mRNA_H-paniculata_contig31620.8528.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A6H5K7I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7I9_9PHAE) HSP 1 Score: 191 bits (486), Expect = 4.560e-60 Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 1
Query: 7 SIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPR 330
SIAVFVLAGLCEIGGGWL+WQA+REK+ WWI PG LLLA YGFV LLPD SSAEFGRAFAVYGG+FIAMSL W +FDGF D GDYAGA V L GV +MWWYPR
Sbjct: 9 SIAVFVLAGLCEIGGGWLVWQAVREKRPRWWIIPGVLLLAAYGFVTPGLLPDVSSAEFGRAFAVYGGIFIAMSLGWGAVFDGFRADAGDYAGACVVLAGVAVMWWYPR 116
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A7S2TT53_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TT53_9EUKA) HSP 1 Score: 138 bits (348), Expect = 4.560e-39 Identity = 60/109 (55.05%), Postives = 79/109 (72.48%), Query Frame = 1
Query: 1 VRSIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYP 327
V A+F+ AGL EIGGGW++WQA+RE K WW G+++L YGF+P D +FG+ +AVYGGVFIAMS WA IFDG+ PD GDY G+A+ALVGVG++ ++P
Sbjct: 10 VHVAALFIFAGLAEIGGGWMVWQAVREGKPWWWALIGSIILVGYGFIPPLQPLD----DFGKLYAVYGGVFIAMSFGWAAIFDGYKPDMGDYIGSAIALVGVGVVLFWP 114
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A2V0NLL9_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NLL9_9CHLO) HSP 1 Score: 135 bits (339), Expect = 1.660e-37 Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 1
Query: 7 SIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPRQ 333
++ +F+ AGL EIGGGWL+WQ +R+ + WWI G +LA YGF+P P +A FGR +AVYGGVFIA+S AW + DG PD GD+AG AVAL GV + W++PR+
Sbjct: 29 TLGIFLFAGLAEIGGGWLVWQGMRKGRPWWWIVGGVAVLACYGFIPTLQPP---AASFGRVYAVYGGVFIALSYAWGAVLDGDRPDAGDWAGGAVALAGVVLAWFWPRR 134
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A518L6Y1_9BACT (UPF0060 membrane protein TBK1r_47860 n=1 Tax=Planctomycetes bacterium TBK1r TaxID=2527963 RepID=A0A518L6Y1_9BACT) HSP 1 Score: 131 bits (330), Expect = 1.970e-36 Identity = 59/109 (54.13%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 4 RSIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPR 330
RS+ +FVLAGLCEIGGGWL+WQ++RE K WW G ++L +YG ++P +A FGR +AVYGG FI +SL W FDG PD D GAA+ALVGV +M ++PR
Sbjct: 8 RSLILFVLAGLCEIGGGWLVWQSLREHKPAWWGVSGGVILMLYG-----VIPTLQTAHFGRIYAVYGGFFIVLSLLWGWYFDGDRPDRFDVIGAAIALVGVCVMMYWPR 111
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: UPI00058BF58C (YnfA family protein n=1 Tax=Tessaracoccus massiliensis TaxID=1522311 RepID=UPI00058BF58C) HSP 1 Score: 130 bits (327), Expect = 5.600e-36 Identity = 62/109 (56.88%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 4 RSIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPR 330
+SIA+FVLA L EIGG WL+WQ +RE K WWI G + L +YGFV A L PD A FGR A YGGVF+A SLAW + DGF PD D GAA+ LVGV ++ + PR
Sbjct: 5 KSIALFVLAALAEIGGAWLVWQGVREGKGAWWIGAGVIALGLYGFV-ATLQPD---ANFGRILAAYGGVFVAGSLAWGMVVDGFRPDRWDVIGAAICLVGVAVIMYAPR 109
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A7W7S3S4_9ACTN (UPF0060 membrane protein FHR32_007367 n=1 Tax=Streptosporangium album TaxID=47479 RepID=A0A7W7S3S4_9ACTN) HSP 1 Score: 128 bits (322), Expect = 3.010e-35 Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 1 VRSIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPR 330
VRS+ +FV+A L EIGG WLIWQ +RE + WWI G + L +YGFV A L PD A FGR A YGGVF+A SLAW + DGF PD D AGAA+ L+GV ++ + PR
Sbjct: 4 VRSLVLFVVAALAEIGGAWLIWQGVREHRGAWWIGAGIVALGLYGFV-ATLQPD---AGFGRILAAYGGVFVAGSLAWGMVADGFRPDRWDLAGAAICLIGVAVIMYAPR 109
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A7S1SWG8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SWG8_9CHLO) HSP 1 Score: 130 bits (326), Expect = 3.220e-35 Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 1
Query: 7 SIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPR 330
S+A+F+ A L EIGGGWL+WQA+RE K +WW G+L+L +YGF+P D EFGR +AVYGGVFI +S W + DG D GD+ G+ VA++GV I W++PR
Sbjct: 53 SLALFLAAALAEIGGGWLVWQAVREGKPSWWALLGSLVLVLYGFIPTWQPVD----EFGRTYAVYGGVFIVLSYLWGWLVDGMRMDAGDWIGSIVAVIGVAIAWFWPR 156
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A8J9SFG2_9CHLO (UPF0060 membrane protein YfjF n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SFG2_9CHLO) HSP 1 Score: 129 bits (324), Expect = 7.470e-35 Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 1 VRSIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPR 330
V +I +F+ AGLCEIGGGWL+WQA+RE K +W G+L+L YGF+P A ++ FGR +AVYGG FI +S AW +FD PD GDY GAA+AL+GV + +YPR
Sbjct: 59 VLAIFLFLAAGLCEIGGGWLVWQAVREGKPFYWGVAGSLVLVGYGFLPTA----QPTSNFGRIYAVYGGFFIVLSYAWGWVFDKERPDTGDYVGAAIALIGVIVALFYPR 164
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A835XSW3_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XSW3_9CHLO) HSP 1 Score: 129 bits (324), Expect = 8.150e-35 Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 7 SIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPR 330
++ VF+LAGL EIGGGWL+WQ IR KK +++ GA++L YGF+P L P+ A F R +AVYGGVFI MS +W + DG PD GD+ G+A+AL GV + W++PR
Sbjct: 62 TLGVFILAGLAEIGGGWLVWQTIRNKKPWYYMVCGAIVLVAYGFIPT-LQPE--GASFARVYAVYGGVFIVMSYSWGWVVDGDRPDTGDWVGSAIALAGVALAWFWPR 166
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Match: A0A150G6X1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G6X1_GONPE) HSP 1 Score: 127 bits (320), Expect = 9.770e-35 Identity = 58/109 (53.21%), Postives = 75/109 (68.81%), Query Frame = 1
Query: 7 SIAVFVLAGLCEIGGGWLIWQAIREKKTNWWIFPGALLLAVYGFVPAALLPDTSSAEFGRAFAVYGGVFIAMSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPRQ 333
++ VFVLAGL EIGGGWL+WQA+R KK ++ GAL+L YG +P L PD A F R +AVYGG+FI MS W DG PD GD+ G+A+AL GV + W++PR+
Sbjct: 21 TLGVFVLAGLAEIGGGWLVWQAVRNKKGWYYFVGGALVLVAYGVIPT-LQPD--GATFARVYAVYGGIFIVMSYGWGWAVDGDRPDRGDWVGSAIALAGVAVAWFWPRR 126 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31620.8528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31620.8528.1 >prot_H-paniculata_contig31620.8528.1 ID=prot_H-paniculata_contig31620.8528.1|Name=mRNA_H-paniculata_contig31620.8528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=39bp MSLAWARIFDGFAPDPGDYAGAAVALVGVGIMWWYPRQ*back to top mRNA from alignment at H-paniculata_contig31620:374..1685+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31620.8528.1 ID=mRNA_H-paniculata_contig31620.8528.1|Name=mRNA_H-paniculata_contig31620.8528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1312bp|location=Sequence derived from alignment at H-paniculata_contig31620:374..1685+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31620:374..1685+ >mRNA_H-paniculata_contig31620.8528.1 ID=mRNA_H-paniculata_contig31620.8528.1|Name=mRNA_H-paniculata_contig31620.8528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=234bp|location=Sequence derived from alignment at H-paniculata_contig31620:374..1685+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |