prot_H-paniculata_contig32053.8630.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig32053.8630.1
Unique Nameprot_H-paniculata_contig32053.8630.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A7S0QH02_9CRYP (Alanine--tRNA ligase (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QH02_9CRYP)

HSP 1 Score: 117 bits (292), Expect = 8.530e-32
Identity = 50/56 (89.29%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKPIFLGQ DP+SP ASLRRAVNSQKCIRAGGKHNDL+DVGKD YHHT+FEMLGTW
Sbjct:   57 FKPIFLGQIDPSSPMASLRRAVNSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGTW 112          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A7S0HEE2_9CRYP (Alanine--tRNA ligase (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HEE2_9CRYP)

HSP 1 Score: 112 bits (280), Expect = 8.200e-30
Identity = 48/56 (85.71%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKPIFLGQ DP S  ASL+RAVN+QKCIRAGGKHNDLDDVGKD YHHT+FEMLGTW
Sbjct:   74 FKPIFLGQADPNSKMASLKRAVNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGTW 129          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: D8LCV6_ECTSI (Alanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV6_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.470e-29
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKP+FLGQTDP+SP A L+RAVNSQKCIRAGGKHNDLDDVG+DVYHHT+FEMLGTW
Sbjct:  197 FKPVFLGQTDPSSPLAGLKRAVNSQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGTW 252          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A7R9U3E4_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3E4_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.500e-29
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKPIF+G+ DP+SP A L RAVNSQKCIRAGGKHNDLDDVG D YHHT+FEMLGTW
Sbjct:   21 FKPIFVGKVDPSSPLAKLERAVNSQKCIRAGGKHNDLDDVGLDTYHHTFFEMLGTW 76          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A3P7JBC9_STRVU (Alanine--tRNA ligase (Fragment) n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7JBC9_STRVU)

HSP 1 Score: 107 bits (266), Expect = 4.510e-29
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKP+FLG  DP S  A L+RAVN+QKCIRAGGKHNDLDDVGKDVYHHT+FEMLG W
Sbjct:   26 FKPLFLGVADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNW 81          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A7S1G8F7_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8F7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.380e-29
Identity = 48/56 (85.71%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKPIFLGQ DPA P A L+RA NSQKCIRAGGKHNDLDDVGKDVYHHT+FEMLG W
Sbjct:  223 FKPIFLGQVDPAGPQAGLKRAANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNW 278          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A6A5ADU7_9STRA (Alanine--tRNA ligase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ADU7_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.580e-29
Identity = 46/56 (82.14%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            +KPIFLGQ DP+ P + L RAVNSQKCIRAGGKHNDLDDVGKDVYHHT+FEMLG W
Sbjct:   87 YKPIFLGQVDPSHPMSKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNW 142          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A2R5L0D8_9CRUS (Alanine--tRNA ligase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2R5L0D8_9CRUS)

HSP 1 Score: 112 bits (279), Expect = 8.630e-29
Identity = 47/56 (83.93%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKPIFLGQ +P SPF  L RAVNSQKCIRAGGKHNDLDDVGKD YHHT+FEMLG+W
Sbjct:   62 FKPIFLGQIEPGSPFIGLNRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGSW 117          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A7R9UHF7_DIALT (Alanine--tRNA ligase (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UHF7_DIALT)

HSP 1 Score: 114 bits (284), Expect = 1.220e-28
Identity = 49/56 (87.50%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKPIFLGQ DP SP A L RAVNSQKCIRAGGKHNDLDDVGKDVYHHT+FEMLG W
Sbjct:   75 FKPIFLGQADPKSPLAKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNW 130          
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Match: A0A6J1WBC3_9SAUR (Alanine--tRNA ligase n=1 Tax=Notechis scutatus TaxID=8663 RepID=A0A6J1WBC3_9SAUR)

HSP 1 Score: 107 bits (266), Expect = 1.380e-28
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGTW 56
            FKPIFL   DP+ P A L RAVN+QKCIRAGGKHNDLDDVGKDVYHHT+FEMLG+W
Sbjct:   48 FKPIFLNTIDPSHPMAKLTRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSW 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32053.8630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0QH02_9CRYP8.530e-3289.29Alanine--tRNA ligase (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0HEE2_9CRYP8.200e-3085.71Alanine--tRNA ligase (Fragment) n=1 Tax=Hanusia ph... [more]
D8LCV6_ECTSI1.470e-2987.50Alanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7R9U3E4_9STRA2.500e-2982.14Alanine--tRNA ligase (Fragment) n=1 Tax=Pinguiococ... [more]
A0A3P7JBC9_STRVU4.510e-2980.36Alanine--tRNA ligase (Fragment) n=1 Tax=Strongylus... [more]
A0A7S1G8F7_9STRA6.380e-2985.71Alanine--tRNA ligase (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6A5ADU7_9STRA6.580e-2982.14Alanine--tRNA ligase n=1 Tax=Aphanomyces astaci Ta... [more]
A0A2R5L0D8_9CRUS8.630e-2983.93Alanine--tRNA ligase (Fragment) n=1 Tax=Hirondelle... [more]
A0A7R9UHF7_DIALT1.220e-2887.50Alanine--tRNA ligase (Fragment) n=1 Tax=Diacronema... [more]
A0A6J1WBC3_9SAUR1.380e-2880.36Alanine--tRNA ligase n=1 Tax=Notechis scutatus Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminalPFAMPF01411tRNA-synt_2ccoord: 1..56
e-value: 3.4E-24
score: 85.3
NoneNo IPR availableGENE3D3.30.930.10coord: 1..56
e-value: 1.7E-23
score: 85.3
NoneNo IPR availablePANTHERPTHR11777ALANYL-TRNA SYNTHETASEcoord: 1..56
NoneNo IPR availablePANTHERPTHR11777:SF9ALANINE--TRNA LIGASE, CYTOPLASMICcoord: 1..56
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32053contigH-paniculata_contig32053:2300..2470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32053.8630.1mRNA_H-paniculata_contig32053.8630.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig32053 2300..2470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig32053.8630.1 ID=prot_H-paniculata_contig32053.8630.1|Name=mRNA_H-paniculata_contig32053.8630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
FKPIFLGQTDPASPFASLRRAVNSQKCIRAGGKHNDLDDVGKDVYHHTYF
EMLGTW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018164Ala-tRNA-synth_IIc_N