prot_H-paniculata_contig11335.862.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11335.862.1
Unique Nameprot_H-paniculata_contig11335.862.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length290
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11335.862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..199
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 220..290
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..219
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..85
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
NoneNo IPR availableTMHMMTMhelixcoord: 57..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11335contigH-paniculata_contig11335:3362..4605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11335.862.1mRNA_H-paniculata_contig11335.862.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11335 3362..4606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11335.862.1 ID=prot_H-paniculata_contig11335.862.1|Name=mRNA_H-paniculata_contig11335.862.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
QYRTQLETEQIVPEVPSTRWAVYLMMISFIGMVFLINQDGMMAHIAWMVE
WVKPRMLTCWGWATSFCGFTLSCWDDARMDFWPHELGVMVVFCFTGTWLL
WECLVWQLSASTSPEHELCQGLLPSGRPNGPRSCIPDEVYLPIMVVVVNG
VMGVVAMTLRIILQSLWDITAGGLSATYSAVEVARDPATAIRIQQEWRRF
VAALVWVAAALVCVTLSPACASRVLVGCVKTLRRSLKATLRRQPYQPQCG
GGGKRWQRARSRDVGDLTMLSPVQRGEDVALLHWKFPRLW
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