mRNA_H-paniculata_contig31771.8555.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE) HSP 1 Score: 307 bits (787), Expect = 3.000e-94 Identity = 171/434 (39.40%), Postives = 250/434 (57.60%), Query Frame = 1
Query: 1 WLETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSG-KVLQQTADDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLVHISSSLQRITPTSSTEADLVTLATCAKQGICLSNLLMELGWTQLSKVKVLFDNKGLL 1299
W KE+ NL H V L+P SVP +GT +VFK D RFKARLVV G Q+ G D + APVCR+ S ++ IG +W LD AFLN VY + APG + + A+G+P V L RS+YGL QS +WN T+D+ L LG+ T SD CVY S ++LT++VDDILITG + L+ + + +F +TD+G V ILGI+V R+ GTL +SQ YV ++L+ FGM+EANP +P G ++ D L K Y+++ GS+++ QCTRFD+ ++ ++ + +Q NM A K +LRYLR P LPI Y++ F+L ++D+S+G +STTG + FLA GL+ + Q +T S+ EA++ L+ A++ + +SN + EL + V + D+ G L
Sbjct: 201 WKGACSKEMYNLRKHNVYILVPLSSVPEGEKILGTKFVFKKTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGAL 634
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE) HSP 1 Score: 311 bits (796), Expect = 3.970e-94 Identity = 171/434 (39.40%), Postives = 252/434 (58.06%), Query Frame = 1
Query: 1 WLETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSG-KVLQQTADDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLVHISSSLQRITPTSSTEADLVTLATCAKQGICLSNLLMELGWTQLSKVKVLFDNKGLL 1299
W KE++NL H V +L+P SVP +GT +VFK K D RFKARLVV G Q+ G D + APVCR+ S ++ IG +W LD AFLN VY + APG + + A+G+P V L RS+YGL QS +WN T+D+ L G+ T SD CVY S ++LT++VDDILITG + L+ + + +F +TD+G V ILGI+V R+ GTL +SQ YV ++L+ FGM+EANP +P G ++ D L K Y+++ GS+++ QCTRFD+ ++ ++ + +Q NM A K +LRYLR P LPI Y++ F+L ++D+S+G +STTG + FLA GL+ + Q +T S+ EA++ L+ A++ + +SN + EL + V + D+ G L
Sbjct: 357 WKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGAL 790
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE) HSP 1 Score: 296 bits (759), Expect = 2.020e-92 Identity = 166/426 (38.97%), Postives = 247/426 (57.98%), Query Frame = 1
Query: 25 LNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSG-KVLQQTADDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLVHISSSLQRITPTSSTEADLVTLATCAKQGICLSNLLMELGWTQLSKVKVLFDNKGLL 1299
++NL H V +L+P SVP +GT +VFK K D RFKARLVV G Q+ G D + APVCR+ S ++ IG +W LD AFLN VY + APG + + A+G+P V L RS+YGL QS +WN T+D+ L G+ T SD CVY S ++LT++VDDILITG + L+ + + +F +TD+G V ILGI+V R+ GTL +SQ YV + L+ FGM+EANP + G ++ D L K Y+++ GS+++ QCT+FD+ ++ ++ + +Q NM A K +LRYLR P LPI Y++ F+L ++D+S+G +STTG + FLA GL+ + Q +T S+ EA++ L+ A++ + +SN + EL + V + D+ G L
Sbjct: 1 MDNLRKHNVYNLVPLSSVPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGAL 426
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE) HSP 1 Score: 292 bits (747), Expect = 6.130e-90 Identity = 167/434 (38.48%), Postives = 248/434 (57.14%), Query Frame = 1
Query: 1 WLETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSG-KVLQQTADDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLVHISSSLQRITPTSSTEADLVTLATCAKQGICLSNLLMELGWTQLSKVKVLFDNKGLL 1299
W KE++NL H V +L+P SVP +GT +VFK K D RFKA LVV G Q+ G D S+ APVCR+ S ++ IG +W LD VAFLN VY + APG + + A+G+P V L RS+YGL QS +WN T+++ L+ G+ T D CVY S ++LT++VDDILITG + L + + + +F +TD+G V ILGI+V R+ GTL +SQ YV ++L+ FGM+EANP + G ++ D L K Y+++ S+++ QCTRFD+ ++ ++ + +Q N+ A K +LRYLR P LPI Y++ F L +D+S+G +STTG + FLA GL+ + Q +T S+ EA++ L+ A++ I +SN + E + V + D+ G L
Sbjct: 94 WKGECIKEMDNLRKHNVYNLVPLSSVPKGEEILGTKFVFKKKLDGRFKAHLVVGGHRQEPGQDYGSSYAPVCRIGSIRMTCTIGCHNNWPIYQLDVVVAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLNESLKVFGWKRTQYDPCVYMYTSGNIIVILTVYVDDILITGGDQQL-VDQKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQFWLAASTDSSFGANLDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSFSAREAIYISNFMTEFNFKTFGWVPINSDSTGAL 526
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE) HSP 1 Score: 283 bits (723), Expect = 1.630e-84 Identity = 160/434 (36.87%), Postives = 237/434 (54.61%), Query Frame = 1
Query: 1 WLETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSGKVLQ-QTADDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLVHISSSLQRITPTSSTEADLVTLATCAKQGICLSNLLMELGWTQLSKVKVLFDNKGLL 1299
W + E+ NL H+V + VP T +VFK+K D RFKARLV G Q+ G APV RL S ++L I W LD AFLN VY + APG DP +G+ V L +S+YGL QS ++WN I+ L G+ T SD CVY S +L ++VDDILITG ++ ++ + + M F +TD+G V ++GIEV R+ GTL +SQ Y IL+ +GME+ANP +P G L + D L + ++++AI GSL++ QCTR+D+ +++ R +Q +M A K +LRYLR PDLPI Y+K F+L ++D+S+G +STTG + FL GL+ + Q + ++ EA+L L+ A++ + +SN + E+G+ V + D+ G L
Sbjct: 234 WKSAIDTEMGNLAKHKVFKKVRISLVPKDEDIFDTRFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGAL 667
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5K7T8_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T8_9PHAE) HSP 1 Score: 284 bits (727), Expect = 2.300e-84 Identity = 158/418 (37.80%), Postives = 240/418 (57.42%), Query Frame = 1
Query: 1 WLETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSG-KVLQQTADDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLVHISSSLQRITPTSSTEADLVTLATCAKQGICLSNLLMELGW 1251
W KE++NL H V +L+P SVP +GT + FK D RFKARLVV G Q+ G D + APVCR+ S ++ IG +W LD AFLN VY + APG + + A+G+P + L RS+YGL Q +W T+D+ L G+ T SD CVY S ++LT++VDDILITG + L+ + + +F +TD+G V ILGI+V R+ GTL +SQ YV ++L+ FGM+EANP +P G ++ D L K Y+++ GS+++ QCTRFD+ ++ ++ + +Q NM A K +LRY R P LPI ++ +F+L+ + +S+G +STTG + FLA GL+ + Q ++ S+ EA++ L+ A++ + +SN + EL +
Sbjct: 400 WKGACSKEMDNLRKHNVYNLVPLSSVPKGEKILGTKFAFKRTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNYATGEPMMYELERSLYGLSQYPALWKDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYRRGNPVLPIVSKRGHFRLVALTGSSFGANPGNGRSTTGYLFFLAGGLISYGAKTQTLSAHSTVEAEIQALSYSAREAVYISNFMTELNF 817
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5KS50_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS50_9PHAE) HSP 1 Score: 278 bits (711), Expect = 2.790e-83 Identity = 153/377 (40.58%), Postives = 218/377 (57.82%), Query Frame = 1
Query: 1 WLETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYT-KCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSGKVLQQTADDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLV 1128
W KE++NL H V +L+P SVP +GT +VF K D RFKARLVV G Q G D + APVCR+ S ++ IG +W LD AFLN VY + APG + + A+G+P V L RS+YGL QS +WN T+D+ L G+ T SD CVY S + ++LT+ VDDILITG + L+ + + +F +TD+G V ILGI+V R+ GTL +SQ V ++L+ FGM+EANP + G + Q Y+++ GS+++ QCTRFD+ ++ P ++ + +Q NM A K +LRYLR P LPI Y++ F+L ++D+S+G +STTG +SFLA GL+
Sbjct: 300 WKGACSKEMDNLRKHNVYNLVPLSSVPKGEQILGTKFVFTKKLDGRFKARLVVGGHRQAPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVCLTSGNTIVILTVCVDDILITGGDQQLVDQPKKELTNRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHNVNTLLERFGMQEANPVSTSGYGAEISTNQPQDQFLGPMVNFYQSMTGSILYVAQCTRFDLSYAALPLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIAYKRGQFRLAAFTDSSFGANPDNGRSTTGYLSFLAGGLI 676
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 285 bits (729), Expect = 7.190e-82 Identity = 164/435 (37.70%), Postives = 244/435 (56.09%), Query Frame = 1
Query: 1 WLETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSGKVLQQTA-DDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLVHISSSLQRITPTSSTEADLVTLATCAKQGICLSNLLMELGW-TQLSKVKVLFDNKGLL 1299
W +E+ +L D +V L+P +VPP I + WVFK K D FK R+V QGW Q G+DC ST APVCR++S +++ I + +D AFL ++E V+ +Q PGF + D G VM L +S+YGL QS W TID L +GF SD CVY + I LTL+VDD+L+ G + V+ K+F +TDLG SL+LG+E+ R++ + TL +SQ Y SIL+ FG+ + P +P G + +DT L E+ T++Y+ IVGSL++ Q R+DI ++ AR M K S+ +M+A K LRYL D I Y+K F+L +SD+++ KST+ ++ LA+ + S LQ +T S+ EA+LV A + + SN++ ELG+ + +++ V DN L
Sbjct: 1166 WNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGD-MVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATL 1599
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 283 bits (723), Expect = 1.720e-81 Identity = 143/361 (39.61%), Postives = 221/361 (61.22%), Query Frame = 1
Query: 1 WLETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITGPSETLLIGVRNDFMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSGKVLQQTADDT-QLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETR 1080
W + KE+ +L DH VADL+P S+PP IG+ W++K+K KARL+VQGW Q+HGIDC T APV R SQ +L+ I A R + +D AFL ++E VY +QA G+ + D +G P VM L++S+YGL+QS + K ++ +GFT +SD CVY + +Y +L ++VDD + G + +++ ++ KF +TD G L+LG+E++++ G + +SQHKYV++IL + M + PA +P SG ++Q ++ L E+ K Y+ IVGSL+F T TR++I +++ R MNK + +M+ KR+LRYLR PD+P+K+R+ + L Y DAS+ R
Sbjct: 905 WKAAMDKEMKSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLYGLKQSPRNFGNAFAKGIKEIGFTALLSDPCVYVYGAGPTYAILCVYVDDCTLAGKTPSVVQDLKKQLSDKFKMTDGGPAELLLGMEISQS--DGEIIVSQHKYVMNILDKYQMVDCKPAATPGSGPEIEQEPENAIYLSEEDKKLYQGIVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSER 1263
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 270 bits (691), Expect = 1.860e-80 Identity = 165/446 (37.00%), Postives = 245/446 (54.93%), Query Frame = 1
Query: 7 ETLRKELNNLDDHQVADLIPAHSVPPTHSSIGTCWVFKLKTDRRFKARLVVQGWAQQHGIDCDSTLAPVCRLESQQLLLVIGASRHWNNLVLDGQVAFLNGTLKESVYCKQAPGFAMMDPASGQPYVMSLRRSIYGLRQSLNVWNFTIDKELRSLGFTPTVSDSCVYTKCSR*SYIMLTLFVDDILITG----------PSETLLIGVRND---FMKKFAITDLGNVSLILGIEVTRNKTSGTLELSQHKYVLSILK*FGMEEANPAKSPTSGKVLQQTA-DDTQLHEQGTKQYRAIVGSLIFFTQCTRFDICHSMSPAARFMNKFSQDNMIAVKRILRYLRWQPDLPIKYRKNNFQLMGYSDASYGTEETRTKSTTGSMSFLASGLVHISSSLQRITPTSSTEADLVTLATCAKQGICLSNLLMELG-WTQLSKVKVLFDNKGLL 1299
+ L++E+ +L + +V L+P +VPP I + WVFK K D FK R+V QGW Q G+DC ST APVCR++S +++ I + +D AFL ++E V+ +Q PGF + D G VM L +S+YGL QS W TID L +GF SD CVY + I LTL+VDD+L+ G S L G+ K+F +TDLG S LG+++ R++ + TL +SQ Y SIL+ FGM + P +P G + +DT L E+ T++Y+ IVGSL++ Q R+DI ++ AR M K S+ +M+A K LRYL D I Y+K F+L +SD+++ KST+ ++ LA+ + S LQ +T S+ EA+LV A K+ + SN++ ELG + +++ V DN L
Sbjct: 147 QPLKREMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGD-MVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATL 591 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31771.8555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31771.8555.1 >prot_H-paniculata_contig31771.8555.1 ID=prot_H-paniculata_contig31771.8555.1|Name=mRNA_H-paniculata_contig31771.8555.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp MEEANPAKSPTSGKVLQQTADDTQLHEQGTKQYRAIVGSLIFFTQCTRFDback to top mRNA from alignment at H-paniculata_contig31771:1222..2520+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31771.8555.1 ID=mRNA_H-paniculata_contig31771.8555.1|Name=mRNA_H-paniculata_contig31771.8555.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1299bp|location=Sequence derived from alignment at H-paniculata_contig31771:1222..2520+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31771:1222..2520+ >mRNA_H-paniculata_contig31771.8555.1 ID=mRNA_H-paniculata_contig31771.8555.1|Name=mRNA_H-paniculata_contig31771.8555.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig31771:1222..2520+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |