prot_H-paniculata_contig1132.850.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1132.850.1
Unique Nameprot_H-paniculata_contig1132.850.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length327
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: D8LJE0_ECTSI (Putative Del transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE0_ECTSI)

HSP 1 Score: 243 bits (619), Expect = 5.030e-69
Identity = 148/243 (60.91%), Postives = 167/243 (68.72%), Query Frame = 0 
Query:   83 FANYRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKLSEPEDVSNN 325
            +++Y RKDKSLGLLCGRFVEVY   QH + +        A   P     XXXXXXXXX         A  ++ D G+ E              +GM+ELD+AA ELGVARRRIYDVINILES+CVVTRARKNTYRWHGK N++ TLRQLQRT   VFPEEV +NGMTECLKQ+ L          +G  AVG LGGPR DG KEKSLGGLCRRFVQLFLVGNDVVSVGEAA KLSEP DV+ +
Sbjct:  394 YSSYCRKDKSLGLLCGRFVEVYGHSQHFRDR-------VAGGGPVXXXXXXXXXXXXX--------XAGGKKGDKGDGE--------------EGMIELDKAAAELGVARRRIYDVINILESVCVVTRARKNTYRWHGKKNLILTLRQLQRTATHVFPEEVAKNGMTECLKQAKL----------IGN-AVGSLGGPRADGTKEKSLGGLCRRFVQLFLVGNDVVSVGEAAEKLSEPSDVAGS 596
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A6H5L5C3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C3_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 4.280e-67
Identity = 141/243 (58.02%), Postives = 160/243 (65.84%), Query Frame = 0 
Query:   83 FANYRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKLSEPEDVSNN 325
            +++Y RKDKSLGLLCGRFVEVY   QH +      D+ A          XXXXX                   D G+ E              +GM+ELD+AA ELGVARRRIYDVINILES+CVVTRARKNTYRWHGK N++ TLRQLQRT   VFPEEV +NGMTECLKQ+ L          +G  A+G LGGPR DG KEKSLGGLCRRFVQLFLVGNDVVSVGEAA KLS+P DV+ +
Sbjct:  410 YSSYCRKDKSLGLLCGRFVEVYGHSQHFR------DRVAGGXXXXXXXXXXXXX------------XXXXXXGDKGDDE--------------EGMIELDKAAAELGVARRRIYDVINILESVCVVTRARKNTYRWHGKKNLILTLRQLQRTATHVFPEEVAKNGMTECLKQAKL----------IGN-AIGSLGGPRADGTKEKSLGGLCRRFVQLFLVGNDVVSVGEAAEKLSDPSDVAGS 609
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S3Q8J9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8J9_9STRA)

HSP 1 Score: 108 bits (271), Expect = 8.770e-23
Identity = 86/270 (31.85%), Postives = 117/270 (43.33%), Query Frame = 0 
Query:   86 YRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSS----LKPYSDSNSGGVGQQAV---GLLGGPRIDGQ--------------------------------KEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKL 316
            YRRKDKSLG+LC  F+  Y ++QH     E P  A                         P P  V+                            +D A+  L V RRRIYD+INILE++ VVTR  KNTY W G DN+  TLR++Q     +FP++VV NG+ E   + +     K  + + +GGVG   V   G       DG                                 KEKSLG L ++F+QLFLVGN+ +++ EA+ K+
Sbjct:   75 YRRKDKSLGVLCANFMRRYNKIQH-----EKPTDA-------------------------PHPPEVT----------------------------IDEASQSLMVERRRIYDIINILEAIEVVTRKGKNTYNWFGMDNINDTLRKMQTEAFTLFPQDVVFNGLHEVKLEEAEAAVAKVAAQAGNGGVGTVPVKEDGTKAEDEADGDSSSLPTGFAMLLASAEQVEAKKKKPKAKKGTSKEKSLGRLSQKFIQLFLVGNETITLEEASDKI 286
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S1B9K5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9K5_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.520e-21
Identity = 56/138 (40.58%), Postives = 87/138 (63.04%), Query Frame = 0 
Query:  179 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKL 316
            + +D AA  LGV RRRIYD+INILES+ +V R  KNTY W+GK+++   L +LQ+    ++PE+   NG+   L + S+   SD+ +              + +  K+KSLG L ++F+Q+FLVGN+V+S+ EA+ K+
Sbjct:   51 ISIDAAANALGVERRRIYDIINILESIEIVRRKCKNTYIWYGKEHLGYVLARLQQQAFTMWPEDAKTNGL---LSEGSIILNSDNKT--------------KTESNKDKSLGRLSQKFIQMFLVGNNVLSLAEASEKI 171
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S2QRQ0_9EUKA (Hypothetical protein n=1 Tax=Norrisiella sphaerica TaxID=552664 RepID=A0A7S2QRQ0_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 9.490e-16
Identity = 79/254 (31.10%), Postives = 113/254 (44.49%), Query Frame = 0 
Query:   76 RDEYSCKFANYRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGND-VVSVGEAAVKLSE-----PEDVS 323
            + +   K  NY RKDKSLGLLCGRF+++Y       +KE                                           G++                  + LD AA  LGV RRRIYD++NILES+ +V+R  KN Y WHG   + A L +++        +E  R+ M +C+   S    S+ N+G   +   G +   + D ++EKSLG L RRFVQ+F      VVS+ +A   L +     P+DVS
Sbjct:   31 KTQAKTKARNYSRKDKSLGLLCGRFLKLY------NNKE-------------------------------------------GKN------------------ICLDEAADTLGVERRRIYDIVNILESIEIVSRLGKNKYTWHGVKGLAAALSKIK--------DETDRS-MGKCVPDDSA---SNLNAGSSSRYKNGSI---KKDSRREKSLGLLSRRFVQMFFTSESRVVSLDQAGNALVDGKPATPKDVS 202
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S4NF84_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NF84_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.250e-15
Identity = 88/267 (32.96%), Postives = 120/267 (44.94%), Query Frame = 0 
Query:   86 YRRKDKSLGLLCGRFVEVYARVQHIQSKEENPDQAAATATPRKSRSXXXXXXXXXXXXXXPSPLAVSQESDVGESEXXXXXXXXXXXGGGQGMVELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGG----VGQQAVGLLGGPRIDGQK--------------------------------EKSLGGLCRRFVQLFLVGNDVVSVGEAAVKL 316
            Y RKDKSLGLLC +FVE Y             D AA  A    + +  XXXXXXXXX    S  AV QE+                   G+ +V +  AA  LGV RRRIYD+INILE++ VV+R  KNTY WHG + +  T  ++QR   L  P    +N    C+   +    +D           +  +  L   R++G K                                +KSLG L R+F+QLFLVG   +++ +A+ K+
Sbjct:  779 YNRKDKSLGLLCEKFVETYT------------DLAARGAAAAVANANAXXXXXXXXXGG--SDAAVLQEAGCTHEPD------------GRLLVSISSAARHLGVERRRIYDIINILEAIGVVSRKCKNTYWWHGLEGLEVTFGRMQRECVLGGPPGAKQNFSKVCVDTPAAAAAADLRDPKWREWAAENGIDKLVLKRLEGDKKGDNRSKFDADRRGDYNSSNDGSGVVAGTAVPQKSLGLLSRKFIQLFLVGYVNIALTDASEKI 1019
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A8C5DZC5_9TELE (E2F transcription factor 7 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5DZC5_9TELE)

HSP 1 Score: 87.8 bits (216), Expect = 1.950e-15
Identity = 59/149 (39.60%), Postives = 83/149 (55.70%), Query Frame = 0 
Query:  179 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGNDVVSVGEAAVKL--SEPEDVSNN 325
            + LD  A  LGV RRRIYD++N+LESL +V R  KN+Y WHG+  + A L++LQR G     EE     M   L Q S++P +  +    G+   G  GG R    K+KSL  + ++FV LFLV        +AA K+   E +D S++
Sbjct:  179 ISLDEVATSLGVERRRIYDIVNVLESLMIVGRMAKNSYIWHGRQRLEARLQELQRRGR----EEGYHRLME--LAQFSIRPTALVHEDDSGEGDTGNGGGNR----KDKSLRIMSQKFVMLFLVSKTQTVTLDAAAKILIEESQDSSSH 317
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A7S0CIQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIQ8_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.980e-15
Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 0 
Query:  179 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLF 300
            + +D AA  LGV RRRIYD+INILES+ VV R  KNTY W G D++     +LQ+    ++P++  +NG+ +  ++S   P  + +S                +G+K+K L  L +RF+QLF
Sbjct:   35 ISIDAAAASLGVERRRIYDIINILESIHVVRRKCKNTYTWRGTDHLPQVFAKLQKEAMKIWPDDARQNGIVDEDEKSVPSPGRNEDS-------------CNEEGEKKKILWRLSQRFIQLF 143
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A873AG86_9SALA (E2F transcription factor 7 n=1 Tax=Ambystoma andersoni TaxID=282260 RepID=A0A873AG86_9SALA)

HSP 1 Score: 87.4 bits (215), Expect = 2.110e-15
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 0 
Query:  179 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVV-----RNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGN-DVVSVGEAA-VKLSEPEDVSN 324
            + LD  A  LGV RRRIYD++N+LESL +V+R  KN Y WHG + +  TL++LQ  GAL   EE +     ++G  E       K + D  SG +   A         + +K+KSL  + ++FV LFLV   ++V++  AA + + E +DVS+
Sbjct:  137 ISLDEVAASLGVERRRIYDIVNVLESLHLVSRVAKNQYCWHGLNGLNQTLQRLQCLGALQKYEEQIAHFQHKDGDMEYRSGDRKKTFRDYQSGHLFDFAEADGHSAAANSRKDKSLRIMSQKFVMLFLVSTTNIVTLDIAAKILIDESQDVSD 289
[Close]
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Match: A0A873A8H8_AMBME (E2F transcription factor 7 n=1 Tax=Ambystoma mexicanum TaxID=8296 RepID=A0A873A8H8_AMBME)

HSP 1 Score: 87.4 bits (215), Expect = 2.790e-15
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 0 
Query:  179 VELDRAAIELGVARRRIYDVINILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVV-----RNGMTECLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLFLVGN-DVVSVGEAA-VKLSEPEDVSN 324
            + LD  A  LGV RRRIYD++N+LESL +V+R  KN Y WHG + +  TL++LQ  GAL   EE +     ++G  E       K + D  SG +   A         + +K+KSL  + ++FV LFLV   ++V++  AA + + E +DVS+
Sbjct:  168 ISLDEVAASLGVERRRIYDIVNVLESLHLVSRVAKNQYCWHGLNGLNQTLQRLQCLGALQKYEEQIAHFQHKDGDMEYRSGDRKKTFRDYQSGHLFDFAEADGHSAAANSRKDKSLRIMSQKFVMLFLVSTTNIVTLDIAAKILIEESQDVSD 320
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1132.850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJE0_ECTSI5.030e-6960.91Putative Del transcription factor (Partial) (Fragm... [more]
A0A6H5L5C3_9PHAE4.280e-6758.02Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S3Q8J9_9STRA8.770e-2331.85Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1B9K5_9STRA3.520e-2140.58Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2QRQ0_9EUKA9.490e-1631.10Hypothetical protein n=1 Tax=Norrisiella sphaerica... [more]
A0A7S4NF84_9STRA1.250e-1532.96Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A8C5DZC5_9TELE1.950e-1539.60E2F transcription factor 7 n=1 Tax=Gouania willden... [more]
A0A7S0CIQ8_9STRA1.980e-1537.70Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A873AG86_9SALA2.110e-1537.91E2F transcription factor 7 n=1 Tax=Ambystoma ander... [more]
A0A873A8H8_AMBME2.790e-1537.91E2F transcription factor 7 n=1 Tax=Ambystoma mexic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003316E2F/DP family, winged-helix DNA-binding domainSMARTSM01372E2F_TDP_2coord: 88..220
e-value: 6.2E-21
score: 85.5
IPR003316E2F/DP family, winged-helix DNA-binding domainPFAMPF02319E2F_TDPcoord: 89..220
e-value: 8.0E-16
score: 57.9
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 171..222
e-value: 6.9E-14
score: 53.1
NoneNo IPR availablePANTHERPTHR12081:SF7E2F-LIKE (MAMMALIAN TRANSCRIPTION FACTOR)coord: 177..316
IPR015633E2F FamilyPANTHERPTHR12081TRANSCRIPTION FACTOR E2Fcoord: 177..316
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 177..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1132contigH-paniculata_contig1132:25943..28828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1132.850.1mRNA_H-paniculata_contig1132.850.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1132 25943..28828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1132.850.1 ID=prot_H-paniculata_contig1132.850.1|Name=mRNA_H-paniculata_contig1132.850.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp
LDGAGQGVTPPAKLARGKVKGYDKDKDVNLRGCEQGAGTVGIATPRSMNL
AAGEAAAAGGLVSSSPEGAWGGDGSRDEYSCKFANYRRKDKSLGLLCGRF
VEVYARVQHIQSKEENPDQAAATATPRKSRSSPLSSRSSRSSRSSPSPLA
VSQESDVGESEGEGEGEGEGEKGGGQGMVELDRAAIELGVARRRIYDVIN
ILESLCVVTRARKNTYRWHGKDNMVATLRQLQRTGALVFPEEVVRNGMTE
CLKQSSLKPYSDSNSGGVGQQAVGLLGGPRIDGQKEKSLGGLCRRFVQLF
LVGNDVVSVGEAAVKLSEPEDVSNNL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003316E2F_WHTH_DNA-bd_dom
IPR036388WH-like_DNA-bd_sf
IPR015633E2F
IPR036390WH_DNA-bd_sf