prot_H-paniculata_contig319.8587.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig319.8587.1
Unique Nameprot_H-paniculata_contig319.8587.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length636
Homology
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BLAST of mRNA_H-paniculata_contig319.8587.1 vs. uniprot
Match: A0A6H5L4F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4F4_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 7.480e-21
Identity = 170/448 (37.95%), Postives = 213/448 (47.54%), Query Frame = 0 
Query:   97 LDLHVAVAAGDLLAVEAYIARHAAEGSARTRPASVLSAMLA--VSGV----------EGAAAAAGCGALEMRDSRGRTPLHMACEHGRSEAVRALLAGGANANATXXXXXXXXXXXXXXXXXXXXXXXLFERRRRPGEGEGGGSAHGDATFMLPEAGADVDVNAPSRRGGYSPLHLACLSPSPSPAAARKRGDTGKECSSSLPSASSQLVMLLLEKGADVEAIDRWGCSPLHRACLEGHLEAARAVLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSERPGQRFPDNVSKERREAVQNVL-----------AVELDLDVALP---AWARTRSADTVQSGAGNTSMPSGRYVPPAARRSLSMVAL-------------DSKGGGSGPSAGEETSRVPAAQPWRRKSITTVRAC-DRGPGVDGGVDSTGNGNGS 504
            L +H  VAAGD+ +VEAYIAR+A +     RP++  +  L    SG+          +  A + G   LE+ + RGRTPLH AC  G    V  LLA GA+ANA                        L   R      +GGG A   +  +   A  + DV+ P+RRG Y  +HLAC +                         S+ +V LL  +GADV A D+WG SPL                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +RPGQ F ++V+ ERR+ +  +L           +V L  +   P   AW+R R+  T     G    PS RYVPPAA                      DS GGG   +  E  S + A QPWRRK+ T +    DRGP VD  +D     +GS
Sbjct:   75 LAIHAVVAAGDVSSVEAYIARNADKILKFRRPSATATTTLVPPTSGIAALLVDPAAPKSDADSGGVSPLEVVNLRGRTPLHTACIGGHIRVVELLLAAGADANA-------FDNAGFSPLHRCAQSSDLHSARALLDRNKGGGGASPTSGDVSVVAFVNSDVDVPTRRGDYRAIHLACYA------------------------GSADMVNLLARRGADVSAGDKWGASPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIMQRPGQSFDNDVTSERRQVIAALLKESEKSRSTTSSVGLVGNTPCPGAGAWSRARN--TADPRQGKERSPS-RYVPPAAXXXXXXXXXXXXXXXXXXXXPTDSAGGGYRDTP-ELKSTISAVQPWRRKTSTWMGLSEDRGPDVD--IDGVVRSDGS 485
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BLAST of mRNA_H-paniculata_contig319.8587.1 vs. uniprot
Match: D8LB16_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB16_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.840e-18
Identity = 168/457 (36.76%), Postives = 210/457 (45.95%), Query Frame = 0 
Query:   97 LDLHVAVAAGDLLAVEAYIARHAAEGSARTRPASVLSAMLA--VSGV----------EGAAAAAGCGALEMRDSRGRTPLHMACEHGRSEAVRALLAGGANANATXXXXXXXXXXXXXXXXXXXXXXXLFERRRRPGEGEGGGSAHGDATFMLPEAGADVDVNAPSRRGGYSPLHLACLSPSPSPAAARKRGDTGKECSSSLPSASSQLVMLLLEKGADVEAIDRWGCSPLHRACLEGHLEAARAVLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSERPGQRFPDNVSKERREAVQNVL--------------AVELDLDVALPAWARTRS-ADTVQSGAGNTSMPSGRYVPPAARRSLSMVALDSKGGGSG--------------------PSAGEETSRVPAAQPWRRKSIT-TVRACDRGPGVDGGVDSTGNGNGSS 505
            L +H AVAAGD+ +VEAYIAR+A +     RP++  +  L    SG+          +  A + G   LE+ + RGRTPLH AC  G    V  LLA GA+ANA                        L +R +  G   G   A GDA+ +   A A+ DV+ P+RRG Y  +HLAC +                         S+ +V LL  +GADV A D+WG SPL                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +RPGQ F ++V  ERR+ +  +L              AV         AW+R R+  D +Q   G    PS RY+PPA                                      P+    TS V   QPWRRK+ T T  + DRGP VD  +D  G  +G S
Sbjct:   57 LAIHAAVAAGDVSSVEAYIARNADKILKFRRPSATATTALVPPTSGIAALLVDPAAPKSDADSGGVSPLEVVNLRGRTPLHTACVGGHIRVVEVLLAAGADANA-FDNAGFSPLHRCAQSSDLHSARALLDRNKGSGGRGGTSPAAGDASAV---ACANSDVDVPTRRGDYRAIHLACYA------------------------GSADMVSLLARRGADVSAGDKWGASPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDDILQRPGQSFDNDVPSERRQVIAALLKESEKARSTSNGIGAVGNTPWPGAGAWSRARNNTDPIQ---GKERSPS-RYIPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRDTPALKTTTSAV---QPWRRKTSTWTGLSEDRGPDVD--IDGVGRSDGIS 476
[Close]
BLAST of mRNA_H-paniculata_contig319.8587.1 vs. uniprot
Match: A0A835ZE33_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE33_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.880e-5
Identity = 109/251 (43.43%), Postives = 136/251 (54.18%), Query Frame = 0 
Query:  153 LEMRDSRGRTPLHMACEHGRSEAVRALLAGGANANATXXXXXXXXXXXXXXXXXXXXXXXLFERRRRPGEGEGGGSAHGDATFMLPEAGADVDVNAPSRRGGYSPLHLACLSPSPSPAAARKRGDTGKECSSSLPS-ASSQLVMLLLEKGADVEAIDRWGCSPLHRACLEGH--LEAARAVLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSERPGQRFPDNVSKERREAVQNVL 400
            ++ R + G +PLH AC  G++ A   LLA GA+  A    XXXXXXXXXXXXXXXXXXXX     R           H  A      A   VDV+    +GG + LH ACL  S +     + GD G+  S+ L S  ++Q V LL+E GA+ EA+D W C+PL R  L G   + AA  +L  XXXXXXXXXXXXXXXXXXXXXX                        PGQ F D+ +KE+R+AV+  L
Sbjct:   18 IDARGAGGVSPLHAACARGQAVAAEMLLAAGADVCAVDGSXXXXXXXXXXXXXXXXXXXXXQAEVRLAVAAV---PQHRGALAAAAAADRGVDVSL-RMKGGLTALHCACLGGSNA-----QPGDVGEGPSAHLDSQGAAQCVDLLIEYGANKEALDLWQCTPLLRGSLGGPSAVPAALRLLARXXXXXXXXXXXXXXXXXXXXXXNVELVRALLLAGASAAVKSCSGRNPGQAFLDDATKEQRDAVRVAL 259
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig319.8587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L4F4_9PHAE7.480e-2137.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB16_ECTSI2.840e-1836.76Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A835ZE33_9STRA2.880e-543.43Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 293..307
score: 41.99
coord: 160..175
score: 42.02
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 343..372
e-value: 0.0012
score: 28.1
coord: 253..306
e-value: 1.1
score: 18.2
coord: 159..188
e-value: 6.5E-6
score: 35.6
coord: 192..222
e-value: 220.0
score: 9.9
coord: 310..339
e-value: 1.5E-4
score: 31.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 159..191
score: 14.933
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 310..342
score: 13.33
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 346..375
score: 11.461
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 88..274
e-value: 3.6E-24
score: 87.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 283..397
e-value: 1.3E-29
score: 104.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 99..380
NoneNo IPR availablePFAMPF13637Ank_4coord: 160..213
e-value: 9.0E-12
score: 45.3
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 289..418
coord: 94..262
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 292..374
e-value: 1.5E-12
score: 47.9
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 159..375
score: 39.284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig319contigH-paniculata_contig319:4473..10976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig319.8587.1mRNA_H-paniculata_contig319.8587.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig319 3409..11119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig319.8587.1 ID=prot_H-paniculata_contig319.8587.1|Name=mRNA_H-paniculata_contig319.8587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=636bp
MTLIRSEATGHGVVADDDVKQPAWSDTTDGDYGLPLEESTIHKKIPVTKV
SRTIATTCVVITTGPSGAAAAPNAMSDDGGVGGPRSWRPANGTDAPLDLH
VAVAAGDLLAVEAYIARHAAEGSARTRPASVLSAMLAVSGVEGAAAAAGC
GALEMRDSRGRTPLHMACEHGRSEAVRALLAGGANANATDRNGFQPLHKC
AQAGSLDSARALLFERRRRPGEGEGGGSAHGDATFMLPEAGADVDVNAPS
RRGGYSPLHLACLSPSPSPAAARKRGDTGKECSSSLPSASSQLVMLLLEK
GADVEAIDRWGCSPLHRACLEGHLEAARAVLNAGADVNAKDDWKCTPLHR
ACSNGDADLAALLIKHGASLLARDDQSERPGQRFPDNVSKERREAVQNVL
AVELDLDVALPAWARTRSADTVQSGAGNTSMPSGRYVPPAARRSLSMVAL
DSKGGGSGPSAGEETSRVPAAQPWRRKSITTVRACDRGPGVDGGVDSTGN
GNGSSWPKQQPWRRASIAVAEYSGERGPDVGDDGRAAETTCGVGGLGGGG
GAGGGIEETAQEHEVKVGMGARAGPESEGAGAIAGVGQGEPCADGSGLAE
LAADELSSIVGNCGGELGLAGSLYNDVFPPGDDWG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom