638.1 ID=prot_H-paniculata_contig3209.8638.1|Name=mRNA_H-paniculata_contig3209.8638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp
MIRHKSRPPPSYHWEGFGRKNTKPPWFDVRTFDKERRDVGWVVKDFAPPG
TKKVRNRKGAAPFVHDDNEHIYRPTVPSKGLAVEAPATPSSRALLSRNKS
CSATGFDEIGTEAKLAAMKEASRHSRLQMLANVEISQRSELGETICGRGE
SIKKPLLYPQTVTHQQALNLEKKAGPRAPVDDIALQRKPPTTDGSIARAF
EPWNQHMYLPYSRTRSDFPNLA* back to topmRNA from alignment at H-paniculata_contig3209:11688..14757+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3209.8638.1 ID=mRNA_H-paniculata_contig3209.8638.1|Name=mRNA_H-paniculata_contig3209.8638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3070bp|location=Sequence derived from alignment at H-paniculata_contig3209:11688..14757+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGATGATTCGTCACAAGAGCAGGCCGCCACCTTCTTATCACTGGGAAGG
GTTTGGGAGGAAAAATACCAAACCTCCATGGTTTGATGTACGCACTTTCG
ACAAAGAAAGACGGGATGTGGGTTGGGTTGTAAAGGACTTTGCTCCGCCC
GGAACAAAGAAGGTGCGGAAGTTCGCCAAAGCCCGTCGCTGCTCAGTTCT
CTCCAGATAATTTTCTGTCCGTCTGTGTGTTGACACATGCCGTGGTGAGA
GATCAATATATCATACAAAATATAACAATATGTTCAACAGCATATTGGTG
AAATGGGGACCCAACTTTGAGATGGGGACCCTGGATTATAATGGAAATAG
GCTGTATCCTGAAGATCTGAAATTATGATCAGTCGAAAAAATCCTACGGC
TACTACTTCAAAATCGATTCCCCCCAGAGATCGGCCACTCGAATGCGTTC
TCTCGTTAATCGATCGGGGGCAAGTAAGACGTTTTCAGTATAGGACCCGC
TCCTCATCTAAAAAATTGGTTCCTCATTTTACCAACATACTGTTATATGT
ATAGTGGGTGATATCTACTAGAGCTAGGTGTCGAACCAACGCAGAATATA
GTACAGGTCCGATGATAGGAACCTATTATTTCAAGGGAAGCTCAAAATCT
TATTTTGGTGAAAATCGTGAGCAAAACACTGTTTCTTACTTTTATATAGG
AATTAATATAGGGCCACAATGTGGGTCCCATTTGTTAGGCTGGGTTTATT
GCGGGTTAGCAAAACATTAATCCCACTTTCCTTTTGGGGAATTTCTTGTT
GGTGGGCCCGTGCTTTATGAACAATATTAGACGAACACAATACTTAGTCA
AATCAACGCAGAACATACATACACTTGATACCTGTAGCTAACACCGATAT
GTTTTTGAGCTTGCGCTAGAACCTAGAATGTGCAGGGTGGTTTGAGACCA
ATCGAGGTTCCAAATGGTCAATTATGTGATATAAATAGGCCCTCTTTTTG
CAATGGCGCAGATGCGAACACTCTTGCTTCGCACACTACTTTAGGTTTGC
AACATAGCGGTGTCCAATGCTGACCCCAAGGCAAAATTGAATTTCTTGAG
TATAGAAACGCGAAAAATCTGCGCGATCGCAGAGCACACTTGAAAGTGAA
TTACGGAGTGCATCCTCTCCCTTGTTATCCTTATTCTCGCACGCACAATA
ACCACTAAATTGTGTAGATTCAAACAGACAGCCACTCGCGCAAATGCCAT
GGAAAAAAATGGCATCAGCACTTTGATGTGGCGCCGATTTTTGGGCGTTT
TGACGCGTAGCGCCGAAAAACAAAGTATTGATTGGTGCCTTGCCGTCAAA
GTGGTTTCGCGGGCCGCCGTAAATAGAGTGCGCTGTACCAGCTGATTCAG
CGCAAAGTCGAGGGTGGCAGGTCGGCGCCAGGGACCGTCAGACTCCCCAT
ATATGTCTCGGCCTGACTACTAGGTTTGTTCTTAAAATACATGCAAAATA
TAACTAATCAAAACAAGGATATGTCCGTGAAATGTATCATCTTCGTCATA
AAACATGTGTTGTGCAACATTGACGCTGCAATTCATTCTATCCCTGTGAC
CCATAACTGATTTGGTGACTGGTGTGGCTACTGTCAAAGCTATTCATCTT
TGGTCCACGAGCATGTTGCGTAAATCTATGCATTCGAAGAATCTCGGGGC
TTCCAAAATGAAGGAAAAATCCCTAAAATGGCTCGGGTCTTCCCATGGGG
AGGCTCAGGCCGGTGAAGGTCTCGATGGCTCCTGCGGGGTATTCGGCGCT
GCCTCCGGCGGGCCGAAAGGCCTCCAGTCGTTTCGTCGCCCAGATCTATT
TTGTTCACCAGTGTATGGCAATACCCATTTCGTGCATATTTCCCGACAAC
ACCGTCTCCTAACCAGGTCAGTAGGAAAGGCGCAGCTCCCTTCGTGCACG
ACGACAACGAGCATATATATCGCCCAACAGTGCCCTCAAAAGGCCTCGCC
GTGGAAGCACCTGCCACTCCATCATCTCGGGCACTTTTGTCCCGTAACAA
AAGCTGCAGTGCAACCGGTTTCGACGAGATTGGAACGGAAGCAAAGCTCG
CAGCTATGAAGGAAGCGTCGAGGCATTCTCGCTTGCAAATGCTTGCGAAC
GTCGAAATCTCACAACGATCAGGTCAGCGTATGAATGACGACAGGCCCCC
GAACATAATACATTGTCATTCTCGAAAGAAGGGAAACCTAAACGCAAGTT
CACCTTGAAGCATTGTCTACCCGGTTCTGCGGGGCATCCATTCGCTTGCT
GTGAAAACAACGGTTCTCGCTCTCTCTCAAAAAAAGAAGAATGAGTTAAT
CGCGACCTCGTTTTTCCCACGATTGCCTGAAAACTCGAATGTGCTCCACT
GCCCTAGATCCCCAGTAGCATGTCACTCTGATCATTGTCCCTCCTATTGT
GCAACACTGGATGCCCACAGAGCTCGGGGAAACAATTTGCGGACGAGGCG
AGTCTATCAAGAAACCGCTTCTATACCCGCAGGTGCGTGCAAACCCTGAA
TCCAAACTTCTGGGTTGTGTATTTGGAAATCTTCTGCTGACAGTTTGACG
TTACGTATGCGTAGTGCGTCATTCCGTGCGCGAAATGATACATGAAATAT
GAGGCATCTTGGGAGTAGTCGATTCCATTAGAGCCTGTTGCATCTTTTCA
ACATGATAACCCCGCGCACGCTAGTACAGATTTATCCGTTTTCGATATAC
GCGTACCCTTACAACATAAAAGAAAAGTCAATGACATAGTAGCATCCGCG
GCATACGCACGCTTGAACGTCTGACGTTTCGCTTGTTGTTCCTGACTAAT
TTACGCTCTCTTCCTCTGTTTCATAACTCAGACGGTGACGCACCAACAGG
CTCTAAACCTGGAGAAGAAGGCGGGCCCGAGGGCTCCGGTCGACGACATC
GCACTGCAGAGAAAACCGCCCACCACTGACGGTTCTATAGCACGAGCATT
TGAGCCTTGGAATCAGCACATGTACTTGCCGTACTCCAGAACACGGTCCG
ATTTTCCAAACCTGGCGTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig3209:11688..14757+ >mRNA_H-paniculata_contig3209.8638.1 ID=mRNA_H-paniculata_contig3209.8638.1|Name=mRNA_H-paniculata_contig3209.8638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at H-paniculata_contig3209:11688..14757+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTCGTCACAAGAGCAGGCCGCCACCTTCTTATCACTGGGAAGGGTT
TGGGAGGAAAAATACCAAACCTCCATGGTTTGATGTACGCACTTTCGACA
AAGAAAGACGGGATGTGGGTTGGGTTGTAAAGGACTTTGCTCCGCCCGGA
ACAAAGAAGGTGCGGAAATGATTCGTCACAAGAGCAGGCCGCCACCTTCT
TATCACTGGGAAGGGTTTGGGAGGAAAAATACCAAACCTCCATGGTTTGA
TGTACGCACTTTCGACAAAGAAAGACGGGATGTGGGTTGGGTTGTAAAGG
ACTTTGCTCCGCCCGGAACAAAGAAGGTGCGGAATAGGAAAGGCGCAGCT
CCCTTCGTGCACGACGACAACGAGCATATATATCGCCCAACAGTGCCCTC
AAAAGGCCTCGCCGTGGAAGCACCTGCCACTCCATCATCTCGGGCACTTT
TGTCCCGTAACAAAAGCTGCAGTGCAACCGGTTTCGACGAGATTGGAACG
GAAGCAAAGCTCGCAGCTATGAAGGAAGCGTCGAGGCATTCTCGCTTGCA
AATGCTTGCGAACGTCGAAATCTCACAACGATCAGTAGGAAAGGCGCAGC
TCCCTTCGTGCACGACGACAACGAGCATATATATCGCCCAACAGTGCCCT
CAAAAGGCCTCGCCGTGGAAGCACCTGCCACTCCATCATCTCGGGCACTT
TTGTCCCGTAACAAAAGCTGCAGTGCAACCGGTTTCGACGAGATTGGAAC
GGAAGCAAAGCTCGCAGCTATGAAGGAAGCGTCGAGGCATTCTCGCTTGC
AAATGCTTGCGAACGTCGAAATCTCACAACGATCAGAGCTCGGGGAAACA
ATTTGCGGACGAGGCGAGTCTATCAAGAAACCGCTTCTATACCCGCAGAG
CTCGGGGAAACAATTTGCGGACGAGGCGAGTCTATCAAGAAACCGCTTCT
ATACCCGCAGACGGTGACGCACCAACAGGCTCTAAACCTGGAGAAGAAGG
CGGGCCCGAGGGCTCCGGTCGACGACATCGCACTGCAGAGAAAACCGCCC
ACCACTGACGGTTCTATAGCACGAGCATTTGAGCCTTGGAATCAGCACAT
GTACTTGCCGTACTCCAGAACACGGTCCGATTTTCCAAACCTGGCGTAAA
CGGTGACGCACCAACAGGCTCTAAACCTGGAGAAGAAGGCGGGCCCGAGG
GCTCCGGTCGACGACATCGCACTGCAGAGAAAACCGCCCACCACTGACGG
TTCTATAGCACGAGCATTTGAGCCTTGGAATCAGCACATGTACTTGCCGT
ACTCCAGAACACGGTCCGATTTTCCAAACCTGGCGTAA back to top
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