mRNA_H-paniculata_contig3144.8492.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: D7FXL2_ECTSI (Sexually induced protein 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXL2_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 1.240e-138 Identity = 178/205 (86.83%), Postives = 186/205 (90.73%), Query Frame = 1
Query: 7 VVLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAMTAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTILS 621
++ L T+ AYCPNSCSGHGSCGTNDQCTCYLRPNGD AW+GADCSLRTCPKGAAWA AVAAN+AHP+VECSAKGTCDR TGIC CFENYEGVACERT CPNDCSGNGFCFTEKQLAADAG TY TPWDAEKQVGCKCDAGFRGPDCSLQECPSG DVMGGDGS EGRDCSGRGICDYT+GLC CFLG+YGT CEYQTILS
Sbjct: 8 LLFFAALVGTSLAYCPNSCSGHGSCGTNDQCTCYLRPNGDVAWIGADCSLRTCPKGAAWAKEAVAANDAHPEVECSAKGTCDRATGICTCFENYEGVACERTICPNDCSGNGFCFTEKQLAADAGGTYNTPWDAEKQVGCKCDAGFRGPDCSLQECPSGADVMGGDGSIEGRDCSGRGICDYTTGLCGCFLGFYGTMCEYQTILS 212
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: A0A7S2BSV2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSV2_9STRA) HSP 1 Score: 331 bits (849), Expect = 1.730e-113 Identity = 145/203 (71.43%), Postives = 164/203 (80.79%), Query Frame = 1
Query: 10 VLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAMTAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTIL 618
+ L A AAYCPN CSGHGSCG+ND+CTCYLRPNGD AW DCSLRTCPK AAW A AAN AHP VECS KG+C+R TG C CF+NY+G+ACERT CP DCS +GFC+TEKQLAADA TY PWDA K VGC CD G+RGPDCSLQECPSG DV+ GDG+S+GRDCSGRGIC+Y +GLC CF GY+GTKC++QTIL
Sbjct: 9 ITLASFVAMGAAYCPNGCSGHGSCGSNDKCTCYLRPNGDAAWTSHDCSLRTCPKSAAWVAVATAANEAHPSVECSNKGSCNRKTGECDCFDNYDGIACERTVCPGDCSNHGFCYTEKQLAADASKTYTKPWDAMKHVGCVCDLGYRGPDCSLQECPSGVDVLKGDGNSKGRDCSGRGICNYGAGLCKCFTGYFGTKCQHQTIL 211
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: A0A7S2WLA1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLA1_9STRA) HSP 1 Score: 326 bits (835), Expect = 5.040e-111 Identity = 143/203 (70.44%), Postives = 161/203 (79.31%), Query Frame = 1
Query: 10 VLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAMTAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTIL 618
V L A AAAYCPN CSGHGSC ND+C CY RPNGD AW DCSLRTCPK AAW A AAN AHP+VECS KG C+R TG C CFENY+G+ACERT CPNDCSG G C+T+KQLAA+A TY PWDA K VGC CD G+RGPDCSL+ECPSG DV+ GDG+ +GRDCSGRGICDY++GLC CF GY+GTKC++QTIL
Sbjct: 31 VALAGFATLAAAYCPNGCSGHGSCSGNDKCVCYTRPNGDPAWTEHDCSLRTCPKAAAWVAVATAANEAHPEVECSNKGLCNRKTGECECFENYDGIACERTVCPNDCSGRGICYTQKQLAAEASMTYTEPWDAMKHVGCVCDLGYRGPDCSLEECPSGPDVLLGDGNEKGRDCSGRGICDYSTGLCKCFTGYFGTKCQHQTIL 233
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: A0A812W0K4_SYMMI (Tnc protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W0K4_SYMMI) HSP 1 Score: 314 bits (804), Expect = 1.110e-106 Identity = 145/205 (70.73%), Postives = 155/205 (75.61%), Query Frame = 1
Query: 4 KVVLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAMTAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTIL 618
KVV +A A AYCPN CSGHGSCGTND+CTCY R +G+ AW DCS RTCPK AAW ANNAHP VECS KG CDR TG C CFENYEG+ACERT CPN CS G CFTEKQLAA+A Y +PWDAEK VGC CD G RGPDCSL ECPSG DV+ G G+ GRDCSGRG+CDYT G CSCF GYYGTKCEYQTIL
Sbjct: 4 KVVTFLSIATAAVAYCPNGCSGHGSCGTNDKCTCYARIDGEAAWTFPDCSGRTCPKSAAWIGDVAGANNAHPVVECSNKGICDRETGECQCFENYEGIACERTVCPNSCSDAGVCFTEKQLAAEASRDYDSPWDAEKHVGCICDLGRRGPDCSLVECPSGADVLKGYGNEAGRDCSGRGLCDYTDGTCSCFHGYYGTKCEYQTIL 208
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: Q9Y0F6_THAWE (Sexually induced protein 3 n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q9Y0F6_THAWE) HSP 1 Score: 311 bits (797), Expect = 1.830e-105 Identity = 136/202 (67.33%), Postives = 161/202 (79.70%), Query Frame = 1
Query: 7 VVLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAW-AMTAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQ 609
+++L L AT AYCPN+CSGHGSCG ND+CTCYLRPNGD AW G DCS+RTCPKG AW A AV+ ++ HP +ECS KG CDR TG C+CFENY+G ACERT CPNDCSG G C +K LAA G+TY TPWDAEK +GCKCDAG+RGPDCS +ECPSGDD++G +G SEGRDCSGRG C+Y +GLC CF GY+G +C +
Sbjct: 5 LLVLATLLATVRAYCPNACSGHGSCGINDKCTCYLRPNGDPAWTGHDCSMRTCPKGNAWVAEEAVSLDDVHPRMECSNKGMCDRETGECVCFENYDGKACERTICPNDCSGRGICLPQKSLAALEGATYDTPWDAEKHLGCKCDAGYRGPDCSQKECPSGDDILGREGGSEGRDCSGRGKCNYVTGLCQCFTGYFGNRCHIR 206
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: B8CC41_THAPS (Sig3-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC41_THAPS) HSP 1 Score: 310 bits (795), Expect = 2.790e-105 Identity = 135/206 (65.53%), Postives = 164/206 (79.61%), Query Frame = 1
Query: 7 VVLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAM-TAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTILS 621
+V+L L ATA A+CPN C G+GSCG ND+CTCYLRPNGD AW DCS RTCP G+AW+ T AN+AHP ECS KGTCDR +G C+CFENY+G ACERT CPNDCSG G C T+K LA G+TY TPWDAEK +GCKCD G+RGPDCS +ECPSG+D++GGDG+ +GR+CSGRG C++ +GLC CF GY+G KC++QT+LS
Sbjct: 6 LVVLATLVATAGAHCPNGCKGNGSCGINDKCTCYLRPNGDPAWTAHDCSERTCPYGSAWSSETTNGANDAHPHAECSNKGTCDRNSGECVCFENYDGKACERTLCPNDCSGRGICLTQKALAIFQGATYETPWDAEKHLGCKCDVGYRGPDCSRKECPSGEDILGGDGAVKGRECSGRGNCNFITGLCQCFDGYFGNKCQHQTVLS 211
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: F0Y4Z3_AURAN (EGF-like domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4Z3_AURAN) HSP 1 Score: 308 bits (789), Expect = 4.410e-104 Identity = 134/194 (69.07%), Postives = 152/194 (78.35%), Query Frame = 1
Query: 40 AAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAMTAVAA-NNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTIL 618
AAYCPN CSGHGSCG++D+CTCYLRPN D AW ADCS RTCP AW VA NN H ECS G CDR +G C CF+ YEG+ACERT+CPNDCS G C+T+KQLA +A +TY TPWDA K VGC CD GFRGPDCSLQECPSG DV+ GDG+++GRDCSGRG+CDY SGLC CF GYYGTKC+ QT+L
Sbjct: 36 AAYCPNGCSGHGSCGSDDRCTCYLRPNNDSAWQAADCSERTCPMDLAWVKYPVAGENNVHESTECSNMGICDRKSGECECFDGYEGIACERTSCPNDCSARGICYTQKQLATEAATTYDTPWDAMKHVGCVCDLGFRGPDCSLQECPSGTDVLSGDGNTKGRDCSGRGLCDYDSGLCKCFSGYYGTKCQQQTVL 229
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: C4B7Q8_OCHDN (Tubular mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=C4B7Q8_OCHDN) HSP 1 Score: 306 bits (785), Expect = 8.680e-104 Identity = 138/204 (67.65%), Postives = 156/204 (76.47%), Query Frame = 1
Query: 7 VVLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAMTAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTIL 618
++LL L A A A CPN C+GHGSCG ND+CTCY R +G+ AW ADCS RTCPK +AW AN+AHP VECS KG CDR TG C CF NY+G+ACER CPN CS G CFT+KQLA DA TY TPWDAEK+VGC CD G RGPDCSL ECPSG DV+ G GS GRDCSGRG+CDY+SG+C+CF GYYGTKCEYQT+L
Sbjct: 5 ILLLAFLLAVAQAACPNGCNGHGSCGANDKCTCYTRIDGEPAWTYADCSGRTCPKSSAWVGDVQNANDAHPVVECSNKGVCDRKTGECKCFANYDGIACERPICPNKCSDAGVCFTQKQLAVDAARTYATPWDAEKEVGCVCDLGRRGPDCSLFECPSGPDVLKGFGSEAGRDCSGRGLCDYSSGICNCFHGYYGTKCEYQTVL 208
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: A0A7S0SS37_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SS37_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.240e-99 Identity = 130/190 (68.42%), Postives = 148/190 (77.89%), Query Frame = 1
Query: 49 CPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAMTAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAGSTYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTIL 618
CPN CSGHGSCG+ND+CTCY R +GD AW ADCS RTCPK AW N+AHP ECS KGTCDR TG C+C+ NY+G+AC+RT CPN CS +G CFTE QLA++AG TY TPWDA K VGC CD G RGPDCSL ECPSG DV+GG G+ GRDCSGRGICDY+SG+C CF GYYG +CEYQT+L
Sbjct: 22 CPNGCSGHGSCGSNDKCTCYTRIDGDPAWTYADCSGRTCPKAIAWVGEVSNTNDAHPLTECSNKGTCDRKTGQCICYPNYDGIACDRTICPNRCSESGVCFTEYQLASEAGRTYSTPWDANKYVGCVCDLGRRGPDCSLLECPSGADVLGGYGNETGRDCSGRGICDYSSGICGCFHGYYGHRCEYQTVL 211
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Match: A0A7S2NU76_9STRA (Hypothetical protein n=2 Tax=Coscinodiscophyceae TaxID=33836 RepID=A0A7S2NU76_9STRA) HSP 1 Score: 290 bits (741), Expect = 2.450e-96 Identity = 126/205 (61.46%), Postives = 153/205 (74.63%), Query Frame = 1
Query: 7 VVLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCSLRTCPKGAAWAMTAVAANNAHPDVECSAKGTCDRLTGICMCFENYEGVACERTTCPNDCSGNGFCFTEKQLAADAG-STYLTPWDAEKQVGCKCDAGFRGPDCSLQECPSGDDVMGGDGSSEGRDCSGRGICDYTSGLCSCFLGYYGTKCEYQTIL 618
V +L A+ AYCPN CSGHGSCG ND+CTCYL PN + AW DCS RTCP G AW V+ ++AHP VECS KGTCDR TG C CF NY G ACERT CPN+C G+G C TE LA D G ++Y+ PWD++K VGCKCD G+RG DC+ +ECPSG DV+GG G++EGR+CSGRG+C+Y GLC CF GYYG +C++QT+L
Sbjct: 55 VFVLATFASNCQAYCPNGCSGHGSCGVNDKCTCYLDPNNNPAWTEHDCSKRTCPLGTAWVGEPVSEDDAHPLVECSNKGTCDRATGDCKCFPNYGGKACERTLCPNNCGGHGICMTESALAHDHGEASYVLPWDSQKHVGCKCDVGYRGVDCTEKECPSGPDVLGGQGATEGRECSGRGLCNYGDGLCKCFTGYYGNRCQHQTVL 259 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3144.8492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3144.8492.1 >prot_H-paniculata_contig3144.8492.1 ID=prot_H-paniculata_contig3144.8492.1|Name=mRNA_H-paniculata_contig3144.8492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp MKVVLLGVLAATAAAYCPNSCSGHGSCGTNDQCTCYLRPNGDDAWMGADCback to top mRNA from alignment at H-paniculata_contig3144:11691..14663+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3144.8492.1 ID=mRNA_H-paniculata_contig3144.8492.1|Name=mRNA_H-paniculata_contig3144.8492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2973bp|location=Sequence derived from alignment at H-paniculata_contig3144:11691..14663+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3144:11691..14663+ >mRNA_H-paniculata_contig3144.8492.1 ID=mRNA_H-paniculata_contig3144.8492.1|Name=mRNA_H-paniculata_contig3144.8492.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig3144:11691..14663+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |