mRNA_H-paniculata_contig32053.8629.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: D8LCV6_ECTSI (Alanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV6_ECTSI) HSP 1 Score: 131 bits (330), Expect = 5.760e-34 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFKEEA+ W F+AL FGLP DRLYATYFGGDE+LGL PDLE RD+WLKVLPE+RV+PGDRKDNFWE+
Sbjct: 253 SFGDYFKEEAVEWGFEALNE-VFGLPADRLYATYFGGDEELGLAPDLETRDLWLKVLPEDRVMPGDRKDNFWEM 325
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A7S3TBJ3_9SPIT (Alanine--tRNA ligase (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TBJ3_9SPIT) HSP 1 Score: 119 bits (298), Expect = 1.250e-32 Identity = 55/74 (74.32%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFKEEAI WA++ LT +G+PGDRLYATYF GDE LGLPPD EAR WLK LPE RVLPG KDNFWE+
Sbjct: 91 SFGDYFKEEAIDWAWELLTK-VYGVPGDRLYATYFEGDESLGLPPDEEARQFWLKYLPEGRVLPGSSKDNFWEM 163
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A1S4DWP3_CUCME (Alanine--tRNA ligase n=1 Tax=Cucumis melo TaxID=3656 RepID=A0A1S4DWP3_CUCME) HSP 1 Score: 111 bits (277), Expect = 7.750e-30 Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFK+EAI WA++ LT + LP DR+YATYFGGDEK GL PD EARD+WLK LP ERVLP KDNFWE+
Sbjct: 60 SFGDYFKKEAITWAWELLTQ-VYKLPTDRIYATYFGGDEKAGLAPDNEARDIWLKFLPAERVLPFGCKDNFWEM 132
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A7S0SRE6_9STRA (Alanine--tRNA ligase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRE6_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.300e-29 Identity = 53/74 (71.62%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFKEEAI WA+D L + LP DRLYA+YFGGDE LG+P DLEARD WLK LP ERVLP D+K NFWE+
Sbjct: 127 SFGDYFKEEAIDWAYDILVN-VYKLPPDRLYASYFGGDESLGIPADLEARDYWLKYLPNERVLPFDKKANFWEM 199
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A7S0LGZ1_9EUKA (Alanine--tRNA ligase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGZ1_9EUKA) HSP 1 Score: 110 bits (276), Expect = 1.550e-29 Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFK EA+ WA++ T +GLP DR YATYF GDEKLGL PD EAR +WL+ LP ERVLPG+ KDNFWE+
Sbjct: 60 SFGDYFKTEAVDWAWELFTQ-VYGLPEDRFYATYFEGDEKLGLAPDEEARQLWLRYLPPERVLPGNAKDNFWEM 132
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A812IYE8_SYMPI (Alanine--tRNA ligase (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IYE8_SYMPI) HSP 1 Score: 114 bits (285), Expect = 2.320e-29 Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFKEEAI WA++ LT +GL +RLYA+YF GDE+LGLPPDLEA++MW K LP ERVLP DRKDNFWE+
Sbjct: 20 SFGDYFKEEAIDWAWELLTE-VYGLDPNRLYASYFSGDEELGLPPDLEAKEMWEKRLPPERVLPFDRKDNFWEM 92
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A6A2X108_HIBSY (Alanine--tRNA ligase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X108_HIBSY) HSP 1 Score: 117 bits (292), Expect = 5.330e-29 Identity = 54/74 (72.97%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFKEEAI WA++ LT +GLP DR+YATYFGGDEK+GLPPD EARD+WLK LP RVLP KDNFWE+
Sbjct: 162 SFGDYFKEEAIEWAWELLTK-VYGLPTDRIYATYFGGDEKVGLPPDNEARDLWLKFLPPGRVLPFGCKDNFWEM 234
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A3B1DZ45_9ZZZZ (Alanine--tRNA ligase (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DZ45_9ZZZZ) HSP 1 Score: 115 bits (289), Expect = 5.390e-29 Identity = 52/74 (70.27%), Postives = 61/74 (82.43%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFK EAI WA+D LT +GLPG+++YATYF GDEK GL PD EARD+WL+ LP ERVLPG+ KDNFWE+
Sbjct: 105 SFGDYFKAEAIEWAWDLLTR-VYGLPGEQMYATYFEGDEKAGLEPDHEARDLWLRYLPPERVLPGNMKDNFWEM 177
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A7R9YH73_DIALT (Alanine--tRNA ligase (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YH73_DIALT) HSP 1 Score: 108 bits (271), Expect = 5.650e-29 Identity = 50/74 (67.57%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFK EA+ WAF+ LT FGL +RLYATYF GD GL PDLEARD+W K+LPE VLPG+ KDNFWE+
Sbjct: 20 SFGDYFKTEAVEWAFELLTS-EFGLDKNRLYATYFEGDAAQGLEPDLEARDLWRKLLPESHVLPGNAKDNFWEM 92
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Match: A0A835ZLN6_9STRA (Alanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLN6_9STRA) HSP 1 Score: 117 bits (292), Expect = 7.770e-29 Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = 1
Query: 1 SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARDMWLKVLPEERVLPGDRKDNFWEV 222
SFGDYFKEEAI WA+D LT + LP DRLYATYFGGDE +GLP D EARD WLKVLP +R+LP DRK NFWE+
Sbjct: 129 SFGDYFKEEAIEWAWDILTR-VYALPPDRLYATYFGGDEAMGLPADNEARDFWLKVLPADRILPFDRKANFWEM 201 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32053.8629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32053.8629.1 >prot_H-paniculata_contig32053.8629.1 ID=prot_H-paniculata_contig32053.8629.1|Name=mRNA_H-paniculata_contig32053.8629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp SFGDYFKEEAIAWAFDALTGGAFGLPGDRLYATYFGGDEKLGLPPDLEARback to top mRNA from alignment at H-paniculata_contig32053:980..1201- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32053.8629.1 ID=mRNA_H-paniculata_contig32053.8629.1|Name=mRNA_H-paniculata_contig32053.8629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=222bp|location=Sequence derived from alignment at H-paniculata_contig32053:980..1201- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32053:980..1201- >mRNA_H-paniculata_contig32053.8629.1 ID=mRNA_H-paniculata_contig32053.8629.1|Name=mRNA_H-paniculata_contig32053.8629.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=444bp|location=Sequence derived from alignment at H-paniculata_contig32053:980..1201- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |