prot_H-paniculata_contig319.8590.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig319.8590.1
Unique Nameprot_H-paniculata_contig319.8590.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length896
Homology
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: D8LB19_ECTSI (Similar to RING finger protein 122 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB19_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.190e-44
Identity = 109/201 (54.23%), Postives = 132/201 (65.67%), Query Frame = 0
Query:  685 QDVNEDMATALRLAKQEEEEQAREDAQLALRLTEFEEAGREQRAERAR----RXXXXXXXXXXXXYAQSAGLDPAVAAAAFAAEGSAVPEAVRALQFQDIDENDFETLLELDAGGGASGGCCSGEKGLSEAVLEATLQPVEASGARLTESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCPADMQPVVHDSSQ 881
            Q ++ED A A R AKQE+E QARED  LALRL   EEAG E+RA R R                 Y       PAVA+AA    G  + +AVRALQFQDIDENDFETLL LD  GG  G CC+G KGL++  +EA LQ  +A+GARL ESCA+CM ++  GD+++VLPCLHAFH  CIRKWLL+RN CP  ++ V+ DS Q
Sbjct:  770 QGIDEDEAAARRFAKQEQEAQAREDELLALRLAAREEAGAERRASRRRVQRRSNASSARRNSIPGYISPDSNHPAVASAA----GGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ 966          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: A0A6H5L8B3_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B3_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 6.090e-35
Identity = 76/120 (63.33%), Postives = 93/120 (77.50%), Query Frame = 0
Query:  763 AEGSA-VPEAVRALQFQDIDENDFETLLELDAGGGASGGCCSGEKGLSEAVLEATLQPVEASGARLTESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCPADMQPVVHDSSQ 881
            AEG+A V +A+RALQFQDIDENDFETLL LD  GG  G CC+G KGL+E  +EA LQ   A+GARL ESCA+CM ++  GD+++VLPCLHAFH  CIRKWLL+RN CP  ++ V+ DS Q
Sbjct:  850 AEGAAAVSDAIRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLAEEAMEAALQAGTAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSPQ 969          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: A0A2U1LV71_ARTAN (Zinc finger, RING/FYVE/PHD-type n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LV71_ARTAN)

HSP 1 Score: 75.5 bits (184), Expect = 2.090e-12
Identity = 42/102 (41.18%), Postives = 56/102 (54.90%), Query Frame = 0
Query:  769 PEAVRALQFQD-IDENDFETLLELDAGGGASGGCCSGEKGLSEAVLEATLQPVEASGARLTESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCP 869
            P A+  L+F   + E+D   L E    G  SG   S EK L    L  T+  V+       + CAIC++ YEE +K+A L C H FH ECI+ WLLL+N+CP
Sbjct:   28 PNALAFLEFMGGLPESDLVVLAERLNSGAISGSGLSEEKILEH--LNVTMTQVKKCEGEEVDDCAICLSGYEENEKMATLQCGHGFHVECIKSWLLLKNVCP 127          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: UPI001BF9D1CC (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF9D1CC)

HSP 1 Score: 66.2 bits (160), Expect = 1.420e-9
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 0
Query:  779 DIDENDFETLLELDAGGGASGGCCSGE--KGLSEAVLEATLQPVEAS---GARL-TESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCP 869
            DID   +E LL L+         C G    GLSE  +    +  + S   G++L  E C IC  +Y EGD L  L C H FHT+CI++WL+ +NLCP
Sbjct:    4 DIDNMSYEELLALEE--------CIGNVSSGLSEETILNRRRQRKCSIAVGSQLDAEPCCICQEEYNEGDDLGTLECGHNFHTDCIKQWLMTKNLCP 92          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: UPI001929A817 (probable E3 ubiquitin-protein ligase HIP1 isoform X1 n=4 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929A817)

HSP 1 Score: 72.0 bits (175), Expect = 2.910e-9
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 0
Query:  779 DIDENDFETLLEL-DAGGGASGGCCSGEKGLSEAVLEATLQPVEASGARLTES------CAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCPADMQPVVHDSSQE 882
            DID   +E LL L D  G  S        GLSE  + + L   +    ++T        CAIC+A+YEEG+ L +L C H FH  CI++WL+++N+CP    P + D+ +E
Sbjct:  441 DIDSMSYEELLALEDRIGNVS-------TGLSENTISSCLAETKYLSKQVTVGDDAEVKCAICLAEYEEGEHLGMLKCSHDFHFHCIKQWLVMKNVCPICKAPALADTCKE 544          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: D7SVW0_VITVI (RING-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=D7SVW0_VITVI)

HSP 1 Score: 67.8 bits (164), Expect = 6.130e-9
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 0
Query:  779 DIDENDFETLLEL-DAGGGASGGCCSGEKGLSEAVLEATLQPVEASGARLT-----ESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCP 869
            D+D   +E LL L D  G  S        GL+E  ++A L+P + S   +      E C IC  +YEEG+ + +L C H FH++CI++WL+ +NLCP
Sbjct:  123 DVDNMSYEELLALEDHIGNVS-------TGLNEDAIKAKLKPKKYSSFTMGPPVEGEICCICQEEYEEGETMGILDCGHEFHSDCIKQWLVQKNLCP 212          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: A0A2I0VU68_9ASPA (E3 ubiquitin ligase BIG BROTHER-related n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VU68_9ASPA)

HSP 1 Score: 64.3 bits (155), Expect = 7.100e-9
Identity = 35/97 (36.08%), Postives = 50/97 (51.55%), Query Frame = 0
Query:  779 DIDENDFETLLELDAGGGASGGCCSGEKGLSEAVLEATLQPVEASGARLT------ESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCP 869
            D+D   +E LL L+   G          GL+E  +  +L+  + S   L       E C IC  DY EG+ +  L C H FHT+CI++WL+ +NLCP
Sbjct:    4 DVDNMSYEELLALEERIGYV------NTGLNEETILKSLRQRKYSPCNLEVASAEKEPCCICREDYSEGEGIGTLDCRHDFHTDCIKQWLMFKNLCP 94          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: UPI001C7252F4 (E3 ubiquitin-protein ligase MBR2-like isoform X1 n=3 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C7252F4)

HSP 1 Score: 65.1 bits (157), Expect = 8.290e-9
Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0
Query:  779 DIDENDFETLLELDAGGGASGGCCSGEKGLSEAVLEATLQPVEAS---GARL-TESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCP 869
            D+D   +E LL L+   G      +   GLSE  +   L+  + S   G++L  + C IC  +Y EGD L  L C H FHT+CI++WL+ +NLCP
Sbjct:   36 DVDSMSYEELLALEERIG------NVSTGLSEETILNRLRQRKCSIAVGSQLDAKPCCICQEEYNEGDDLGTLECGHNFHTDCIKQWLMTKNLCP 124          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: A0A835C0D1_9POAL (RING-type domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835C0D1_9POAL)

HSP 1 Score: 65.5 bits (158), Expect = 9.840e-9
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
Query:  829 ESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCP 869
            E CA+C   YEEGDK++ +PC HAFH  CIR+WL + +LCP
Sbjct:   99 EECAVCWESYEEGDKMSAMPCSHAFHDGCIRRWLAISSLCP 139          
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Match: UPI001E820703 (Uncharacterized protein n=1 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI001E820703)

HSP 1 Score: 64.7 bits (156), Expect = 1.160e-8
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0
Query:  779 DIDENDFETLLELDAGGGASGGCCSGEKGLSEAVLEATLQPVEASGARLT----ESCAICMADYEEGDKLAVLPCLHAFHTECIRKWLLLRNLCP 869
            D+D   +E LL L+   G      +   GLSE  +   L+  + S A ++    E C IC  DY EG+ L  L C H FH++CI++WL+ +NLCP
Sbjct:   37 DVDNMSYEELLALEERIG------NVSTGLSEETIRNRLKQKKYSVAVVSQLEAEPCCICQEDYNEGEDLGTLECGHDFHSDCIKQWLMHKNLCP 125          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig319.8590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB19_ECTSI1.190e-4454.23Similar to RING finger protein 122 n=1 Tax=Ectocar... [more]
A0A6H5L8B3_9PHAE6.090e-3563.33RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A2U1LV71_ARTAN2.090e-1241.18Zinc finger, RING/FYVE/PHD-type n=1 Tax=Artemisia ... [more]
UPI001BF9D1CC1.420e-940.21Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
UPI001929A8172.910e-936.94probable E3 ubiquitin-protein ligase HIP1 isoform ... [more]
D7SVW0_VITVI6.130e-938.14RING-type domain-containing protein n=1 Tax=Vitis ... [more]
A0A2I0VU68_9ASPA7.100e-936.08E3 ubiquitin ligase BIG BROTHER-related n=1 Tax=De... [more]
UPI001C7252F48.290e-938.95E3 ubiquitin-protein ligase MBR2-like isoform X1 n... [more]
A0A835C0D1_9POAL9.840e-958.54RING-type domain-containing protein n=1 Tax=Digita... [more]
UPI001E8207031.160e-837.89Uncharacterized protein n=1 Tax=Ziziphus jujuba va... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 684..704
NoneNo IPR availablePANTHERPTHR22937RING FINGER CONTAINING PROTEINcoord: 250..869
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 830..877
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 831..871
e-value: 2.3E-6
score: 37.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 830..870
e-value: 1.0E-10
score: 41.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 831..871
score: 11.339
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 820..889
e-value: 1.4E-15
score: 58.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig319contigH-paniculata_contig319:24006..33362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig319.8590.1mRNA_H-paniculata_contig319.8590.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig319 23672..34511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig319.8590.1 ID=prot_H-paniculata_contig319.8590.1|Name=mRNA_H-paniculata_contig319.8590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=896bp
MAKPLDEAISAVRGYLEQATEEATKATGLSTSDAIKTDVLLLAFYKATRH
LSKLRSSFALQAEMLPELSTTKDRWAMGGMEECQKAQSALARAEKIAEEK
YHKSMAQLSRTDLTGTNYQGPALKLMESYNQATAAARTALRALDAAVEPS
VDGGRRRASATTAAAAAGRTVSDERCHYLPSNPAEPQQAGLGRKALPRTR
AERVSAKWSAGMNGAGAGGGGGGGSGGGCGCVSHLGLAHRCNSEKTFRSS
QMSQVLQQARSRAGSGSRPGYTSVSLSGYGLHHQQAGVPTNEMGSSSSLL
SINDATASDGVNPVGFLSGSATPALLPAAPSFTRALNAAPPAATTLHPSS
PPRLPPTTPSSASTRPISSPGIASRTTKSTPPASAASTEVSSAKPTLGLL
SVAHGGEVWRRSMAVVAEERRAMSRAAAVTAAAAALPSSAAHATPADLLP
EATEARMMQRCGEQEERRNRKLSPEEQRAAIHWRLEAQHSRASSSVCRQW
LDAGSNARQDPASAATIVSAHGRAAGGRRFTRHTPPSAAYMDHHITNEDA
DSGAGVARWSGRQSSTGPTAGPVSETASEQQPVLDEAHAAAQAAHQEEVE
RATASDAKLAALLSATVSPPPFATVTTVPSRHCLYGETGLWARPEIAQEQ
RVDVIEVERQAWGLRGGDHDNGMQARDVGDLGALQDVNEDMATALRLAKQ
EEEEQAREDAQLALRLTEFEEAGREQRAERARRRAARRHARSVRRYAQSA
GLDPAVAAAAFAAEGSAVPEAVRALQFQDIDENDFETLLELDAGGGASGG
CCSGEKGLSEAVLEATLQPVEASGARLTESCAICMADYEEGDKLAVLPCL
HAFHTECIRKWLLLRNLCPADMQPVVHDSSQEISATVGARVGQSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD