mRNA_H-paniculata_contig31698.8541.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: A0A7M5V2B3_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V2B3_9CNID) HSP 1 Score: 135 bits (341), Expect = 2.230e-37 Identity = 65/149 (43.62%), Postives = 99/149 (66.44%), Query Frame = 3
Query: 126 KCIFRYLSTVPDLGITFGGKSNGHGL-EGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIGFGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKY 569
K + RYL D G+ + G +G L GF DADWA D+D RKST+GYVFK T+SW S++Q +V S+TEAEYVA +A +E ++LR L + + F + +K+FE+N+ A++L+K H RTKHI +++H +R+ + + V+ L+Y
Sbjct: 8 KRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSTTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPSKMFEDNQGAIDLAKNPTHHSRTKHIDIKFHHVRDAVAKKVIDLEY 156
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: H3G557_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G557_PHYRM) HSP 1 Score: 137 bits (345), Expect = 3.870e-37 Identity = 68/148 (45.95%), Postives = 97/148 (65.54%), Query Frame = 3
Query: 126 KCIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIGFGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKY 569
K I +YL T DLG+ F G + G L G+ DA+WA D+D R+STTGYVF N ISW S++Q V SSTEAEY+A A +E V+LR+LL +G C +T +F++N+ + L+K H RTKHI +++H +RE + + V+ L+Y
Sbjct: 76 KRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDSRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEY 222
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: A0A0J7K4U5_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K4U5_LASNI) HSP 1 Score: 136 bits (342), Expect = 1.760e-36 Identity = 69/146 (47.26%), Postives = 95/146 (65.07%), Query Frame = 3
Query: 108 SDFSTCKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIGFGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIR 545
S + K I +YL DLGI +G + + G+ DAD+A D++ R+STTGYVF G ++W S++Q LVT S+TEA+YVA A KE ++LR+LL IG GC E+T LF +N+SA+ L K H RTKHI +R+H I +W R
Sbjct: 84 SHWLAVKRIVKYLKGTLDLGIRYGSGKSLLQVVGYSDADYANDIETRRSTTGYVFMLVNGPVTWSSQRQKLVTLSTTEAKYVAAASAAKEMIWLRKLLSDIGHGCSEATVLFIDNQSAIRLVKNPEFHKRTKHIAIRFHIIPQWAR 229
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 137 bits (344), Expect = 4.610e-36 Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = 3
Query: 108 SDFSTCKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIGFGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKY 569
S + K I +YL T DLG+ F G + G L G+ DA+WA D+D R+STTGYVF N ISW S++Q V SSTEAEY+A A +E V+LR+LL +G C +T F++N+ + L+K H RTKHI +++H +RE + + V+ L+Y
Sbjct: 129 SHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEY 281
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM) HSP 1 Score: 132 bits (332), Expect = 8.860e-36 Identity = 67/150 (44.67%), Postives = 96/150 (64.00%), Query Frame = 3
Query: 126 KCIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIG-FGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYV 572
K +FRY+ GI F N GL+G+ DADWA D++ R+ST+GY F N G ISW S+KQ V SSTEAEY+A EA +E V+L+ L +G E+ K++E+N+ ++ L+K H RTKHI +R+H +RE + +G + L+YV
Sbjct: 1 KRVFRYIQGTKTHGIEFQASCN-DGLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYV 149
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901) HSP 1 Score: 133 bits (335), Expect = 1.130e-35 Identity = 67/156 (42.95%), Postives = 98/156 (62.82%), Query Frame = 3
Query: 105 MSDFSTCKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIGFGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKYV 572
++ ++ K I RYL D G+ + + +EG+VDAD+AED++ R+STTGYVF G ++W +++Q +VT S+TEAEYVA A KE ++LR LL + C +TK+F +N+S + L + S H RTKHI VR H IRE + G + K V
Sbjct: 27 VNHWNAVKRIIRYLLNTVDRGVLYESGGSNEEIEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCV 182
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: UPI001AAD17B1 (secreted RxLR effector protein 161-like n=2 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD17B1) HSP 1 Score: 132 bits (333), Expect = 3.520e-35 Identity = 71/155 (45.81%), Postives = 101/155 (65.16%), Query Frame = 3
Query: 111 DFSTCKCIFRYLSTVPD--LGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIGFGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKY 569
D++ K I RYL D L ++ GKS GL G+VDADWA D DRKST+G++F G ISW +RKQ VT SSTEAEYVA +AG+E ++LR+LL + +EST ++E+N+ + L++ + RTKHI VR+H +R+ +G + L+Y
Sbjct: 58 DWNAAKRIIRYLKGTIDFKLKLSSTGKS---GLTGYVDADWAGDPSDRKSTSGHLFLFKDGLISWTTRKQSTVTLSSTEAEYVAASQAGQEVIWLRQLLEDLDQNQKESTPIYEDNQGCIALAQTERINPRTKHIDVRYHFLRDLQEQGQMDLRY 209
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE) HSP 1 Score: 133 bits (334), Expect = 7.950e-35 Identity = 72/174 (41.38%), Postives = 103/174 (59.20%), Query Frame = 3
Query: 78 PSSTSYGGPMSDFSTCKC---------IFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIG-FGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKY 569
P + G +S FS+ C + RYL P+ G+ F + G + G+ DADWA D++ R+ST+GYVF N G ISW S+KQ V SSTEAEY+A EA KE V+L+ L +G E+ K+FE+N+ ++ L+K H RTKHI +R+H +RE + G + L+Y
Sbjct: 53 PDLAAAVGSLSQFSSDPCPTHWQALKRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEY 225
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 131 bits (330), Expect = 9.910e-35 Identity = 65/154 (42.21%), Postives = 98/154 (63.64%), Query Frame = 3
Query: 108 SDFSTCKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIGFGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKY 569
S + K I +YL T D+G+ F G G L G+ DA+WA D+D R+STTGYVF N ISW S++Q V SSTEAEY+A A +E V+LR+LL+ +G+ + +T ++++N+ + L+K H RTKHI +++H +RE + + L+Y
Sbjct: 57 SHWVAAKRILKYLKTTQDVGLVFNGGIKGE-LVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEY 209
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT) HSP 1 Score: 132 bits (332), Expect = 2.540e-34 Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 3
Query: 126 KCIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSTTGYVFKQNVGTISWCSRKQ*LVTWSSTEAEYVAPGEAGKETVYLRELLRSIGFGCRESTKLFEENKSAVNLSKRSGAHCRTKHIGVRWHGIREWIREGVLALKY 569
K + RY+ + G+ F GKS L G+ DADWA D+D R+ST+GYVF+ N T+SWCS++Q VT S+TEAEYVA A +E V+LR LL IG + + + E+N+ A+ LSK H RTKHI V +H +RE + + + + Y
Sbjct: 127 KRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNY 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31698.8541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31698.8541.1 >prot_H-paniculata_contig31698.8541.1 ID=prot_H-paniculata_contig31698.8541.1|Name=mRNA_H-paniculata_contig31698.8541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp MSDFSTCKCIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWAEDVDDRKSback to top mRNA from alignment at H-paniculata_contig31698:970..1541+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31698.8541.1 ID=mRNA_H-paniculata_contig31698.8541.1|Name=mRNA_H-paniculata_contig31698.8541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=572bp|location=Sequence derived from alignment at H-paniculata_contig31698:970..1541+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31698:970..1541+ >mRNA_H-paniculata_contig31698.8541.1 ID=mRNA_H-paniculata_contig31698.8541.1|Name=mRNA_H-paniculata_contig31698.8541.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=426bp|location=Sequence derived from alignment at H-paniculata_contig31698:970..1541+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |