prot_H-paniculata_contig31668.8537.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig31668.8537.1
Unique Name	prot_H-paniculata_contig31668.8537.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	100

Homology

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A6H5L2M1_9PHAE (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2M1_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 6.280e-53
Identity = 87/99 (87.88%), Postives = 94/99 (94.95%), Query Frame = 0

Query:    1 LKSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
            L+ +A+QWRRGTDTMDVWFDSGSSWAGV+KAR+EL YPADLYLEGSDQHRGWFQSSLLTSVA+N  APYKTVLTHGFVLDEKGYKMSKSLGNTLDP +V
Sbjct:  629 LQGEADQWRRGTDTMDVWFDSGSSWAGVAKAREELDYPADLYLEGSDQHRGWFQSSLLTSVAANGHAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPTEV 727

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A7S1CY54_CYCTE (Isoleucyl-tRNA synthetase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY54_CYCTE)

HSP 1 Score: 179 bits (453), Expect = 2.310e-51
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 0

Query:    2 KSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
            K QA++W++GTDTMDVWFDSGSSW GV+K R EL YPAD+YLEGSDQHRGWFQSSLLTSVA+N  APYKTVLTHGFVLDEKG+KMSKSLGN +DPMQV
Sbjct:  121 KDQADKWKKGTDTMDVWFDSGSSWNGVAKTRDELAYPADIYLEGSDQHRGWFQSSLLTSVAANNQAPYKTVLTHGFVLDEKGFKMSKSLGNVIDPMQV 218

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A8J9WZV3_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WZV3_PHATR)

HSP 1 Score: 176 bits (445), Expect = 1.850e-50
Identity = 77/99 (77.78%), Postives = 93/99 (93.94%), Query Frame = 0

Query:    1 LKSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
             +++A++W++GTDTMDVWFDSGSSWAGV+++R EL YPAD+YLEGSDQHRGWFQSSLLTSVA+N  APYKTVLTHGFVLDEKG+KMSKSLGN +DP++V
Sbjct:   81 FRAEADKWQKGTDTMDVWFDSGSSWAGVAQSRDELAYPADMYLEGSDQHRGWFQSSLLTSVANNNIAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKV 179

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A7S0LI09_9EUKA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LI09_9EUKA)

HSP 1 Score: 177 bits (449), Expect = 1.430e-49
Identity = 81/99 (81.82%), Postives = 90/99 (90.91%), Query Frame = 0

Query:    1 LKSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
            LKS+A +WR+GTDTMDVWFDSGSSW+GV+ +R +L YPADLYLEGSDQHRGWFQSSLLTSVA+N  APYKTVLTHGFVLDEKGYKMSKSLGN +DP  V
Sbjct:  567 LKSEAARWRKGTDTMDVWFDSGSSWSGVADSRSKLSYPADLYLEGSDQHRGWFQSSLLTSVAANGVAPYKTVLTHGFVLDEKGYKMSKSLGNVIDPRSV 665

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A7S0BWH6_9STRA (Isoleucyl-tRNA synthetase (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWH6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.920e-49
Identity = 77/98 (78.57%), Postives = 88/98 (89.80%), Query Frame = 0

Query:    2 KSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
            K++A +W++GTDTMDVWFDSGSSWAGV+K R EL YPAD+YLEGSDQHRGWFQSSLLTSVA+N  APYK VLTHGFVLDEKG+KMSKSLGN + PM +
Sbjct:   67 KAEAHKWKKGTDTMDVWFDSGSSWAGVAKGRDELAYPADVYLEGSDQHRGWFQSSLLTSVAANGQAPYKAVLTHGFVLDEKGFKMSKSLGNVISPMMM 164

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A1Z5JP77_FISSO (Isoleucine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP77_FISSO)

HSP 1 Score: 177 bits (448), Expect = 2.000e-49
Identity = 81/98 (82.65%), Postives = 91/98 (92.86%), Query Frame = 0

Query:    2 KSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
            K +AE+W +GTDTMDVWFDSGSSWAGV+++R EL YPAD+YLEGSDQHRGWFQSSLLTSVA+N  APYKTVLTHGFVLDEKG+KMSKSLGN +DPMQV
Sbjct:  573 KHEAEKWVKGTDTMDVWFDSGSSWAGVAQSRNELAYPADMYLEGSDQHRGWFQSSLLTSVANNDQAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPMQV 670

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A7S1ZYZ0_9STRA (Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYZ0_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.770e-49
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 0

Query:    2 KSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
            K +AE+W++GTDTMDVWFDSGSSWAGV+ AR EL YPADLYLEGSDQHRGWFQSSLLTSVA+   APYKTVLTHGFVLDEKGYKMSKSLGN +DP++V
Sbjct:  597 KEEAEKWKKGTDTMDVWFDSGSSWAGVASARDELQYPADLYLEGSDQHRGWFQSSLLTSVAAQGQAPYKTVLTHGFVLDEKGYKMSKSLGNVIDPLKV 694

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A7S2A607_TRICV (Isoleucine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A607_TRICV)

HSP 1 Score: 174 bits (442), Expect = 4.870e-49
Identity = 78/98 (79.59%), Postives = 91/98 (92.86%), Query Frame = 0

Query:    2 KSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
            K++A++W++GTDTMDVWFDSGSSWAGV+K R EL YPAD+YLEGSDQHRGWFQSSLLTSVA+   APYKTVLTHGFVLDEKG+KMSKSLGN +DP++V
Sbjct:  280 KNEADKWKKGTDTMDVWFDSGSSWAGVAKGRSELAYPADIYLEGSDQHRGWFQSSLLTSVAAQGKAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKV 377

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: B7FRF4_PHATC (Isoleucine--tRNA ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRF4_PHATC)

HSP 1 Score: 176 bits (445), Expect = 5.130e-49
Identity = 77/99 (77.78%), Postives = 93/99 (93.94%), Query Frame = 0

Query:    1 LKSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
             +++A++W++GTDTMDVWFDSGSSWAGV+++R EL YPAD+YLEGSDQHRGWFQSSLLTSVA+N  APYKTVLTHGFVLDEKG+KMSKSLGN +DP++V
Sbjct:  584 FRAEADKWQKGTDTMDVWFDSGSSWAGVAQSRDELAYPADMYLEGSDQHRGWFQSSLLTSVANNNIAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKV 682

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BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Match: A0A1E7F759_9STRA (Isoleucine--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F759_9STRA)

HSP 1 Score: 175 bits (443), Expect = 8.240e-49
Identity = 79/99 (79.80%), Postives = 90/99 (90.91%), Query Frame = 0

Query:    1 LKSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHRGWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV 99
            LK++A++W++GTDTMDVWFDSGSSWAGV+  R EL YPAD+YLEGSDQHRGWFQSSLLTSVA N  APYKTVLTHGFVLDEKG+KMSKSLGN +DP+ V
Sbjct:  462 LKAEADKWKKGTDTMDVWFDSGSSWAGVASTRDELAYPADMYLEGSDQHRGWFQSSLLTSVAVNDQAPYKTVLTHGFVLDEKGFKMSKSLGNVIDPLYV 560

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig31668.8537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2M1_9PHAE	6.280e-53	87.88	Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S1CY54_CYCTE	2.310e-51	82.65	Isoleucyl-tRNA synthetase n=1 Tax=Cyclophora tenui...	[more]
A0A8J9WZV3_PHATR	1.850e-50	77.78	Hypothetical protein n=1 Tax=Phaeodactylum tricorn...	[more]
A0A7S0LI09_9EUKA	1.430e-49	81.82	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Coccoli...	[more]
A0A7S0BWH6_9STRA	1.920e-49	78.57	Isoleucyl-tRNA synthetase (Fragment) n=1 Tax=Probo...	[more]
A0A1Z5JP77_FISSO	2.000e-49	82.65	Isoleucine--tRNA ligase n=2 Tax=Fistulifera solari...	[more]
A0A7S1ZYZ0_9STRA	2.770e-49	82.65	Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwell...	[more]
A0A7S2A607_TRICV	4.870e-49	79.59	Isoleucine--tRNA ligase n=1 Tax=Trieres chinensis ...	[more]
B7FRF4_PHATC	5.130e-49	77.78	Isoleucine--tRNA ligase n=2 Tax=Phaeodactylum tric...	[more]
A0A1E7F759_9STRA	8.240e-49	79.80	Isoleucine--tRNA ligase n=1 Tax=Fragilariopsis cyl...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002301	Isoleucine-tRNA ligase	PRINTS	PR00984	TRNASYNTHILE	coord: 10..23 score: 62.24 coord: 44..53 score: 85.0
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 2..99 e-value: 1.0E-33 score: 116.5
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 3..99 e-value: 3.8E-46 score: 159.5
None	No IPR available	PANTHER	PTHR42765:SF3		coord: 4..99
None	No IPR available	PANTHER	PTHR42765	FAMILY NOT NAMED	coord: 4..99
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 5..99

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig31668	contig	H-paniculata_contig31668:359..1470 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig31668.8537.1	mRNA_H-paniculata_contig31668.8537.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig31668 359..1470 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig31668.8537.1 ID=prot_H-paniculata_contig31668.8537.1|Name=mRNA_H-paniculata_contig31668.8537.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp
LKSQAEQWRRGTDTMDVWFDSGSSWAGVSKARKELGYPADLYLEGSDQHR
GWFQSSLLTSVASNRCAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPMQV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002301	Ile-tRNA-ligase
IPR002300	aa-tRNA-synth_Ia
IPR014729	Rossmann-like_a/b/a_fold