prot_H-paniculata_contig3207.8634.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3207.8634.1
Unique Nameprot_H-paniculata_contig3207.8634.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: D8LDU1_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU1_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 6.090e-60
Identity = 96/116 (82.76%), Postives = 109/116 (93.97%), Query Frame = 0
Query:    1 MGGGGDGGNAIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGGGKDLTVPQYYAAGSLAAV 116
            MGG G GG+A+KDI+SGTVAGFAQVAVGHPLDT+KVRLQTQSSTNPEF+GM DCFRKT A+EG  GLYAGAA+PL GAMAHNAGVFFSYGM+K++VGGGK+LT+PQYYAAGSLAA+
Sbjct:    1 MGGDGGGGSALKDIMSGTVAGFAQVAVGHPLDTIKVRLQTQSSTNPEFSGMVDCFRKTMAREGASGLYAGAAAPLWGAMAHNAGVFFSYGMSKKIVGGGKELTIPQYYAAGSLAAI 116          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: A0A835Z5H4_9STRA (Carnitine/acylcarnitine carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H4_9STRA)

HSP 1 Score: 190 bits (482), Expect = 3.240e-58
Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 0
Query:    1 MGGGGDGGNAIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGGGKDLTVPQYYAAGSLAAV 116
            MGGGGD G+AIKDILSGTVAG AQV  GHPLDT+KVRLQTQSSTNPEF+GM DC RKT  +EG+ GLYAGAASPLLGAMAHNAGVFFSYGMAK +VGGGK+L++PQYY AGSLAA+
Sbjct:    1 MGGGGDSGSAIKDILSGTVAGIAQVVAGHPLDTIKVRLQTQSSTNPEFSGMGDCIRKTIQREGLMGLYAGAASPLLGAMAHNAGVFFSYGMAKDIVGGGKELSIPQYYLAGSLAAI 116          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: A0A2R5GTK5_9STRA (Mitochondrial substrate carrier family protein G n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTK5_9STRA)

HSP 1 Score: 126 bits (316), Expect = 3.240e-33
Identity = 73/119 (61.34%), Postives = 86/119 (72.27%), Query Frame = 0
Query:    5 GDGGNAIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPE----FAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGG---GKDLTVPQYYAAGSLAAV 116
            G G N + DI SGT  G AQV  GHPLDT+KVRLQTQ    P+    FAGMADC +KT++KEG+ GLY GAASPLLGAMAHNAGVFFSYG AK + G    G DL   +Y+ AG++AA+
Sbjct:    2 GGGRNTMIDIASGTAGGIAQVVAGHPLDTIKVRLQTQQP-GPDGKMPFAGMADCAKKTFSKEGVSGLYKGAASPLLGAMAHNAGVFFSYGQAKALTGANEVGADLY--KYWLAGAIAAI 117          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: A0A6B2LCD6_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCD6_9EUKA)

HSP 1 Score: 114 bits (284), Expect = 1.410e-28
Identity = 62/107 (57.94%), Postives = 73/107 (68.22%), Query Frame = 0
Query:   15 LSGTVAGFAQVAVGHPLDTVKVRLQTQ---SSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGGGK-----DLTVPQYYAAGSL 113
            +SGT+ G AQV  GHPLDTVKVRLQTQ       P+F GM DCF+KT   EG KGLY GA SPL GAMAHNAG+FF YG +K++V   K     DLT   Y+ AG++
Sbjct:    1 MSGTMGGVAQVLAGHPLDTVKVRLQTQVPVPGQPPQFNGMIDCFKKTVQHEGFKGLYKGAMSPLAGAMAHNAGIFFFYGQSKKIVAAKKNIHLADLTPKDYFTAGAM 107          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: A0A8J4PU31_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PU31_9MYCE)

HSP 1 Score: 106 bits (264), Expect = 1.640e-25
Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 0
Query:   10 AIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGGG---KDLTVPQYYAAGSLA 114
            A+KDI++G++ G  QV  GHPLDT+KVRLQTQS TNP ++G  DC RKT A+EG  GLY G ASPL+G    N+ +F SYG AK ++ G    ++L+V +   AG +A
Sbjct:   15 ALKDIVAGSIGGIGQVISGHPLDTIKVRLQTQSVTNPVYSGAMDCLRKTVAQEGALGLYKGVASPLVGLSIMNSVMFLSYGQAKNLILGSDKNRELSVAELTLAGCMA 122          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: UPI000644B470 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B470)

HSP 1 Score: 104 bits (260), Expect = 6.970e-25
Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 0
Query:   10 AIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGG-GKDLTVPQYYAAGSLA 114
            AIKDI++G++ G  QV  GHPLDTVKVRLQTQS  +P ++G  DCF+KT A EG  GLY G  SPL+G    NA +F +YG AK  +   GK+LTV +   AG +A
Sbjct:   15 AIKDIVAGSIGGVGQVITGHPLDTVKVRLQTQSVGSPLYSGTLDCFKKTIANEGFAGLYKGVQSPLVGLCFMNAVMFLAYGQAKSYIQKPGKELTVSELTMAGGVA 120          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: A0A196SIU8_BLAHN (Mitochondrial substrate carrier family protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SIU8_BLAHN)

HSP 1 Score: 104 bits (259), Expect = 1.050e-24
Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 0
Query:   12 KDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGGGKDLTVPQYYAAGSLAAV 116
            KD+++G   G   VAVGHP DT+KVRLQTQS+TNP + GM DC +KT   EG+ G Y G  SPL G M  NA  F  YG AK+ +G G+ L++P  + AG++  V
Sbjct:   13 KDLIAGCFGGIGIVAVGHPFDTIKVRLQTQSATNPLYTGMTDCIKKTVKWEGLGGFYKGFMSPLWGNMIFNAVQFIVYGQAKEAIGHGEILSLPNTFLAGAITGV 117          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: D3B5I3_POLPP (Mitochondrial substrate carrier family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B5I3_POLPP)

HSP 1 Score: 103 bits (256), Expect = 2.470e-24
Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 0
Query:   10 AIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGG--GKDLTVPQYYAAGSLA 114
            A+KDIL+G++ G  QV  GHPLDT+KVRLQTQ    P ++G  DC +KT A+EG  GLY G ASPL+G    NA +F SYG AK+++ G   ++L+V +   AG++A
Sbjct:   13 ALKDILAGSIGGVGQVFTGHPLDTIKVRLQTQPVGAPLYSGTLDCLKKTIAEEGFAGLYKGVASPLVGLCVMNAVMFLSYGQAKKIIQGDSNRELSVAELTKAGAVA 119          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: F0ZBC0_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZBC0_DICPU)

HSP 1 Score: 102 bits (254), Expect = 5.040e-24
Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = 0
Query:   10 AIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGG---GKDLTVPQYYAAGSLAAV 116
            A+KDI++G+V G  QV  GHPLDT+KVRLQTQ   NP ++G  DC RKT  +EG  GLY G ASPL+G    N+ +F +YG AK V+      K L++  + AAG+LA V
Sbjct:   13 ALKDIVAGSVGGIGQVFTGHPLDTIKVRLQTQPVGNPIYSGTMDCLRKTIQQEGFMGLYKGVASPLVGLSIMNSVMFLAYGQAKTVIQSLDPTKQLSIGGFTAAGALAGV 122          
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Match: F4QC21_CAVFA (Mitochondrial substrate carrier family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QC21_CAVFA)

HSP 1 Score: 102 bits (253), Expect = 6.710e-24
Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 0
Query:   10 AIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAGMADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGGG--KDLTVPQYYAAGSLA 114
            A KDI++G+V G AQ+  GHPLDT+KVRLQTQ    P ++G  DC +KT A+EG  GLY G  SPL+G    NA +FFSYG AK+ + G   ++L+V Q   AG++A
Sbjct:   14 AAKDIVAGSVGGVAQLVTGHPLDTIKVRLQTQPVGAPLYSGTMDCLKKTIAQEGFGGLYKGVTSPLVGLCLMNAVMFFSYGQAKKAIQGDSKEELSVEQLAKAGAIA 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3207.8634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDU1_ECTSI6.090e-6082.76Carnitine/acylcarnitine carrier protein n=1 Tax=Ec... [more]
A0A835Z5H4_9STRA3.240e-5881.90Carnitine/acylcarnitine carrier protein n=1 Tax=Tr... [more]
A0A2R5GTK5_9STRA3.240e-3361.34Mitochondrial substrate carrier family protein G n... [more]
A0A6B2LCD6_9EUKA1.410e-2857.94Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A8J4PU31_9MYCE1.640e-2551.85Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
UPI000644B4706.970e-2553.77hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A196SIU8_BLAHN1.050e-2450.48Mitochondrial substrate carrier family protein n=1... [more]
D3B5I3_POLPP2.470e-2450.47Mitochondrial substrate carrier family protein n=1... [more]
F0ZBC0_DICPU5.040e-2450.91Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
F4QC21_CAVFA6.710e-2451.40Mitochondrial substrate carrier family protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 4..116
e-value: 4.7E-25
score: 89.9
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 9..115
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 10..96
e-value: 1.2E-22
score: 79.6
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 8..95
score: 22.792
NoneNo IPR availablePANTHERPTHR45624:SF24MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN Gcoord: 10..115
NoneNo IPR availablePANTHERPTHR45624FAMILY NOT NAMEDcoord: 10..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3207contigH-paniculata_contig3207:10819..18741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3207.8634.1mRNA_H-paniculata_contig3207.8634.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3207 10504..18741 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3207.8634.1 ID=prot_H-paniculata_contig3207.8634.1|Name=mRNA_H-paniculata_contig3207.8634.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MGGGGDGGNAIKDILSGTVAGFAQVAVGHPLDTVKVRLQTQSSTNPEFAG
MADCFRKTWAKEGIKGLYAGAASPLLGAMAHNAGVFFSYGMAKQVVGGGK
DLTVPQYYAAGSLAAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier