mRNA_H-paniculata_contig31705.8543.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig31705.8543.1
Unique NamemRNA_H-paniculata_contig31705.8543.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 2.190e-77
Identity = 130/331 (39.27%), Postives = 197/331 (59.52%), Query Frame = -1
Query:    4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
            +P N++T   + AKF  ED   +  A A AIAASR     G    W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+N   G++ F       WRR       F PEFW L+ +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVAV+GG E + + A+  HQ  HW++  DC+N+F++    AI+ + A  +P L  ++A+CY E P + I+ MD+   R +    G+ Q  G+ P  FC  +  I  K R +++ LGV L AY++D+ L    +T E ++ I  LV EL  + +  N  K+ A+PP
Sbjct:   39 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPP 369          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.730e-75
Identity = 132/331 (39.88%), Postives = 200/331 (60.42%), Query Frame = -1
Query:    4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
            +P N++T   + AKF  ED   +  A A AIAASR     G    W+P+ E++P++L+ VVN +++ S AGNDG RFSHL+ I+NT  G++ F     S WRR       F PEFW L  +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVAV+GG E + + A+  HQ  HW++  DC+N+F++    AI+ + +  +P L  ++A+CY E P + I+ MD+ E R +   +G+ Q  G+ P  FC  +  I  K R +++ LGV L AY++D+ L   ++T E ++    LV EL  + +  N  K+ A+PP
Sbjct:  316 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPP 646          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.860e-75
Identity = 134/331 (40.48%), Postives = 208/331 (62.84%), Query Frame = -1
Query:    4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
            +P N++T   + AKF  ED+ A+  A A AIA S      G    W+P++E++P++LI V+N +++ S AGNDG RFSHL+ I NT  G++ F     S WRR       F PEFW L+ +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVAV+GG E + + A+  HQ  +W+I  DC+N+F++    AI+ + A  +P L  ++A+CY E P   +++MD+ E R +   +G+ Q  G+ P  F + +  I  K +++++PLGV   AY++D+ L + +LTEE ++A+  LV ELA + +  N AK+ A+PP
Sbjct:  487 SPGNDETWERLKAKFPLEDSAAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPP 817          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 1.180e-74
Identity = 128/324 (39.51%), Postives = 193/324 (59.57%), Query Frame = -1
Query:    4 LGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 954
            +GT  ++F  ED   +  A A AIAASR     G    W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+NT  G++ F     S WRR       F PEFW L+ +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVAV+GG E + + A+   Q  HW++  DC+N  ++    AI+ + A  +P L   +A+CY E P + I+ MD+ E R +   +G+ Q  G+ P  FC  +  I  K R +++ LGV L AY++D+ L    +T E ++ I  LV EL  + +  N  K+ A+PP
Sbjct:    1 MGTPESQFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGKSSALPP 323          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 1.580e-74
Identity = 133/331 (40.18%), Postives = 201/331 (60.73%), Query Frame = -1
Query:    4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
            +P N++T   + AKF  ED   +  A A AIAASR     G    W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+NT  G++ F     S WRR       F PEFW L+ +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVAV+GG E + + A+  HQ  HW++  DC+N+F++    AI+ + A  +P L  ++A+CY E P + I+ MD+ E R +   +G+ Q  G+ P  FC  +  I  K R +++ LGV L AY++D+ L    +T E ++ I  LV EL  + +  N  K+ A+PP
Sbjct:  317 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPP 647          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 1.240e-73
Identity = 131/331 (39.58%), Postives = 199/331 (60.12%), Query Frame = -1
Query:    4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
            +P N++T   + AKF  ED   +  A A A AASR     G    W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+NT  G++ F     S WRR       F PEFW L+ +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVAV+GG E + + A+  HQ  HW++  DC+N+F++    AI+ + A  +P L  ++A+CY E P + I+ MD+ E R +   +G+ Q  G+ P  FC  +  I  K R +++ LGV L AY++D+ L    +T E ++ I  LV EL  + +  N  K+ A+ P
Sbjct:  338 SPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHP 668          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 4.060e-64
Identity = 114/282 (40.43%), Postives = 171/282 (60.64%), Query Frame = -1
Query:  151 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLG 975
            +P N++T   + AKF +ED   +  A A AIAASR     G    W+P+ E++P +L+ V+N +++   AGNDG RFSHL+ I+NT  G++ F     S WRR       F PEFW L+  S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVAV+GG E + + A+  HQ  HW++  DC+N+F++    AI+ + A  +P L  ++A+CY E P + I+ MD+ E R +   +G+ Q  G+ P  FC  +  I  K R +++ LG
Sbjct:  324 SPGNDETWARLKAKFTREDPVQVEQANAEAIAASRTEEEEGSAPRWRPETEFDPRVLLQVINSRSSNFGAGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLG 605          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.700e-63
Identity = 111/273 (40.66%), Postives = 168/273 (61.54%), Query Frame = -1
Query:    4 VVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLV-LAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 798
            V+N +++ S AGNDG RFSHL+ I+NT  G++ F     S WRR       F PEFW L+ +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVAV+GG E + + A+  HQ  HW++  DC+N+F++    AI+ + A  +P L  ++A+CY E P + I+ MD+ E R +   +G+ Q  G+ P  FC  +  I  K R +++ LGV L AY++D++ L    +T E ++ I  LV EL  + +  N  K+ A+PP
Sbjct:    7 VINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPP 279          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.390e-62
Identity = 112/282 (39.72%), Postives = 170/282 (60.28%), Query Frame = -1
Query:  151 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLG 975
            +P N++T   + AKF  ED   +  A A AIAASR     G    W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+NT  G++ F     S WRR       F PEFW L+ +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVA +GG E + + A+  HQ  HW++  DC+N+F+     A + + A  +P L  ++A+CY E P + I+ MD+ E R +   +G+ Q  G+ P  FC  +  I  K R +++ +G
Sbjct:  325 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNMGKRTATMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHIG 606          
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 2.440e-62
Identity = 130/387 (33.59%), Postives = 197/387 (50.90%), Query Frame = -1
Query:    4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQC-ILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTN-------------------------------------------------------SFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
            +P N++T   + AKF  ED   +  A A AIAASR     G    W+P+ E++P++L+ V+N +++ S AGNDG  FSHL   I+NT  G++ F     S WRR       F PEFW L+ +S+L ALGEKCRP+C+  T RR +AAG VR ++ KLE++     Q+GVA +G  E + + A+  HQ  HW++  DC+N                                                       +F++    AI+ + A  +P L  ++A+CY E P + I+ MD+ E R +   +G+ Q  G+ P  FC  +  I  K R +++ LGV L AY++D+ L    +T E ++ I  LV EL  + +  N  K+ A+PP
Sbjct:  287 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPP 673          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR59_9PHAE2.190e-7739.27Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE1.730e-7539.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE2.860e-7540.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE1.180e-7439.51Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KMQ2_9PHAE1.580e-7440.18Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE1.240e-7339.58Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KA96_9PHAE4.060e-6440.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LL14_9PHAE2.700e-6340.66Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K195_9PHAE1.390e-6239.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJC0_9PHAE2.440e-6233.59Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31705contigH-paniculata_contig31705:1135..2373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1218
Cds size660
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31705.8543.1prot_H-paniculata_contig31705.8543.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig31705 1344..2024 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929976.7490668-UTR-H-paniculata_contig31705:1134..13431622929976.7490668-UTR-H-paniculata_contig31705:1134..1343Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31705 1135..1343 -
1691481094.6419098-UTR-H-paniculata_contig31705:1134..13431691481094.6419098-UTR-H-paniculata_contig31705:1134..1343Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31705 1135..1343 -
1622929976.840884-UTR-H-paniculata_contig31705:2024..23731622929976.840884-UTR-H-paniculata_contig31705:2024..2373Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31705 2025..2373 -
1691481094.6702394-UTR-H-paniculata_contig31705:2024..23731691481094.6702394-UTR-H-paniculata_contig31705:2024..2373Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig31705 2025..2373 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929976.8010354-CDS-H-paniculata_contig31705:1343..16851622929976.8010354-CDS-H-paniculata_contig31705:1343..1685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31705 1344..1685 -
1691481094.6515894-CDS-H-paniculata_contig31705:1343..16851691481094.6515894-CDS-H-paniculata_contig31705:1343..1685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31705 1344..1685 -
1622929976.821027-CDS-H-paniculata_contig31705:1706..20241622929976.821027-CDS-H-paniculata_contig31705:1706..2024Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31705 1707..2024 -
1691481094.6607385-CDS-H-paniculata_contig31705:1706..20241691481094.6607385-CDS-H-paniculata_contig31705:1706..2024Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig31705 1707..2024 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig31705.8543.1

>prot_H-paniculata_contig31705.8543.1 ID=prot_H-paniculata_contig31705.8543.1|Name=mRNA_H-paniculata_contig31705.8543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
MRIATSSKIAASITESKELVQSRAISQCYSWWCAFAPRPMGSAPPETATP
YCRSDRLTFSSFDLYGLTTPAAKLRRIVDLTQIGRHFSPSAVRLLSRNSS
QNSGVKRRQKDPKTGPKPFLPAKVFRMHCRWEKRWPSLPAADRAFFQFTT
TISISGLYSSSGFQAASPPPASEPRLAAMAAAFAAASAGASSWPNFALTV
PKVSSLAGAIHPTKPLSPR*
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mRNA from alignment at H-paniculata_contig31705:1135..2373-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig31705.8543.1 ID=mRNA_H-paniculata_contig31705.8543.1|Name=mRNA_H-paniculata_contig31705.8543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1239bp|location=Sequence derived from alignment at H-paniculata_contig31705:1135..2373- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATTGGGGGCACCGCCTTCGTCTTGGCGTTGTTCTTCTGTACTTCTATGC GTGCTAGCTCTTGCACGAGGAAACGGATCGCCCTTAATTTTTCTTCCGTC AGCTCTCCCATTGCCAGCACCAGATCTTCCAGGTAGGCCAATAGCTCCAC CCCCAGAGGCTCGAATTGTTCTCGGCACTTGCGGAAGATCGATCCCACGG GCATGCAGAAGAAGGCGGGTCTCAGCCCGCCGCACTGATGGATTCCCGTG TTCGAAGAAACTTTCCTGCATTCATCGGTGTCCATCTGGAAAATGATTTC TACCGGCTTCTCCCCATAGCATTTGGCTACGAAAGGTGTCAGTCCCGGGA TGCGGATTGCCACTTCTTCCAAGATCGCCGCGAGCATAACGGAGTCGAAG GAATTGGTACAGTCGAGGGCGATAAGCCAATGCTACAGTTGGTGGTGTGC TTTCGCGCCGAGGCCCATGGGCTCCGCGCCGCCTGAGACCGCTACCCCGT ACTGCCGCTCCGACAGGCTAACCTTCTCAAGTTTCGACCTGTATGGCCTG ACCACCCCAGCGGCCAAACTACGCCGCATCGTAGATCTCACGCAGATCGG GCGGCATTTCTCCCCGAGCGCCGTTAGGTTGCTTTCGAGGAACAGCTCCC AGAACTCCGGCGTGAAGGCGTCGGGTTGGTCCATGGAGCGCCGCCAGAAA GACCCGAAAACGGGGCCAAAACCTTTCTTACCCGCCAAGGTGTTCAGGAT GCACTGCAGATGGGAGAAACGGTGGCCATCGTTACCCGCCGCGGACAGGG CATTCTTCCAATTCACAACCACTATCAGCATTTCGGGATTATACTCGTCG TCTGGCTTCCAGGCGGCATCTCCGCCCCCGGCGAGTGAACCCCGGCTTGC CGCTATGGCCGCTGCTTTCGCCGCTGCCAGCGCGGGCGCATCCTCCTGGC CGAACTTCGCGCTGACTGTGCCCAAGGTATCCTCGTTGGCAGGCGCGATT CATCCGACAAAACCGCTCTCGCCGCGTTAGAGATCCCCCCTTTGTGCCTG CACGCAGCTGCCGCCATCCTGGATCTGTCCGCCGTAGACGTGCTCCCCGC CGTCGACCGGCGGCGGGTCGCCGCGGCGTCCGTGTACGCCATGAGCCACG AGAGCACGACGCTGATGTCCCCTCTCTTCACTGCGAGGAACCTGTCCCTC CTGGAGAATTGTCCGTCGGTAGATAGAAGCAGCGCCGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig31705:1135..2373-

>mRNA_H-paniculata_contig31705.8543.1 ID=mRNA_H-paniculata_contig31705.8543.1|Name=mRNA_H-paniculata_contig31705.8543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig31705:1135..2373- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGATTGCCACTTCTTCCAAGATCGCCGCGAGCATAACGGAGTCGAA
GGAATTGGTACAGTCGAGGGCGATAAGCCAATGCTACAGTTGGTGGTGTG
CTTTCGCGCCGAGGCCCATGGGCTCCGCGCCGCCTGAGACCGCTACCCCG
TACTGCCGCTCCGACAGGCTAACCTTCTCAAGTTTCGACCTGTATGGCCT
GACCACCCCAGCGGCCAAACTACGCCGCATCGTAGATCTCACGCAGATCG
GGCGGCATTTCTCCCCGAGCGCCGTTAGGTTGCTTTCGAGGAACAGCTCC
CAGAACTCCGGCGTGAAGATGCGGATTGCCACTTCTTCCAAGATCGCCGC
GAGCATAACGGAGTCGAAGGAATTGGTACAGTCGAGGGCGATAAGCCAAT
GCTACAGTTGGTGGTGTGCTTTCGCGCCGAGGCCCATGGGCTCCGCGCCG
CCTGAGACCGCTACCCCGTACTGCCGCTCCGACAGGCTAACCTTCTCAAG
TTTCGACCTGTATGGCCTGACCACCCCAGCGGCCAAACTACGCCGCATCG
TAGATCTCACGCAGATCGGGCGGCATTTCTCCCCGAGCGCCGTTAGGTTG
CTTTCGAGGAACAGCTCCCAGAACTCCGGCGTGAAGCGCCGCCAGAAAGA
CCCGAAAACGGGGCCAAAACCTTTCTTACCCGCCAAGGTGTTCAGGATGC
ACTGCAGATGGGAGAAACGGTGGCCATCGTTACCCGCCGCGGACAGGGCA
TTCTTCCAATTCACAACCACTATCAGCATTTCGGGATTATACTCGTCGTC
TGGCTTCCAGGCGGCATCTCCGCCCCCGGCGAGTGAACCCCGGCTTGCCG
CTATGGCCGCTGCTTTCGCCGCTGCCAGCGCGGGCGCATCCTCCTGGCCG
AACTTCGCGCTGACTGTGCCCAAGGTATCCTCGTTGGCAGGCGCGATTCA
TCCGACAAAACCGCTCTCGCCGCGTTAGCGCCGCCAGAAAGACCCGAAAA
CGGGGCCAAAACCTTTCTTACCCGCCAAGGTGTTCAGGATGCACTGCAGA
TGGGAGAAACGGTGGCCATCGTTACCCGCCGCGGACAGGGCATTCTTCCA
ATTCACAACCACTATCAGCATTTCGGGATTATACTCGTCGTCTGGCTTCC
AGGCGGCATCTCCGCCCCCGGCGAGTGAACCCCGGCTTGCCGCTATGGCC
GCTGCTTTCGCCGCTGCCAGCGCGGGCGCATCCTCCTGGCCGAACTTCGC
GCTGACTGTGCCCAAGGTATCCTCGTTGGCAGGCGCGATTCATCCGACAA
AACCGCTCTCGCCGCGTTAG
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