prot_H-paniculata_contig11328.857.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11328.857.1
Unique Nameprot_H-paniculata_contig11328.857.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length895
Homology
BLAST of mRNA_H-paniculata_contig11328.857.1 vs. uniprot
Match: A0A6H5JIT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIT4_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 3.200e-56
Identity = 291/979 (29.72%), Postives = 364/979 (37.18%), Query Frame = 0
Query:   17 LGRQEAGMEGSDIPAGLRPLSQRFGETLSLAVSNANLSAVYAAELGGLMTSLGLGPEDDHLVGAVATVAG-------------RRLCSSNVNPVTG-----------------LVCDMSSPRRRSS----------------------------------------------RKKYRPDLVEAAIGEAFENSISRRAGCSGGVSREGGEIEPRAAGSQRFAGGHRAALMDRLLSAILSTENLSDFLSESGRSSTGLRESDHAPPAFRNQFDALGGSEDEEHEQDEKYGSNGSVLQASADGPNRPSTGKMVTRLKEQKIANSTAALKNTTVIADVDSHTLGVEGPASKEDQSHRISEKDSILFFSSTVPSCSQPETDSPQQL-QTTHRQGTTEKGRDRVQEKEPDRENIAAGRDTVLRLYGAALLRFRVSVFLFCCVPG---------------SADGGVDEQGPRELTMRRQRVMCTENLHAVALHLGS-DAEWGSRVDTRSTGMTSSSPAGIGRQSKELPERSEGAEGSGSAGLCAGPGVCVGTISPSNWLRIAVGRASLFQGHSSL------------FSTRVAALLLSRSGERAGGSTLHREEFSLLSGGRSGEGGQEAAIVSGDDRETTQNSIMFPRGPA--STSAATAEAHFCLDSWPAKDFPKANEKAAQMFAPLSLTRRLPSDKTPIKRSASDHSDNHDGGEENNVFYFDDVPYDRENDIDDLERPPRRSSRKRKRAEQPDR---ANDRLDSSSSSPATVVPLHYAGLVGSLPREKRRLLVRLGHHGYVKVLENLLDRFVRCP-----------------GCPITATAVTNDSGPEPRQQQACAKSRSDRLLDALANSAGASDTKTSDTE----KCACQSAENDCHHRQGVKGALEAADRPPGKNGAGQDLWDALTTGTPHPALLGLIEPSNLARTEPDRLVLPIPNPFYRRVLHALCLVHGLCSQGGEARA 864
            +G + A   GS +PA LRPLS R      LAVSNANL  VY A+L GLM S+GL  ED HLVG      G             +RLC S+     G                 +V    SP+++ +                                              R K  PD+VEAAIGEAFE S+ R  G   G +       P   G +RFAG HRA L+D LL + LST+    FLS    S  G         A R +F    G E                     +GP     G     +      NS  AL +++  +  D    G      +ED   R+ E+ S L                   +  +T  +GT+ +            E  AAGR  VLRLYG+AL++ RVSVFLFC                   S DG  D+QGP ELT+RRQ VM  ENL AVA HL S   E G           S  P                        + +G           +W++I VGRA+L  G S+             FSTRVAALLLSRSGER                                             GP    T+ + AE  F  D WP +D P+A+E+ A++F       R           A   S N  G                    D     P                           S      P  YA L+G LPR+ R LL RLGHHGYVKVLE++L  F+R                   G P +++A+    G       A A         A  N+A A ++   D +    + A  SA  D  H        +  D  P  +    D W AL  G PHP L GL+EP  LA     RLVLP+PNPFYRRVLHALC VHGL S+GGE  A
Sbjct:   78 VGGKGAADGGSAVPASLRPLSWRLDFATRLAVSNANLRVVYEAQLVGLMRSIGL-QEDQHLVGLSGAAGGGGCASGVGEGKMRKRLCLSSPYSTRGSXXXXXXXXXKSLSRADVVASAQSPKKKKANEPPGKRDGHARCHSSYLFFRPGADDPALAASCSSPLSGAAKNVNRRDKRMPDMVEAAIGEAFEASLGRTFGGGAGGAGSSSSHPP---GPRRFAGAHRARLVDGLLCSALSTDL---FLSGLDGSRVG---------AVRERF----GEE--------------------VEGPYARDDG----FVSSSGFVNSFGALDSSSGSSSEDEEETGGMDEG-REDLGGRLGEEGSSLSEDLAAXXXXXXXXXXXXSIADSTVPEGTSTE------------ELTAAGRQGVLRLYGSALIKLRVSVFLFCSAXXXXXXXXXXXXXXXEKSIDGN-DKQGPSELTLRRQGVMSRENLDAVAAHLLSLRTETGGGXXXXXXXXXS--PVXXXXXXXXXXXXXXXXXXXXXEAVDSGRRA-------RDWMKIEVGRAALCAGGSNAAATATGAGRNVPFSTRVAALLLSRSGERGXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXGEEGPRVIRTTPSVAEIEFGRDPWPEEDLPRASEQVARIFLGQGAGDR-----------AGAASSNRGGXXXXXXXXXXXXXXGIVASGDGGTNRPXXXXXXXXXXXXXXXXXXGXXXXXXGGSGGDGQPPPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNGSASAEAPAXXXXXXXGDPASSSALETKIG---TTDTAGAGGSETAARPAPDNAAAADESAPPDADSILTEIAGSSAPGDDLHDSSSPPPPQLPDLDPDHDPGRSDPWRALQAGAPHPCLSGLVEPPELATAVGTRLVLPMPNPFYRRVLHALCRVHGLRSRGGETLA 968          
BLAST of mRNA_H-paniculata_contig11328.857.1 vs. uniprot
Match: D8LKV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV8_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.180e-25
Identity = 83/211 (39.34%), Postives = 103/211 (48.82%), Query Frame = 0
Query:  675 PLHYAGLVGSLPREKRRLLVRLGHHGYVKVLENLLDRFVR-----------------CPGCPITATAVTNDSGPEPRQQQACAKSRSDRLLDALANSAGASDTKTSDTEKCACQ----SAENDCHHRQGVKGALEAADRPPGKNGAGQDLWDALTTGTPHPALLGLIEPSNLARTEPDRLVLPIPNPFYRRVLHALCLVHGLCSQGGEARA 864
            P  YA L+G LPR+ R LL RLGHHGYVKVLE++L  F+R                   G P +++A+  + G       A A         A  N+  A ++   D +    +    SA  D  H        +  D  P       D W AL  G PHP L GL++P  LA     RLVLP+PNPFYRRVLHALC VHGL S+GGE  A
Sbjct:  519 PPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNGSASLEAPAAAAPAAAGDPASSSALETNIG---TTDTAGADGCETAARPAPDNATAADESAPPDADSILTENPGSSARGDDLHESSWPPPPQLPDLVPDHGPGRSDPWRALQAGAPHPCLSGLVDPPGLATAGGTRLVLPMPNPFYRRVLHALCRVHGLRSRGGETLA 726          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11328.857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIT4_9PHAE3.200e-5629.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKV8_ECTSI2.180e-2539.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11328contigH-paniculata_contig11328:2857..6215 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11328.857.1mRNA_H-paniculata_contig11328.857.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11328 2857..6232 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11328.857.1 ID=prot_H-paniculata_contig11328.857.1|Name=mRNA_H-paniculata_contig11328.857.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=895bp
MQEVVARLMAREALAALGRQEAGMEGSDIPAGLRPLSQRFGETLSLAVSN
ANLSAVYAAELGGLMTSLGLGPEDDHLVGAVATVAGRRLCSSNVNPVTGL
VCDMSSPRRRSSRKKYRPDLVEAAIGEAFENSISRRAGCSGGVSREGGEI
EPRAAGSQRFAGGHRAALMDRLLSAILSTENLSDFLSESGRSSTGLRESD
HAPPAFRNQFDALGGSEDEEHEQDEKYGSNGSVLQASADGPNRPSTGKMV
TRLKEQKIANSTAALKNTTVIADVDSHTLGVEGPASKEDQSHRISEKDSI
LFFSSTVPSCSQPETDSPQQLQTTHRQGTTEKGRDRVQEKEPDRENIAAG
RDTVLRLYGAALLRFRVSVFLFCCVPGSADGGVDEQGPRELTMRRQRVMC
TENLHAVALHLGSDAEWGSRVDTRSTGMTSSSPAGIGRQSKELPERSEGA
EGSGSAGLCAGPGVCVGTISPSNWLRIAVGRASLFQGHSSLFSTRVAALL
LSRSGERAGGSTLHREEFSLLSGGRSGEGGQEAAIVSGDDRETTQNSIMF
PRGPASTSAATAEAHFCLDSWPAKDFPKANEKAAQMFAPLSLTRRLPSDK
TPIKRSASDHSDNHDGGEENNVFYFDDVPYDRENDIDDLERPPRRSSRKR
KRAEQPDRANDRLDSSSSSPATVVPLHYAGLVGSLPREKRRLLVRLGHHG
YVKVLENLLDRFVRCPGCPITATAVTNDSGPEPRQQQACAKSRSDRLLDA
LANSAGASDTKTSDTEKCACQSAENDCHHRQGVKGALEAADRPPGKNGAG
QDLWDALTTGTPHPALLGLIEPSNLARTEPDRLVLPIPNPFYRRVLHALC
LVHGLCSQGGEARATHGADMQVGAEARYRTVEIMRRTSQGRRGIG
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