prot_H-paniculata_contig3177.8554.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3177.8554.1
Unique Nameprot_H-paniculata_contig3177.8554.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length136
Homology
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5JCZ9_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCZ9_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 5.260e-19
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 0
Query:   47 AVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA 135
            AV+   ++   AA  F +S TS+  R++      AR G  TVLT EEE A+ED+L+YA RN + +TR  L E VR+LCNDG  +PWDP KGPGK+
Sbjct:   17 AVRNGSMSRYAAAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYAGRNYIPLTRNDLKERVRRLCNDGRPIPWDPDKGPGKS 111          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5JTL4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL4_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 5.690e-19
Identity = 48/95 (50.53%), Postives = 62/95 (65.26%), Query Frame = 0
Query:   47 AVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA 135
            AV+   ++   AA  F +S TS+  R++      AR G  TVLT EEE A+ED+L+YA RN + +TR  L E VRQLCNDG  +PWDP KGPGK+
Sbjct:   17 AVRNGSMSRYAAAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYACRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKS 111          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5JLA4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.460e-17
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 0
Query:   47 AVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA 135
            AV+   ++   AA  F ++ TS+  R++      AR G  TVL  EEE A+ED+L+YA RN + +TR  L E VRQLCNDG  +PWDP KGPGK+
Sbjct:   17 AVRNGSMSRYAAAAAFGLTKTSLLRRLSGECDIDARVGHGTVLMKEEENALEDVLLYAGRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKS 111          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5JDZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ5_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.680e-16
Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   47 AVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA 135
            AV+   ++   AA  F +S TS+  R++      AR G  TVLT EEE A+ED+L+YA RN + +TR  L E VRQLCND   +PWDP KG GK+
Sbjct:   17 AVRNGSMSRYAAAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYAGRNYIPLTRNDLKERVRQLCNDDRPIPWDPDKGLGKS 111          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5JHD1_9PHAE (HTH psq-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD1_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.830e-16
Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   46 EAVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA 135
            EAV+   ++    A  + V+ TS++ R++      AR G  TV+TA EE A+ED+L+YA RN + +T   L E VRQLCNDG  +PW P  GPG++
Sbjct:   30 EAVRSGSMSRNATAAAYGVNKTSLSRRLSGECAMDARVGPGTVMTAVEEDALEDILLYAGRNYIPLTTADLTERVRQLCNDGRPIPWTPDNGPGRS 125          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 3.070e-16
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   46 EAVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA 135
            EAV+   ++   AA  + +S TS++ R++      AR G  TV+TA EE A+ED+L+YA RN + +T   L E VRQLCNDG  +PW P KGPG++
Sbjct:   30 EAVRSGSMSGNAAAAAYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRS 125          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 5.970e-16
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   46 EAVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA 135
            +AV+R  ++   AA  + VS  S++ R++      AR G  TV+TA EE A+ED+L+YA RN + +T   L E VRQLCNDG  +PW P KGPG++
Sbjct:  373 DAVRRGSMSRNAAAAAYGVSKMSLSRRLSGECAMDARVGPGTVMTAAEEDALEDVLLYAGRNYIPLTPADLTERVRQLCNDGRPIPWTPDKGPGRS 468          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.290e-15
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   46 EAVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA 135
            EAV+   +++R AA  + V+  S++ R+       A+ G  TVLT EEE+ +ED L+YA R+ +GI R  L E+VRQLCNDG  +PWD   GPG++
Sbjct:   16 EAVRSGAMSLRAAAQAYGVNKRSLSRRLTGDESMDAKVGPRTVLTVEEESFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRS 111          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5K271_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K271_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.550e-15
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
Query:   70 AIRIAARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWDPLKG 131
            A+ + A+ G  TVL+ EE+ ++ED+L+YA R+CL + R  L+E VRQLCNDG  +PWDP KG
Sbjct:   24 AVAMKAKVGPATVLSEEEDNSLEDVLLYAGRHCLAVGRLHLLETVRQLCNDGRPIPWDPEKG 85          
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Match: A0A6H5L3H0_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H0_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 5.480e-15
Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 0
Query:   47 AVKRKEVTIRIAALKFQVSPTSIAIRIA------ARPGSPTVLTAEEETAIEDLLVYARRNCLGITRPQLVENVRQLCNDGHKMPWD 127
            AV+   ++   AA  F +S TS+  R++      AR G  TVLT EEE A+ED+L+YA RN + +TR  L E VRQLCNDG  +PWD
Sbjct:   17 AVRNGSMSRYAAAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYAGRNYIPLTRNDLKERVRQLCNDGRPIPWD 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3177.8554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JCZ9_9PHAE5.260e-1949.47HTH CENPB-type domain-containing protein (Fragment... [more]
A0A6H5JTL4_9PHAE5.690e-1950.53HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JLA4_9PHAE1.460e-1748.42HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JDZ5_9PHAE2.680e-1648.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHD1_9PHAE2.830e-1643.75HTH psq-type domain-containing protein n=2 Tax=Ect... [more]
A0A6H5JYX7_9PHAE3.070e-1645.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W6_9PHAE5.970e-1645.83HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5L5E2_9PHAE1.290e-1544.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K271_9PHAE2.550e-1553.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3H0_9PHAE5.480e-1548.28HTH psq-type domain-containing protein (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3177contigH-paniculata_contig3177:5632..6039 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3177.8554.1mRNA_H-paniculata_contig3177.8554.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3177 5632..6150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3177.8554.1 ID=prot_H-paniculata_contig3177.8554.1|Name=mRNA_H-paniculata_contig3177.8554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp
LLSALTHELVTICLRSSTSRTLEACNWSPFYPCRASVWTRKRRNGEAVKR
KEVTIRIAALKFQVSPTSIAIRIAARPGSPTVLTAEEETAIEDLLVYARR
NCLGITRPQLVENVRQLCNDGHKMPWDPLKGPGKA*
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