prot_H-paniculata_contig320.8615.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig320.8615.1
Unique Nameprot_H-paniculata_contig320.8615.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length450
Homology
BLAST of mRNA_H-paniculata_contig320.8615.1 vs. uniprot
Match: A0A6H5K407_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K407_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.450e-11
Identity = 167/487 (34.29%), Postives = 220/487 (45.17%), Query Frame = 0
Query:   37 AAPVSPTSSQGSWVVQIEDGGWDGLGRSPPLSPHRQMQGFQLTPQHQ---QEHSPRKGPISPSG---SWAGVVVAVGVGAPSSSVLAVEYPRSPSPPGSPGMVKS----------------------EGLADLARDEVQVSIDGLAAAL-------------DDAVMRG-LEKVDGADHHRRTSVEVQLAPEAQDDSTECSAVAAVRERKRPGESKVDDGAAVEYGAISDGPVNVQDATSSAAAEGIVHVAAPEQASLAVAGSGSGTASIAVVNTSATPTVVPKGTGITPAARTAAK--TLPRT-GTPPITAS--------PRRSVSGSSI---------------VGPQGGESASLTRLPGGN--PRD------VEEEYEGRSMDKIWRWTAVVTAAKMGVIPIIVYAALAAISSQTGGGDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCCFPSMRADR--HGFMPMPYSIAPSI 445
            AAP SPTSSQGSWVV  +DG WD  G S  + P+       + P  +   +EH  R+ P+SPS    SWA V ++     P++   A+    + SPP SPG V+S                      EGL  LARDE   ++D   A L             D A   G + +       R   +E   A EAQ  S       A              GAA     +S  P    +A    AA G+    A E  + A   +G    S+ +  T+ +P+    G          A+  T  R  G+P  TA+        P R++S S+                +     ES ++    G    P D      V+ +    + D++WRWT  +TAAKMGVIPIIV A +AA+S+Q+  GD R XXXXXXXXXXXXXXXXXXX       XXXXXXXXX  CFP +R DR  +G MPMPY +APS+
Sbjct:   24 AAPSSPTSSQGSWVVDPDDG-WDDSG-STNVGPNELPPSAAVPPSPESPRREHH-RRTPLSPSSPLRSWAQVPMSP----PAAEYPAMTTSTANSPPPSPGSVRSLKSVGSVSSDGGGGSSRRSVAGEGLVALARDE-NPTLDTTGALLLTPRLASKVMDTSDSAAPTGAVSRSPAVLAPRSLPLETFEALEAQGFSGAWGGAGAGSASTGQDREVDGVGAATAGMDVSGFPDPADEAFVMTAAPGMTAAEAVEAIAEAAELTGITPTSVVLSRTTMSPSRASSGRPSPNEGEEKAQGVTFRRAHGSPAATAAAARFRAREPLRNLSSSTANTAXXXXXGVARVPDIDASRDESVTVPAASGSTYIPMDTAVGMGVDVDDVDGTYDRLWRWTGFLTAAKMGVIPIIVCATVAALSTQSSSGD-RGXXXXXXXXXXXXXXXXXXXGTRCSSRXXXXXXXXXXGCFPDVRIDRCVYGGMPMPYCVAPSV 501          
BLAST of mRNA_H-paniculata_contig320.8615.1 vs. uniprot
Match: D7FYP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP0_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.280e-8
Identity = 168/492 (34.15%), Postives = 217/492 (44.11%), Query Frame = 0
Query:   37 AAPVSPTSSQGSWVVQIEDGGWDGLGRSPPLSPHRQMQGFQLTPQHQQ---EHSPRKGPIS-PSGSWAGVVVAVGVGAPSSSVLAVEYPR-----SPSPPGSPGMVKS---------------------EGLADLARDEVQV--SIDGLAAALDDAVMRGLEKVDGADHHRRTSVEV-QLAPEAQDDSTECSAVAAVRERKRPGESKVDDGAAVEYGAISDGPVNVQ-------DATSSAAAEGIVHVAAPEQASLAVAGSGSGTASIAVVNTSATPTVVPKGTGITPAARTAAK--TLPRTGTPPITA------------SPRRSVSGSSIVGPQGGESASLTRLPGGNP-RDVEEEYEGRS--------------------------MDKIWRWTAVVTAAKMGVIPIIVYAALAAISSQTGGGDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCCFPSMRADR--HGFMPMPYSIAPSI 445
            AAP SPTSSQGSWVV  +DG WD  G S  +SP+       + P  +    EH  R  P S P  SWA V +         S  A EYP      + SPP SPG V+S                     EGL  LARDE     +   L + + D       +  G+      +V V +L P    ++ E    +    R   G +    G  V+    +   ++V        +A    AA G+    A E  + A   +G    S+ +  T+ +P+    G          A+  T  R  + P  A             P R++S SS             R+P  +P RD        S                           D++WRWT  +TAAKMGVIPIIV A +AA+S+Q+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  CFP +R DR  +G MPMPY +APS+
Sbjct:   23 AAPSSPTSSQGSWVVDPDDG-WDDSG-SANVSPNELAPSAAVPPSPESPRGEHHGRTTPSSSPLRSWAQVPM---------SPPAAEYPAMTTNTANSPPPSPGSVRSLKSAGSVSSGGGGSSRGSVAGEGLVALARDENPTPDTTPPLTSNVMDTSDSAAPRAVGSHSSHSPAVLVPRLLPFETFEALEAQGFSGAWGRAGAGSASTGQGREVDGVGAATAGMDVSGFADPADEAFVMTAAPGMTAAEAVEAIAEAAELTGVTPTSVVLSRTTVSPSRASSGRPSPNEGEEKAEGVTFRRANSSPTAAXXXXXXXRFRAREPLRNLSASSTANXXXXXXXXXXRVPDIDPSRDDSVTVPAASGSTCIPMDTAVGMXXXXXXXXXXXGTYDRLWRWTGFLTAAKMGVIPIIVCATVAALSTQSXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFPDVRIDRCVYGGMPMPYCVAPSV 502          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig320.8615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K407_9PHAE2.450e-1134.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYP0_ECTSI1.280e-834.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig320contigH-paniculata_contig320:951..7296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig320.8615.1mRNA_H-paniculata_contig320.8615.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig320 586..10059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig320.8615.1 ID=prot_H-paniculata_contig320.8615.1|Name=mRNA_H-paniculata_contig320.8615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=450bp
MDPGSRTDEVAPVVEGAEFATVEMPVSMDDIAPTLPAAPVSPTSSQGSWV
VQIEDGGWDGLGRSPPLSPHRQMQGFQLTPQHQQEHSPRKGPISPSGSWA
GVVVAVGVGAPSSSVLAVEYPRSPSPPGSPGMVKSEGLADLARDEVQVSI
DGLAAALDDAVMRGLEKVDGADHHRRTSVEVQLAPEAQDDSTECSAVAAV
RERKRPGESKVDDGAAVEYGAISDGPVNVQDATSSAAAEGIVHVAAPEQA
SLAVAGSGSGTASIAVVNTSATPTVVPKGTGITPAARTAAKTLPRTGTPP
ITASPRRSVSGSSIVGPQGGESASLTRLPGGNPRDVEEEYEGRSMDKIWR
WTAVVTAAKMGVIPIIVYAALAAISSQTGGGDGRERGDRGGGGGGEGRGG
GGGGATRCSSRKRPRGGGGGNCCFPSMRADRHGFMPMPYSIAPSIFVMV*
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