mRNA_H-paniculata_contig3165.8532.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3165.8532.1
Unique NamemRNA_H-paniculata_contig3165.8532.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: A0A6H5JJK2_9PHAE (CRM1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 3.090e-71
Identity = 138/153 (90.20%), Postives = 144/153 (94.12%), Query Frame = 3 
Query:  267 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDVAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDMADL 725
            DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD AQHP VTSNRQYV DFVGNLLL+SFPNLTKAQVA FVAGLLN+ MDL TFKLHLRDFLVTLKEFSTEDNADLF EEN+AKK+ DE+KAR+AQLAVPGLVNPHD PEDDMADL
Sbjct:  795 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDAAQHPGVTSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVAGLLNSDMDLNTFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKQADEDKARQAQLAVPGLVNPHDLPEDDMADL 947
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: A0A6U1LIT5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LIT5_9STRA)

HSP 1 Score: 196 bits (497), Expect = 5.860e-52
Identity = 99/153 (64.71%), Postives = 122/153 (79.74%), Query Frame = 3 
Query:  267 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDVAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDMADL 725
            DILAVMTDRLHKSGFK+HATLLRHMF LVE G VT  L+DVAQ P+  +N +++ + V N+L+SSFPNLT++QV  FV GL N  MDL +FK HLRDFL+ LKEFS EDN DLF EEN  +K++++ +A   +LAVPGL+NPH+RP DDMADL
Sbjct:  156 DILAVMTDRLHKSGFKLHATLLRHMFHLVEMGQVTAPLFDVAQFPSNKTNHEFLREHVANMLISSFPNLTRSQVLQFVVGLFNVNMDLQSFKTHLRDFLIQLKEFSAEDNTDLFNEENQRQKQQNDAQALAQKLAVPGLLNPHERP-DDMADL 307
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: D8LS67_ECTSI (CRM1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 1.140e-41
Identity = 90/107 (84.11%), Postives = 99/107 (92.52%), Query Frame = 3 
Query:  405 VTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDMADL 725
            + SNRQYV DFVGNLLL+SFPNLTKAQVA FV+GLLN+ MDL TFKLHLRDFLVTLKEFSTEDNADLF EEN+AKK+ D++KAR+AQLAVPGLVNPHD PEDDMADL
Sbjct:  690 IQSNRQYVMDFVGNLLLTSFPNLTKAQVAVFVSGLLNSDMDLNTFKLHLRDFLVTLKEFSTEDNADLFLEENLAKKQADQDKARQAQLAVPGLVNPHDLPEDDMADL 796
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: F0YHQ5_AURAN (Importin N-terminal domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHQ5_AURAN)

HSP 1 Score: 173 bits (439), Expect = 5.290e-40
Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 3 
Query:  267 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD-VAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDD 713
            D+LAVMTDRLHKSGFKMHATLLRH+F LVEAGHVT  L+D   ++P   SN+ ++ D V NLL +SFPNL++ Q+  FV GL +  MDL TFK HLRDFL+ LKEFS ++N DL+ EE  A++    E+   A+LAVPGLVNPHDRP DD
Sbjct:  913 DVLAVMTDRLHKSGFKMHATLLRHLFHLVEAGHVTAPLFDDPTKYP---SNQAFLRDHVANLLSTSFPNLSRQQIVDFVVGLFDLRMDLPTFKTHLRDFLIQLKEFSEQNNQDLYSEERAAQQVAVAEQQNAARLAVPGLVNPHDRPMDD 1059
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: A0A7S2AWL8_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWL8_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.350e-39
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 3 
Query:  267 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDVAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDMADL 725
            D+L VMTDRLHKSGFKMHATLLRHMF +VE G VT+ L+D A     T+N+ ++ + + NLLLSSFPNLTK QV  FV+GL++  MDL TFK HLRDFLV LKEFS EDN  L+ EE   +  +D  K +  + AVPGLVNP++  + DMADL
Sbjct:  956 DLLYVMTDRLHKSGFKMHATLLRHMFHVVELGQVTVPLFDHASVAPGTTNQTFLREHIANLLLSSFPNLTKNQVIKFVSGLMDRNMDLPTFKSHLRDFLVALKEFSVEDNQGLYDEERQKQHEQDMAKEQARRAAVPGLVNPYEVADPDMADL 1108
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: A0A7R9ZL58_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZL58_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.360e-38
Identity = 82/148 (55.41%), Postives = 103/148 (69.59%), Query Frame = 3 
Query:  267 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDVAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPED 710
            D+ AVMTDRLHKSGFKMHATLLR MF LV+   VT+ L+D A  P   +N  ++   V  LLLSSFPNLTK QV  F+ G+LN  MDL TFK HLRDFL+ LKEFS+EDN+ L+ EE   ++++  ++    + AVPG+V P D  ED
Sbjct:  117 DVFAVMTDRLHKSGFKMHATLLRQMFHLVQMNQVTVPLFDPASQPAGQTNPAFLRAHVSTLLLSSFPNLTKTQVTKFIEGMLNLQMDLPTFKTHLRDFLIELKEFSSEDNSALYTEEKERERQQHRQQMLAQRQAVPGMVKPADIDED 264
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: A0A7S2P7R7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P7R7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.930e-38
Identity = 82/150 (54.67%), Postives = 108/150 (72.00%), Query Frame = 3 
Query:  267 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDVAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDM 716
            D+ AVMTDRLHKSGFKMHATLLR MF LV+   VT+ L+D A  P   +N  ++ + + NLL+ SFPNLTK+QV+ FV G+ +  MDL +FK HLRDFL+ LKEFSTEDN+ LF EE  A++R+  E  +  + AVPGL+ P +  +DD+
Sbjct:  212 DVFAVMTDRLHKSGFKMHATLLRQMFHLVQMNQVTVPLFDPANAPAGQTNPSFLREHISNLLIQSFPNLTKSQVSKFVDGMFDLNMDLPSFKTHLRDFLIQLKEFSTEDNSGLFGEEQDAQQRQQLEAQQAYRSAVPGLMKPSEIIDDDL 361
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: A0A8J2X2G4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2G4_9STRA)

HSP 1 Score: 167 bits (424), Expect = 3.640e-38
Identity = 91/153 (59.48%), Postives = 107/153 (69.93%), Query Frame = 3 
Query:  267 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDVAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDMADL 725
            D+LAVMTDRLHKSGFKMHATLLRH+F LVEAGHVT+ L+D   +P   +N+ ++ + V NLL SSFPNLT  QV  FV G  +  MDL +FK HLRDFLV LKEFS E+N DL+ E            A   +LAVPGLVNP+DRP DD  DL
Sbjct:  960 DVLAVMTDRLHKSGFKMHATLLRHLFHLVEAGHVTVPLFDGGNYP---TNQAFMREHVANLLKSSFPNLTHQQVVDFVVGCFDLRMDLPSFKTHLRDFLVQLKEFSAENNQDLYSEXXXXXXXXXXXXAEAQRLAVPGLVNPNDRPMDDDEDL 1109
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BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: M4BY55_HYAAE (Importin N-terminal domain-containing protein n=27 Tax=Oomycota TaxID=4762 RepID=M4BY55_HYAAE)

HSP 1 Score: 167 bits (422), Expect = 4.960e-38
Identity = 90/157 (57.32%), Postives = 117/157 (74.52%), Query Frame = 3 
Query:  267 DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYD----VAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDMADL 725
            DILAV+TDRLHK GFK+HA +LRHMF +VE  HVT+ L++    VA  P   +N  ++ D+V NL+ SSFPNL++AQV  FV G  +   DL TFK HLRDFLV +KEF+ EDNA+LF EEN+A+ +  E++   A+LAVPGLVNP++RP D+MADL
Sbjct:  851 DILAVLTDRLHKFGFKLHAAVLRHMFAIVENNHVTVPLWEGVPNVAAMPPGQTNSAFLKDYVANLIGSSFPNLSRAQVVQFVVGCFDMSKDLPTFKKHLRDFLVNIKEFAGEDNAELFLEENLARTQLQEKQDLAAKLAVPGLVNPNERP-DEMADL 1006
[Close]
BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Match: A0A4D9D6W4_9STRA (Importin N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6W4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 8.010e-38
Identity = 85/159 (53.46%), Postives = 113/159 (71.07%), Query Frame = 3 
Query:  249 ICDIE*DILAVMTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDVAQHPNVTSNRQYVADFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEFSTEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDMADL 725
            + D+  DI  VMTDRLHKSGFKMHATLLR  F L+E G V+  L+D +  P   +N+Q+V   V  LL  SFPNLT++ +  FVAGL +   DLT +K HLRDFLV LKEFS EDN+DLF+EE   ++ + E++ R ++LAVPG+VNP++ P+ D+ DL
Sbjct:  933 LLDLITDIFVVMTDRLHKSGFKMHATLLRQTFSLIELGQVSAPLFDPSTQPPGQTNQQFVRHSVLELLSRSFPNLTRSMIVEFVAGLFDQSKDLTAYKTHLRDFLVQLKEFSAEDNSDLFHEEAALQRTQQEKEQRLSKLAVPGMVNPYEAPDPDLGDL 1091
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3165.8532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJK2_9PHAE3.090e-7190.20CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6U1LIT5_9STRA5.860e-5264.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LS67_ECTSI1.140e-4184.11CRM1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
F0YHQ5_AURAN5.290e-4061.33Importin N-terminal domain-containing protein n=2 ... [more]
A0A7S2AWL8_9STRA1.350e-3959.48Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7R9ZL58_9STRA1.360e-3855.41Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2P7R7_9STRA1.930e-3854.67Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A8J2X2G4_9STRA3.640e-3859.48Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
M4BY55_HYAAE4.960e-3857.32Importin N-terminal domain-containing protein n=27... [more]
A0A4D9D6W4_9STRA8.010e-3853.46Importin N-terminal domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3165contigH-paniculata_contig3165:536..6109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.8
Seed ortholog evalue2.3e-43
Seed eggNOG ortholog2880.D8LS67
Preferred nameXPO1
KEGG koko:K03939,ko:K14290
KEGG TC1.I.1,3.D.1.6
KEGG Pathwayko00190,ko01100,ko03008,ko03013,ko04013,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,ko05164,ko05166,ko05169,map00190,map01100,map03008,map03013,map04013,map04714,map04723,map04932,map05010,map05012,map05016,map05164,map05166,map05169
KEGG ModuleM00143
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000054,GO:0000055,GO:0000056,GO:0000122,GO:0000775,GO:0000776,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0005049,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0005911,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0007275,GO:0008104,GO:0008150,GO:0008565,GO:0009266,GO:0009408,GO:0009506,GO:0009553,GO:0009555,GO:0009628,GO:0009653,GO:0009826,GO:0009846,GO:0009856,GO:0009860,GO:0009889,GO:0009890,GO:0009892,GO:0009932,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016049,GO:0019219,GO:0019222,GO:0019904,GO:0022414,GO:0022613,GO:0030054,GO:0030154,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0032386,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033036,GO:0033157,GO:0033750,GO:0034613,GO:0040007,GO:0042221,GO:0042254,GO:0042493,GO:0042886,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045184,GO:0045892,GO:0045934,GO:0046822,GO:0046825,GO:0046907,GO:0048229,GO:0048468,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051252,GO:0051253,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0055044,GO:0060255,GO:0060341,GO:0060560,GO:0065007,GO:0070201,GO:0070727,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090087,GO:0098687,GO:0140104,GO:0140142,GO:1902679,GO:1903506,GO:1903507,GO:1903827,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.nuclear export signal receptor activity
EggNOG OGsCOG5101@1,KOG2020@2759
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-12_004630.1
COG Functional cat.UY
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03009,ko03016,ko03019,ko03036
Exons3
Model size4734
Cds size447
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3165.8532.1prot_H-paniculata_contig3165.8532.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3165 4542..5828 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929975.1334572-UTR-H-paniculata_contig3165:535..45411622929975.1334572-UTR-H-paniculata_contig3165:535..4541Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3165 536..4541 -
1691481093.9765286-UTR-H-paniculata_contig3165:535..45411691481093.9765286-UTR-H-paniculata_contig3165:535..4541Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3165 536..4541 -
1622929975.20158-UTR-H-paniculata_contig3165:5828..61091622929975.20158-UTR-H-paniculata_contig3165:5828..6109Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3165 5829..6109 -
1691481094.0303938-UTR-H-paniculata_contig3165:5828..61091691481094.0303938-UTR-H-paniculata_contig3165:5828..6109Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3165 5829..6109 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929975.1464548-CDS-H-paniculata_contig3165:4541..46941622929975.1464548-CDS-H-paniculata_contig3165:4541..4694Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3165 4542..4694 -
1691481093.9915423-CDS-H-paniculata_contig3165:4541..46941691481093.9915423-CDS-H-paniculata_contig3165:4541..4694Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3165 4542..4694 -
1622929975.1632936-CDS-H-paniculata_contig3165:5031..51961622929975.1632936-CDS-H-paniculata_contig3165:5031..5196Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3165 5032..5196 -
1691481094.002246-CDS-H-paniculata_contig3165:5031..51961691481094.002246-CDS-H-paniculata_contig3165:5031..5196Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3165 5032..5196 -
1622929975.1863787-CDS-H-paniculata_contig3165:5699..58281622929975.1863787-CDS-H-paniculata_contig3165:5699..5828Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3165 5700..5828 -
1691481094.0184903-CDS-H-paniculata_contig3165:5699..58281691481094.0184903-CDS-H-paniculata_contig3165:5699..5828Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3165 5700..5828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3165.8532.1

>prot_H-paniculata_contig3165.8532.1 ID=prot_H-paniculata_contig3165.8532.1|Name=mRNA_H-paniculata_contig3165.8532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp
MTDRLHKSGFKMHATLLRHMFQLVEAGHVTLELYDVAQHPNVTSNRQYVA
DFVGNLLLSSFPNLTKAQVAGFVAGLLNAGMDLTTFKLHLRDFLVTLKEF
STEDNADLFYEENMAKKREDEEKARRAQLAVPGLVNPHDRPEDDMADL*
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mRNA from alignment at H-paniculata_contig3165:536..6109-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3165.8532.1 ID=mRNA_H-paniculata_contig3165.8532.1|Name=mRNA_H-paniculata_contig3165.8532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5574bp|location=Sequence derived from alignment at H-paniculata_contig3165:536..6109- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTTTTTGCACGGTTCTCTTGGCGTATTGCATTGTCTTGGTTGAGAGTTT
CCCCCTCTGCGGTTTCGAGAGGCGACCGGCTCCCTAAAAGCTCCTCTGTG
CGTCGTATATGTTTATTTACTGGTCGAAAGTCAGGATTTTCGCCTTGGAT
ACATGAGTTTGATACGAAGCCGCTGCGAGCGTTTTTAAGCGTCAACACAA
ATAGGAAGAACACGAAGAAAAAATCGTGATCTCACTCTTCTCAACTCCAT
TTGCGATATTGAGTAGGACATACTGGCGGTGATGACGGACCGACTACACA
AGAGTGGCTTCAAGATGCACGCCACTTTGCTGAGGCACATGTTCCAGCTG
GTGGAAGCAGGACACGTGACGCTCGAGCTCTACGACGTCGCGCAGCATCC
GAATGTTACGGTAGGTCCGCGCTTGGGTTATTTTGTAAGCGCGGGGTGGG
TGCGGTGGGTCGGGCGTTGTGTCTATTGGCCGCCGCCGTGCAACGTTGCT
TGCTTTATCTCAGGACTTTTTTGCTATTTTCCTAGCCGTGAAACGTGGTA
ACCCGATAGCTCGTCAGGCGGGGGGGAACAGGGGCGAGGGGGGTGAGCTT
CATATGCTGCTGGCTGCGCGATCGACTTGTATCGACCCCACTGCGGTGGA
AGTTATGGGCATGAAAAGTTGATGACGCTTAACCCTCGCTTCTGTTGAAC
AAGAAACCCCCCCGCACCAGCAATAGATGGGTTTTGAACCTCTGCAGCAA
ACCCGAGGTAATGGAATACGCTCATATATATCCAGTACCTCGCGTACGTC
GACTACGTACCGAGTTGATGCCTTTGAGCTGATGATTGCCGCGAGGATCG
TGTCAACTGACCGATTGCGACCACCGCCTCTATGCGTGCGCACTTTATCT
TCGTGTCCGGCAGAGTAACCGACAGTACGTGGCAGACTTCGTGGGGAACT
TGCTCCTGTCGTCCTTCCCCAACCTGACCAAGGCTCAGGTGGCCGGGTTT
GTAGCTGGGTTGTTAAACGCCGGGATGGACCTGACGACGTTCAAGCTTCA
CCTTCGAGACTTCCTCGTAACGCTCAAGGTGAGGCAGTTGGTGGTGACCG
GACTCAGAAAGTATAATTGAGCTAGACACGTGAAGACGTAAGACTCGGGG
GTAGCTCCTTGGTTAGGAAGCACATTTTGTTTTTGCATTTTATCGGGGAG
AAAGCGTGTTGGGTGTTGGGTGTTGGCGTTGATGATTTGATGACTTGCCA
TTCTTGTTTTGGTCGGGGTGGGGGGAACTATTCAAACCCTGCGTGTGTGT
TCGTATTACTCATATATTGTCAATACATGCGTGCCATACCGTCAGGGTCC
AATTATTTGGTGATTATGTACCCGTCCACTGTACGGTTTTGCACACCGGT
ACACGCTCTTTTCAGGAATTCTCGACGGAAGATAACGCAGATCTGTTTTA
CGAGGAGAACATGGCCAAGAAGCGGGAGGACGAAGAAAAGGCGAGACGAG
CGCAGCTTGCCGTGCCGGGATTGGTCAACCCTCACGATCGACCGGAGGAT
GACATGGCAGATCTATGATGCCTGCCCCCCGCCGCACTCGTCGTACAAAC
AGCGTACTATGGTACGCACTTCTTTCCCTTTTTTTTCGCTGCGCCCCCAT
TCCGTACCATTTCGCCGTGTGCCTACTTCGCGTGACGGGTTTCCGAGGTT
CTGCTCTCGCTCTGCTAGATGGAAGGAGGACGAGAGGGATCGGGGAGGGT
CGAGTCTCTCACACCTCTACTTTTGTACTATCATTTCTCGGTCCCGTACT
ATACGACAGACAAGTAATCAAAGTCACGGTCAGGGTCGTGTGCGATCATG
GTAATTATTCTGCTACCTTGGCATACATGTGATCTGCCGCCGTCGAACAG
GGTAATTGTGTGTGTGGGGGGGTAATGGTTGTCCGCGTACACCGCACGTG
CGTGGGTACGTGTGTTGGTTGGGGGTGTTTGTCTTTCTCTTCTTTGTGCC
TTCTTCAATACTGTTCCCGGTCCACGTGCCTTTCACGAGCCAGCTGAAAA
TGGAATCGACGGTACTTTTTTCTGTCTGAGGATTGTTGTTTTCCTCGCCA
CTTCTTCCCCCTCCCTAACCACTATCATTAGTCCTCCCTTCTCCTACCCT
CGCCCATGCCCACCCTCTCTCTACCTGTCTAAAGTTAACAGTACATTTTT
TTTCTCTCGGGAGGGCAGAGGGGAAGGGAGAGGGGTCTATCTTGGGGGGG
GAATGGTAGTCGCGGAGAGGTTGTGGATGATGGCACATGCACCGGTGTAC
AGGTGACGCCGGAGCTAGATCGTGGTTAAAAGTGCATGGAAGGGCGGGGC
AACTACCAGTACGGGGTTCAAGGCATTTTCTGTCGGGTGTATGTGGTGAG
GTCGCGTGTGTGGCGGAAGTGGGGCAAGTGGTAGAGGTTGTGTTTGTTGA
GTGTGGAAGGTTAATTTGGATCTGAATTTTGTCGACCTTGCCGGATGCGG
GGGAGATGGCCGAGTAAAATGTTATTTGCAATTTGCTGAAGGGGTCACAG
GTGGTGGTACAAACCGAGGCCATTTGAGTTCATGGGTGATGGAGATTTGT
TTGCGCTGCATGAGTACGCTTATGGTATGCACAAGAGAGGTTGAACAAAA
TACAGAACGTATTTGCGTTGTTCTCCTCTTGTCCTGTCGCGCGTACCTTG
CTTGACTGCCCTGATCCTGTCCCCCGTCCCCTTCCCGCCTAACTTTGGCG
GGAGATGATTGTGCTTCGGTAGCTCGTGCGGGGAAATAGCGGGGCTATTA
GTATACCGTACGATTGACAGGATTCAGGGACAAAAAGGCCAGTGGTGGGT
AGGAGTGAAGGAAAGGGATGTGTGAGGCTATTTTTTTCCCCTGTGTGATG
ATGAGGATTGTTCACCGGGGAAAAATGTAGGAGCCCGTAAATGGCAATAC
ACGGAAGAGTATAAATTGGTGCGCGTCCATTGTTCATCCAGTCCAAAGAA
AGGGAATAAATATTCAACGTTCTTCTGTGCATCTTCAGTCAGTCGGCGGT
TCGAGCCAATTTGAGTAGCACACGAAACCTGGGGTATCCTCGTCGAGCAC
GCTCTAGTGTGGCGAGCGATGGACATCGGTTTGATTCGTACAGTTACATT
TCCTCTTGATGTAAAAGGTTCGACATCTTCGCTCTTGTCCGAAGAACACA
TCGGGTTTCGTGCGGTTTGCACAAATAAAGTCTGTTGACCAAGAATAACC
GCCATTTGTGGTATGATGGAGGAAAAGAAGTTTGGACTCGTGGCAGTTAC
TGTGAAAATATTATCGGAAATCTGGGCTGAAAATGGGCACTAGGAACTTG
TGGGCCCCCTTTATTGCCCGGCTTTCCGCCTCTTCGTACCTCCGGGTTGA
CTCGAACTTGATTTCATTCTGAACCTATCTGTACCCCTAGCTTGTCTTGG
CTCCTCTGAATCGATTCGAGGCTCACTTCTGCGGCTGTTCGCGCTGCCCC
ACGCCGTAACTAGTGCGTGTGTGACGGTAGGATCACTGGCGGCGATGTTC
CCGTCTTGGCGAGGTGAAGATAGGTGCGTTGGGGGAGGGCTCGTTGGAAG
GCGAAGGAGGAGCTTCGCCCGAGTTGGACTGTTCCCCGTCCCCGGGTCGC
CGCTTGTTATTTTTCGTCCGTCCAGTGGTTCCGTCTCATCACTAGGTGGT
GGGCAAGCTCCTTGTGGAAGGATAGTGGATTCACGGCGACTGGTCCGTGT
TTTGCGTTTTTTTATGGATGATTTCAATGCTCAATTCAAAGTCAATCCGT
TTGATAGAATATTTGCTCGAATATGTGGTGTTTGCCTTGCGTCAGATGTT
AGCTCCTGTTGCTAATACATACTGCAGCGAGAGAGAATAACTGCGTAGTG
GTTGAGCTTCGAGAAGAAAGTGGAGGGTGCTATAATAAACCAACGGGTCT
AAAGTGAACATGTAAGAACCATTGGTGCATCGAAATAAATTCCGAATTAG
AATTTGAACTTTGGAATAATCGATTGAAGCCCGCTCGAGTCTCGCCGCGA
TCAGCAACCACCGCATTTTTTTTTTGCAAGTCTACTCGCCACTATCAAAC
ACTTGTCCTTTGGGCCACACAGCAGCTTCAGCTATCGTGACTCCTGAAGG
CATGTGCTGAGACGAGTACCTGTTGATCATTTTTGTCATGTTGGAGATCA
CGGGAGTGGAGTCCCTGCTCTTATGCGGCAGGTAGGTACTTCAATACCGT
TGACAGGAAAATAGGCACGAGAATCCACACGGACTGCATCCTCTTCGTAG
CTAAATTACTGCGCAGATGAACAACGAAAAGGCATGCTCGCTCGTGCCGT
GTCGGAACAAATGCCATCGACAGTAAAGGAGACACATCGACCCCACGCAC
AAATTCAGGTACCAGAAAGGCTCGTGGTTTGTACCCCACTCAATCCTCGT
GCACTGCGGTCCGGGCAAGTTGTGTACGCTACACTAGCCGGGCCTCCTCA
GCTGGCTGCTCGTCAAGTTTTTTAAACAGTTGTGAAAATGGGTTCACAGA
GGAGATCTGAACGACTCAAGGAGGATATTGAGCATACTTTTGGATCGAAA
TAAACAGACGCGGCAGTTGTAACTAGGGAAGCAACCTTCTCACAGAGTGG
CACGCCAAGACTGCATCCCCAAGGGTGAGCCCAGTTATCACATAACATGA
ATCAATTTGTTACCCTTCAAGGTCTCTTCTAGGAAGGAATATCTACGACG
AAGAAGTCGCGGTTTTCTTTGAGGCATGATGTTTTGATGTTTTTCAACTC
TAAATTTGCGATTTTCATGCTGATTGGACTTGCGATGGCCCATTATTATA
TGCAGTTCATATAGCGAAGTCGGCTGCTCCATGTATAGCAAGTGAGACGG
TATGCATAAACCGTAGAGAAAGCGCATGCGAGAGGGGGAAAGCGTCTCCG
TTCGTAGGGCCTCCATCTAGGCCGCTACCGCACGTGAGGCGCCCTTGTAG
AGGGGCTTGATACCGTGTACGGCCAGTATGATGCGGATACTCTTGGGTCG
GTTTGGCAGAGCCTCTTCAAGCGTTACAACCAAATGTTGAAACCGCTGAG
GGAAAACGTTTGGAAATTGGATATACCAGGAGCAGGAAAAGGCAGCGTGA
GGGGCTTTTGGATCTCTTGGTCCCGATTGACAGAGCCGCTTATGACGCGG
CCTTCAATTGGCGAAATAACAATGTCTACTAGTAGTTTAGAATTGGGTTT
GGGTTTTCCAACAGTGTGTACTATAATAATGGTTTTGGGGTAGGTCTTAT
TCGTAAGGATGAAACGTGTTCTAACCATTTTCATGGTATTACGTGCTGAA
TCAAGCATTACTTGAACAGAGTCGGTGAAAGTACATGGCATTAGCGTTCC
TTGGGAATTGGTGTTTTTTCATGTTGAGTCTTCTGCCTCGGAGATATTGG
CGTTGAAAACAATAATCTAGTAGCCGTTCATTGTTCCCCTTGATTTTTTT
TGTTTTGCCCTATACCTTGAGATTCCCTTGGGCCAATTTTGATCGAAAAT
GGACGTGTTGTATCCCTATAGAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig3165:536..6109-

>mRNA_H-paniculata_contig3165.8532.1 ID=mRNA_H-paniculata_contig3165.8532.1|Name=mRNA_H-paniculata_contig3165.8532.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig3165:536..6109- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGGACCGACTACACAAGAGTGGCTTCAAGATGCACGCCACTTTGCT
GAGGCACATGTTCCAGCTGGTGGAAGCAGGACACGTGACGCTCGAGCTCT
ACGACGTCGCGCAGCATCCGAATGTTACGATGACGGACCGACTACACAAG
AGTGGCTTCAAGATGCACGCCACTTTGCTGAGGCACATGTTCCAGCTGGT
GGAAGCAGGACACGTGACGCTCGAGCTCTACGACGTCGCGCAGCATCCGA
ATGTTACGAGTAACCGACAGTACGTGGCAGACTTCGTGGGGAACTTGCTC
CTGTCGTCCTTCCCCAACCTGACCAAGGCTCAGGTGGCCGGGTTTGTAGC
TGGGTTGTTAAACGCCGGGATGGACCTGACGACGTTCAAGCTTCACCTTC
GAGACTTCCTCGTAACGCTCAAGAGTAACCGACAGTACGTGGCAGACTTC
GTGGGGAACTTGCTCCTGTCGTCCTTCCCCAACCTGACCAAGGCTCAGGT
GGCCGGGTTTGTAGCTGGGTTGTTAAACGCCGGGATGGACCTGACGACGT
TCAAGCTTCACCTTCGAGACTTCCTCGTAACGCTCAAGGAATTCTCGACG
GAAGATAACGCAGATCTGTTTTACGAGGAGAACATGGCCAAGAAGCGGGA
GGACGAAGAAAAGGCGAGACGAGCGCAGCTTGCCGTGCCGGGATTGGTCA
ACCCTCACGATCGACCGGAGGATGACATGGCAGATCTATGAGAATTCTCG
ACGGAAGATAACGCAGATCTGTTTTACGAGGAGAACATGGCCAAGAAGCG
GGAGGACGAAGAAAAGGCGAGACGAGCGCAGCTTGCCGTGCCGGGATTGG
TCAACCCTCACGATCGACCGGAGGATGACATGGCAGATCTATGA
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