prot_H-paniculata_contig11324.853.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11324.853.1
Unique Nameprot_H-paniculata_contig11324.853.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: A0A8F0FEY2_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FEY2_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 9.790e-25
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            SV LNFLIFSVYLD+IMGQI A+FILAVAACESSVGLAIILVYYRVRGSI VDQA+LLK
Sbjct:   41 SVSLNFLIFSVYLDDIMGQIFAVFILAVAACESSVGLAIILVYYRVRGSIRVDQAALLK 99          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: A0A4Y5T8D2_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8D2_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.620e-23
Identity = 50/59 (84.75%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            S+ LNFLIFSVYLD+I+GQI A+FIL VAACESS+GLAIILVYYRVRGSI VDQASLLK
Sbjct:   41 SISLNFLIFSVYLDDIIGQIFALFILTVAACESSIGLAIILVYYRVRGSIRVDQASLLK 99          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: Q2TUC4_DICDH (NADH dehydrogenase subunit 4L n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUC4_DICDH)

HSP 1 Score: 91.7 bits (226), Expect = 9.340e-23
Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            S+ LNFLIFSVYLD+++GQI A+FIL +AACESS+GLAIILVYYRVRGSI +DQASLLK
Sbjct:   41 SISLNFLIFSVYLDDMIGQIFALFILTIAACESSIGLAIILVYYRVRGSIRIDQASLLK 99          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: A0A4Y5T7L0_9PHAE (NADH dehydrogenase subunit 4L n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A4Y5T7L0_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 2.050e-20
Identity = 42/60 (70.00%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLKY 60
            S+ LNFL+FSV+LD+I+GQ+  I +++VAACESSVGLA+ILVYYRVRGSIL+D+ASLL++
Sbjct:   46 SISLNFLLFSVFLDDIIGQLFGILVISVAACESSVGLALILVYYRVRGSILLDKASLLRF 105          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: Q94Z11_PYLLI (NADH dehydrogenase subunit 4L n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z11_PYLLI)

HSP 1 Score: 84.3 bits (207), Expect = 7.280e-20
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            SV LNF+IFSV LD++ GQI AIFIL +AACESS+GLAIILV++RVRGSI +DQASLLK
Sbjct:   41 SVSLNFIIFSVCLDDLTGQIFAIFILVIAACESSIGLAIILVFFRVRGSIRLDQASLLK 99          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: A0A1L2F1H7_9PHAE (Nad4L n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1H7_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 7.480e-20
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            SV LNF+IFSV L +++GQI AIFIL VAACESS+GLAIILVY+RVRGSI +DQASLLK
Sbjct:   42 SVSLNFIIFSVCLADLIGQIFAIFILIVAACESSIGLAIILVYFRVRGSIRIDQASLLK 100          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: E6ZER2_ECTSI (NADH-ubiquinone oxidoreductase, subunit 4L n=85 Tax=Phaeophyceae TaxID=2870 RepID=E6ZER2_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.960e-19
Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            SV LNF+IFS  L ++ GQI AIFIL +AACESSVGLAIILVY+RVRGSI +DQASLLK
Sbjct:   41 SVSLNFIIFSACLGDLTGQIFAIFILVIAACESSVGLAIILVYFRVRGSIRIDQASLLK 99          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: A0A8E8PEE6_9PHAE (Nad4L n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEE6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.970e-17
Identity = 42/58 (72.41%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    2 VRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            V L FLIFSV L ++ GQI AI+IL +AACESS+GLAIILVY+RV+GSI +DQASLLK
Sbjct:   42 VSLGFLIFSVCLGDLQGQIFAIYILVIAACESSIGLAIILVYFRVKGSIRLDQASLLK 99          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: A0A7S6ZPE7_9STRA (Nad4L n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPE7_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.980e-17
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            ++ LNFLI SVYLD+I+GQ+  +FIL VA CESS+GLAIIL YYRVRG I +++ASL+K
Sbjct:   41 ALGLNFLILSVYLDDILGQVFCLFILTVAGCESSIGLAIILAYYRVRGRIRMNEASLMK 99          
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Match: A0A1E1GHN9_9EUKA (NADH dehydrogenase subunit 4L n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A1E1GHN9_9EUKA)

HSP 1 Score: 77.4 bits (189), Expect = 4.190e-17
Identity = 37/59 (62.71%), Postives = 52/59 (88.14%), Query Frame = 0
Query:    1 SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSILVDQASLLK 59
            +V LNF+IFS+YLD+I+GQI ++F+L VAA ES++GLAI++VYYRVRG+I VD  +L+K
Sbjct:   43 AVNLNFIIFSIYLDDILGQIFSLFVLTVAAAESAIGLAILVVYYRVRGTIAVDYINLMK 101          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11324.853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FEY2_9PHAE9.790e-2589.83NADH dehydrogenase subunit 4L n=1 Tax=Protohalopte... [more]
A0A4Y5T8D2_9PHAE1.620e-2384.75NADH dehydrogenase subunit 4L n=1 Tax=Dictyopteris... [more]
Q2TUC4_DICDH9.340e-2379.66NADH dehydrogenase subunit 4L n=1 Tax=Dictyota dic... [more]
A0A4Y5T7L0_9PHAE2.050e-2070.00NADH dehydrogenase subunit 4L n=1 Tax=Ishige okamu... [more]
Q94Z11_PYLLI7.280e-2076.27NADH dehydrogenase subunit 4L n=1 Tax=Pylaiella li... [more]
A0A1L2F1H7_9PHAE7.480e-2077.97Nad4L n=1 Tax=Coccophora langsdorfii TaxID=74099 R... [more]
E6ZER2_ECTSI2.960e-1976.27NADH-ubiquinone oxidoreductase, subunit 4L n=85 Ta... [more]
A0A8E8PEE6_9PHAE1.970e-1772.41Nad4L n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID... [more]
A0A7S6ZPE7_9STRA3.980e-1766.10Nad4L n=1 Tax=Schizocladia ischiensis TaxID=196139... [more]
A0A1E1GHN9_9EUKA4.190e-1762.71NADH dehydrogenase subunit 4L n=1 Tax=Palpitomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likePFAMPF00420Oxidored_q2coord: 1..54
e-value: 2.4E-8
score: 33.5
IPR001133NADH-ubiquinone oxidoreductase chain 4L/KPANTHERPTHR11434NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT ND4Lcoord: 2..57
NoneNo IPR availablePANTHERPTHR11434:SF15NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4Lcoord: 2..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..60
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11324contigH-paniculata_contig11324:7746..7928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11324.853.1mRNA_H-paniculata_contig11324.853.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11324 7746..7928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11324.853.1 ID=prot_H-paniculata_contig11324.853.1|Name=mRNA_H-paniculata_contig11324.853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
SVRLNFLIFSVYLDNIMGQISAIFILAVAACESSVGLAIILVYYRVRGSI
LVDQASLLKY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039428NUOK/Mnh_C1-like
IPR001133NADH_UbQ_OxRdtase_chain4L/K