prot_H-paniculata_contig315.8502.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig315.8502.1
Unique Name	prot_H-paniculata_contig315.8502.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	451

Homology

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BLAST of mRNA_H-paniculata_contig315.8502.1 vs. uniprot
Match: A0A6H5L6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z7_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 8.100e-98
Identity = 199/362 (54.97%), Postives = 238/362 (65.75%), Query Frame = 0

Query:    6 WGPGVSLITVSAWQSFVALCAGLVMSRAQRKSAWRRVA--EARPLVDAERTRRNRCLFVFAVAHLLGSALEYHSYGVVGSVAAEALRATETALFLALSLYFFRVHRRGLAALPTLLLAFGLALGAAPATGDLRVDGVGLEFSLAANFLLAVRAVTAKMAMDDYGVDEVSTVFSGIKMTAALQVVVLLTIEVPRAATGRSPCLLPHLWGVGMEEHEYAGAGSSTGVDHYAAADRGVLGGRGEGWVSGEERVKLTLLLVVNGLFLYGHVLALFALLSRLSSTAFAIVSGYVRAALVFVLLLSLKGSTTYPRSVGMLLSTIAVVVHFYRTYAGSSPRHKPSISMVGGGQSEV-----LKDGGESG 360
            WG GVS++TVSAWQ+  AL  G +MSR      WRR    E R L D ERTRRN+ L VFA AHL G+ LEYH YGV+G+ AAE LR+TE A F  LSL    + R GLA++PTLLLA GLAL A P  GDLR    GL  SLAAN LLAVRA+ AKMA+DDYG+DE+S +FSG  MTA LQ ++LL +EVPRAA G SP LLPHLWGVG+ E +    G        +    G+  G    W  G ER +L  LL+ NG+FLYGH+L LFALLSRLS+T FAI SGYV AALVFVLLL+L+GS   PR VGM L+T+AV  HFYR Y     R + + S++    +         DGGE+G
Sbjct:  344 WGKGVSVVTVSAWQTLAALGFGFLMSR-----FWRRFRRPEVRALSDGERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAACFCLLSLNV-GMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANILLAVRAIAAKMALDDYGLDEISALFSGATMTAGLQSLILLVVEVPRAAAGLSPRLLPHLWGVGVMEIDRQQPGGPV----LSGEGAGIGVGDAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAISSGYVHAALVFVLLLALRGSAAGPRMVGMSLATLAVSAHFYRAYV----RGRATSSLLNSADNADGLPCDADDGGEAG 691

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BLAST of mRNA_H-paniculata_contig315.8502.1 vs. uniprot
Match: D7G6G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G9_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.700e-90
Identity = 188/362 (51.93%), Postives = 226/362 (62.43%), Query Frame = 0

Query:    6 WGPGVSLITVSAWQSFVALCAGLVMSRAQRKSAWRRVA--EARPLVDAERTRRNRCLFVFAVAHLLGSALEYHSYGVVGSVAAEALRATETALFLALSLYFFRVHRRGLAALPTLLLAFGLALGAAPATGDLRVDGVGLEFSLAANFLLAVRAVTAKMAMDDYGVDEVSTVFSGIKMTAALQVVVLLTIEVPRAATGRSPCLLPHLWGVGMEEHEYAGAGSSTGVDHYAAADRGVLGGRGEGWVSGEERVKLTLLLVVNGLFLYGHVLALFALLSRLSSTAFAIVSGYVRAALVFVLLLSLKGSTTYPRSVGMLLSTIAVVVHFYRTYAGSSPRHKPSISMVGGGQSEV-----LKDGGESG 360
            WG GVS++TVSAWQ+  AL  G +MSR      WRR    E R L DAERTRRN+ L VFA AHL G+ LEYH YGV+G+ AAE LR+TE A F  LSL    + R GLA++PTLLLA GLAL A P  GDLR    GL  SLAAN LLAVRA+ AKMA+DDYG+DE+S +FSG KMTA LQ ++LL +EVPRAA G SP LLPHLWGVG+ E +    G        +    G+  G    W  G ER +L  LL+ NG+FLYGH+L LFALLSRLS+T FAI                 +GS   PR VGM L+T+AV  HFYR Y     R + + S++  G +         DGGE+G
Sbjct:  374 WGKGVSVVTVSAWQTLAALGVGFLMSR-----FWRRFRRPEVRALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAAFFCLLSLNV-GMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKMALDDYGLDEISALFSGAKMTAGLQCLILLVVEVPRAAAGLSPRLLPHLWGVGVMEIDQQQPGGPV----VSGEGAGIGVGEAGDWGEGRERARLACLLLANGVFLYGHLLVLFALLSRLSATMFAIS----------------RGSAAGPRIVGMSLATLAVSAHFYRAYV----RGRATSSLLNSGDNAEGLPCDADDGGEAG 705

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig315.8502.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig315.8502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L6Z7_9PHAE	8.100e-98	54.97	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G6G9_ECTSI	1.700e-90	51.93	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 84..105
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 32..58
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 112..133
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 139..157
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 106..111
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 303..313
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 134..138
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 255..277
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..31
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 314..331
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 59..78
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 332..451
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 283..302
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 158..254
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 79..83
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 278..282
None	No IPR available	TMHMM	TMhelix		coord: 10..32
None	No IPR available	TMHMM	TMhelix		coord: 255..277
None	No IPR available	TMHMM	TMhelix		coord: 282..304
None	No IPR available	TMHMM	TMhelix		coord: 88..105
None	No IPR available	TMHMM	TMhelix		coord: 59..78
None	No IPR available	TMHMM	TMhelix		coord: 139..158
None	No IPR available	TMHMM	TMhelix		coord: 112..129

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig315	contig	H-paniculata_contig315:5671..17059 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig315.8502.1	mRNA_H-paniculata_contig315.8502.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig315 5671..17059 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig315.8502.1 ID=prot_H-paniculata_contig315.8502.1|Name=mRNA_H-paniculata_contig315.8502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=451bp
MRGGVWGPGVSLITVSAWQSFVALCAGLVMSRAQRKSAWRRVAEARPLVD
AERTRRNRCLFVFAVAHLLGSALEYHSYGVVGSVAAEALRATETALFLAL
SLYFFRVHRRGLAALPTLLLAFGLALGAAPATGDLRVDGVGLEFSLAANF
LLAVRAVTAKMAMDDYGVDEVSTVFSGIKMTAALQVVVLLTIEVPRAATG
RSPCLLPHLWGVGMEEHEYAGAGSSTGVDHYAAADRGVLGGRGEGWVSGE
ERVKLTLLLVVNGLFLYGHVLALFALLSRLSSTAFAIVSGYVRAALVFVL
LLSLKGSTTYPRSVGMLLSTIAVVVHFYRTYAGSSPRHKPSISMVGGGQS
EVLKDGGESGQGKGSIIPLPQLRLFLREGSPAPASDSALGEGTMRGVDAS
PLSSGGRSSSGRREKQPQALFVPLLGTRHDVDGGAAGAVGLEGGRSVGGE
G