prot_H-paniculata_contig3198.8605.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3198.8605.1
Unique Nameprot_H-paniculata_contig3198.8605.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length226
Homology
BLAST of mRNA_H-paniculata_contig3198.8605.1 vs. uniprot
Match: D8LF98_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF98_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 3.580e-109
Identity = 165/216 (76.39%), Postives = 190/216 (87.96%), Query Frame = 0
Query:    6 KGGIIDKFSTSRRRLKENLAQKTGKEVADNSEFQERALKVENLKEQVTKVRDAMKRQLDCSRALCLACAELGNACSEANVRDVQFQNTQYQLDEDIRKKLDEAIVTALESLESKLAPFGELEKMVTNRNRLKLDYDHYLRKVRDLKEKPASDAAKLSNNEAKLNAARQRLQESTSRLYKGFGYYDAIGGTLCQPEIEMFKKAQQQFFAAALEAVSN 221
            KGGIIDKFST RRRLKEN+AQKTGKE  DNSEF+ER+ +V +LKE+V KVRDAMKRQLDCSRALCLACA+LGNACSE  +RDV FQN Q+QLDED+RK+LD A+  A+ESLE+K+APF EL+KM+ +RN+LKLDYDHY+RKVRDLKEKP SDAAKLSNNEAKL AARQRLQE+T +LYKGFGYYDA+GGTLCQPEIEM K+AQQ FF +A   V  
Sbjct:   43 KGGIIDKFSTGRRRLKENIAQKTGKEAVDNSEFEERSQRVADLKEKVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKG 258          
BLAST of mRNA_H-paniculata_contig3198.8605.1 vs. uniprot
Match: A0A835YV50_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV50_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.270e-61
Identity = 111/220 (50.45%), Postives = 151/220 (68.64%), Query Frame = 0
Query:    3 NSNKG-GIIDKFSTSRRRLKENLAQKTGKEVADNSEFQERALKVENLKEQVTKVRDAMKRQLDCSRALCLACAELGNACSEANVRDVQFQNTQYQLDEDIRKKLDEAIVTALESLESKLAPFGELEKMVTNRNRLKLDYDHYLRKVRDLKEKPASDAAKLSNNEAKLNAARQRLQESTSRLYKGFGYYDAIGGTLCQPEIEMFKKAQQQFFAAALEAVSN 221
            N N G GI  K + +RRR  E L QK GKE  D+++F++R    ++L  +V KVRD+MK  LD +RA+     +L NAC +A+ RD  F  TQ QLD+ +R  LD+++  AL+SL+ KLAPF EL++ V  RN LKLDYDHY+RKVR+LKEK  +DA+K++NNE KL AAR  + ++T  +YK F YYDA+GG L  PE+E FK AQ+ F+ AAL  V +
Sbjct:   31 NDNSGAGIKGKMAVNRRRFNEKLGQKMGKEGTDDADFEDRHRATQDLHFKVCKVRDSMKALLDATRAMSQRAVDLSNACGDADARDQDFITTQLQLDQAMRSMLDDSVGKALDSLDRKLAPFKELDERVKTRNNLKLDYDHYVRKVRELKEKSGADASKIANNEMKLEAARVAVHKATLSVYKAFNYYDAVGGRLVAPEVEAFKAAQRAFYMAALNCVKD 250          
BLAST of mRNA_H-paniculata_contig3198.8605.1 vs. uniprot
Match: A0A6G0WWC6_9STRA (BAR domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWC6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.240e-9
Identity = 61/240 (25.42%), Postives = 114/240 (47.50%), Query Frame = 0
Query:    8 GIIDKFSTSRRRLKENLAQKTGK-EVADNSEFQERALKVENLKEQVTKVRDAMKRQLDCSRALCLACAELGNACS----EANV-RDV-------------------QFQNTQYQLDEDIRKKLDEAI-VTALESLESKLAPFGELEKMVTNRNRLKLDYDHYLRKVRDLKEKPASDAAKLSNNEAKLNAARQRLQESTSRLYKGFGYYDAIGGTLCQPEIEMFKKAQQQFFAAALEAVSN 221
            G++DK  +++RR  +    K GK E +D+ E+Q+       L+++  ++ D ++  L   ++       LG  C+    + NV RD                    +F  +  ++D   R+     +  T + ++++KL      +K + +R RLKLDYD  +RK+R  +E    +AA +   + KL AA+ +L EST+ +       +   GT+ Q E++ F++ Q QFF   + A + 
Sbjct:   15 GLMDKIRSAKRRFIQKALTKIGKAECSDDHEYQQ-------LRDRQLELIDTVEHMLTHMKSFVTTLVSLGYGCTLLGEDMNVIRDNNAVKSPSYGVKPLNDCASNEFSQSMNRIDNAARELAASMLSTTVVANMQTKLDELHGFKKELEHRERLKLDYDSAVRKLRHAREH--REAADVLRRDQKLQAAQAKLAESTALMVAKMKECEGTRGTMLQREVDDFRQMQAQFFQLCVSAFTG 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3198.8605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LF98_ECTSI3.580e-10976.39SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YV50_9STRA3.270e-6150.45SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6G0WWC6_9STRA2.240e-925.42BAR domain-containing protein n=1 Tax=Aphanomyces ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..153
NoneNo IPR availableCOILSCoilCoilcoord: 158..181
NoneNo IPR availablePANTHERPTHR47174FAMILY NOT NAMEDcoord: 16..216
NoneNo IPR availablePANTHERPTHR47174:SF3BRIDGING INTEGRATOR 3coord: 16..216
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 6..223
e-value: 5.4E-23
score: 83.7
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 34..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3198contigH-paniculata_contig3198:301..3334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3198.8605.1mRNA_H-paniculata_contig3198.8605.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3198 301..3340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3198.8605.1 ID=prot_H-paniculata_contig3198.8605.1|Name=mRNA_H-paniculata_contig3198.8605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
MDNSNKGGIIDKFSTSRRRLKENLAQKTGKEVADNSEFQERALKVENLKE
QVTKVRDAMKRQLDCSRALCLACAELGNACSEANVRDVQFQNTQYQLDED
IRKKLDEAIVTALESLESKLAPFGELEKMVTNRNRLKLDYDHYLRKVRDL
KEKPASDAAKLSNNEAKLNAARQRLQESTSRLYKGFGYYDAIGGTLCQPE
IEMFKKAQQQFFAAALEAVSNTFFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf