mRNA_H-paniculata_contig31705.8543.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE) HSP 1 Score: 255 bits (651), Expect = 2.190e-77 Identity = 130/331 (39.27%), Postives = 197/331 (59.52%), Query Frame = -1
Query: 4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
+P N++T + AKF ED + A A AIAASR G W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+N G++ F WRR F PEFW L+ +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVAV+GG E + + A+ HQ HW++ DC+N+F++ AI+ + A +P L ++A+CY E P + I+ MD+ R + G+ Q G+ P FC + I K R +++ LGV L AY++D+ L +T E ++ I LV EL + + N K+ A+PP
Sbjct: 39 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPP 369
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE) HSP 1 Score: 259 bits (661), Expect = 1.730e-75 Identity = 132/331 (39.88%), Postives = 200/331 (60.42%), Query Frame = -1
Query: 4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
+P N++T + AKF ED + A A AIAASR G W+P+ E++P++L+ VVN +++ S AGNDG RFSHL+ I+NT G++ F S WRR F PEFW L +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVAV+GG E + + A+ HQ HW++ DC+N+F++ AI+ + + +P L ++A+CY E P + I+ MD+ E R + +G+ Q G+ P FC + I K R +++ LGV L AY++D+ L ++T E ++ LV EL + + N K+ A+PP
Sbjct: 316 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPP 646
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 265 bits (677), Expect = 2.860e-75 Identity = 134/331 (40.48%), Postives = 208/331 (62.84%), Query Frame = -1
Query: 4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
+P N++T + AKF ED+ A+ A A AIA S G W+P++E++P++LI V+N +++ S AGNDG RFSHL+ I NT G++ F S WRR F PEFW L+ +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVAV+GG E + + A+ HQ +W+I DC+N+F++ AI+ + A +P L ++A+CY E P +++MD+ E R + +G+ Q G+ P F + + I K +++++PLGV AY++D+ L + +LTEE ++A+ LV ELA + + N AK+ A+PP
Sbjct: 487 SPGNDETWERLKAKFPLEDSAAVEQAVADAIAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDELAEVGIVVNRAKSSALPP 817
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.180e-74 Identity = 128/324 (39.51%), Postives = 193/324 (59.57%), Query Frame = -1
Query: 4 LGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 954
+GT ++F ED + A A AIAASR G W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+NT G++ F S WRR F PEFW L+ +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVAV+GG E + + A+ Q HW++ DC+N ++ AI+ + A +P L +A+CY E P + I+ MD+ E R + +G+ Q G+ P FC + I K R +++ LGV L AY++D+ L +T E ++ I LV EL + + N K+ A+PP
Sbjct: 1 MGTPESQFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGKSSALPP 323
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 262 bits (669), Expect = 1.580e-74 Identity = 133/331 (40.18%), Postives = 201/331 (60.73%), Query Frame = -1
Query: 4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
+P N++T + AKF ED + A A AIAASR G W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+NT G++ F S WRR F PEFW L+ +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVAV+GG E + + A+ HQ HW++ DC+N+F++ AI+ + A +P L ++A+CY E P + I+ MD+ E R + +G+ Q G+ P FC + I K R +++ LGV L AY++D+ L +T E ++ I LV EL + + N K+ A+PP
Sbjct: 317 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPP 647
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE) HSP 1 Score: 256 bits (653), Expect = 1.240e-73 Identity = 131/331 (39.58%), Postives = 199/331 (60.12%), Query Frame = -1
Query: 4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
+P N++T + AKF ED + A A A AASR G W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+NT G++ F S WRR F PEFW L+ +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVAV+GG E + + A+ HQ HW++ DC+N+F++ AI+ + A +P L ++A+CY E P + I+ MD+ E R + +G+ Q G+ P FC + I K R +++ LGV L AY++D+ L +T E ++ I LV EL + + N K+ A+ P
Sbjct: 338 SPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHP 668
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE) HSP 1 Score: 229 bits (584), Expect = 4.060e-64 Identity = 114/282 (40.43%), Postives = 171/282 (60.64%), Query Frame = -1
Query: 151 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLG 975
+P N++T + AKF +ED + A A AIAASR G W+P+ E++P +L+ V+N +++ AGNDG RFSHL+ I+NT G++ F S WRR F PEFW L+ S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVAV+GG E + + A+ HQ HW++ DC+N+F++ AI+ + A +P L ++A+CY E P + I+ MD+ E R + +G+ Q G+ P FC + I K R +++ LG
Sbjct: 324 SPGNDETWARLKAKFTREDPVQVEQANAEAIAASRTEEEEGSAPRWRPETEFDPRVLLQVINSRSSNFGAGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLG 605
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE) HSP 1 Score: 224 bits (571), Expect = 2.700e-63 Identity = 111/273 (40.66%), Postives = 168/273 (61.54%), Query Frame = -1
Query: 4 VVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLV-LAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 798
V+N +++ S AGNDG RFSHL+ I+NT G++ F S WRR F PEFW L+ +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVAV+GG E + + A+ HQ HW++ DC+N+F++ AI+ + A +P L ++A+CY E P + I+ MD+ E R + +G+ Q G+ P FC + I K R +++ LGV L AY++D++ L +T E ++ I LV EL + + N K+ A+PP
Sbjct: 7 VINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPP 279
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5K195_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K195_9PHAE) HSP 1 Score: 228 bits (580), Expect = 1.390e-62 Identity = 112/282 (39.72%), Postives = 170/282 (60.28%), Query Frame = -1
Query: 151 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQCILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTNSFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLG 975
+P N++T + AKF ED + A A AIAASR G W+P+ E++P++L+ V+N +++ S AGNDG RFSHL+ I+NT G++ F S WRR F PEFW L+ +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVA +GG E + + A+ HQ HW++ DC+N+F+ A + + A +P L ++A+CY E P + I+ MD+ E R + +G+ Q G+ P FC + I K R +++ +G
Sbjct: 325 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNMGKRTATMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHIG 606
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE) HSP 1 Score: 224 bits (570), Expect = 2.440e-62 Identity = 130/387 (33.59%), Postives = 197/387 (50.90%), Query Frame = -1
Query: 4 APANEDTLGTVSAKFGQEDAPALAAAKAAAIAASRGSLAGGGDAAWKPDDEYNPEMLIVVVNWKNALSAAGNDGHRFSHLQC-ILNTLAGKKGFGPVFGSFWRR-------FTPEFWELFLESNLTALGEKCRPICVRSTMRRSLAAGVVRPYRSKLEKVSLSERQYGVAVSGGAEPMGLGAKAHHQL*HWLIALDCTN-------------------------------------------------------SFDSVMLAAILEEVAIRIPGLTPFVAKCYGEKPVEIIFQMDTDECRKVSSNTGIHQCGGLRPAFFCMPVGSIFRKCREQFEPLGVELLAYLEDLVLAMGELTEEKLRAIRFLVQELARIEVQKNNAKTKAVPP 975
+P N++T + AKF ED + A A AIAASR G W+P+ E++P++L+ V+N +++ S AGNDG FSHL I+NT G++ F S WRR F PEFW L+ +S+L ALGEKCRP+C+ T RR +AAG VR ++ KLE++ Q+GVA +G E + + A+ HQ HW++ DC+N +F++ AI+ + A +P L ++A+CY E P + I+ MD+ E R + +G+ Q G+ P FC + I K R +++ LGV L AY++D+ L +T E ++ I LV EL + + N K+ A+PP
Sbjct: 287 SPGNDETWARLKAKFPHEDPVQVEQAIAEAIAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPP 673 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31705.8543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31705.8543.1 >prot_H-paniculata_contig31705.8543.1 ID=prot_H-paniculata_contig31705.8543.1|Name=mRNA_H-paniculata_contig31705.8543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp MRIATSSKIAASITESKELVQSRAISQCYSWWCAFAPRPMGSAPPETATPback to top mRNA from alignment at H-paniculata_contig31705:1135..2373- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31705.8543.1 ID=mRNA_H-paniculata_contig31705.8543.1|Name=mRNA_H-paniculata_contig31705.8543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1239bp|location=Sequence derived from alignment at H-paniculata_contig31705:1135..2373- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31705:1135..2373- >mRNA_H-paniculata_contig31705.8543.1 ID=mRNA_H-paniculata_contig31705.8543.1|Name=mRNA_H-paniculata_contig31705.8543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig31705:1135..2373- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |