mRNA_H-paniculata_contig1132.849.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: A0A6H5L3V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V8_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.710e-47 Identity = 128/313 (40.89%), Postives = 166/313 (53.04%), Query Frame = 2 Query: 119 MAEWMGVEFTSWLLIAGAVALVLLVTWKPTHPQPRHGAGGRGGGSETMSSGTIVKTAQKLAPVSTEALAVAKRLGLNLG------KKRVPVTVLVNNVVLRHAGD-DWSVIEEALRVVSLLNEVACVFLIACVTSDEAEEKVKDIARSSGLVKPCGEN----------RGTSTPDHRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELIRIDPKSFGGDLDHGEASVVGDWG--SRSTSSSKGADCLEWREYKSLAAAAGLPFSHTESGQAASEIAAV--GQEVTLPPDVLAPLPQAGAGMTDK 994 M +WMG++ WL++A + LVLLV + + G S + + P S A V KRLG+ ++RVPVTV VN+VVLR D DW IE A+RV++LLNEVA VFL+A V SD E VKDIA SSGL P G + T P+HRLLFCS+ +GQ+A+VRQL SLHIGG +AL++ + RFVP L+RIDP + +D + V + T G LEWRE+KSLAAAAGL + Q A A+ G E + P Q A T+K Sbjct: 1 MTKWMGLDVPFWLIVAVGLGLVLLVIVQAP-------SSSNSGSRHPNRSAKNKRGKAEEPPASDAARGVGKRLGIGGAVRAGGSRRRVPVTVCVNDVVLRKGPDGDWVAIESAVRVLALLNEVASVFLVAWVQSDLDESLVKDIALSSGLTGPSGRDTSDPSAALTANATGIPEHRLLFCSSHIGQVAVVRQLTPSLHIGGPIALLEGICRFVPSLLRIDPSA----VDPPPETTVSPTAPSEKETGRRDGGYALEWREFKSLAAAAGLESAAGGEAQGAGSSASCSSGAESDIAAVAGGPREQGAADDTEK 302
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: D8LJE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE1_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.060e-34 Identity = 96/216 (44.44%), Postives = 120/216 (55.56%), Query Frame = 2 Query: 392 VVLRHAGD-DWSVIEEALRVVSLLNEVACVFLIACVTSDEAEEKVKDIARSSGLVKPCGEN----------RGTSTPDHRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELIRIDPKSFGGDLDHGEASVVGDWGSRSTSSSKGADCLEWREYKSLAAAAGLPFSHTESGQAASEIAAVGQEVTLPPDVLA----PLPQAGAGMTDK 994 VVLR D DW IE A+RV+ LLNEVA VFL+A V SD E VKDIA SSGL P G + T P+HRLLFCS+ +GQ+A+VRQL SLHIGG +AL++ + RFVP L+RIDP + + + + T G LEWRE++SLAAAAGL + Q A A+ P D+ A P Q A T+K Sbjct: 3 VVLRKGRDGDWVAIESAVRVLVLLNEVASVFLVAWVQSDLDESLVKDIALSSGLTGPSGRDTSGPSATVAANATGIPEHRLLFCSSHIGQVAVVRQLTPSLHIGGPIALLEGICRFVPSLLRIDPSAVEPPPEATASPAAPP--EKETGRRDGGYALEWREFRSLAAAAGLESATGGEAQGAGSSASCSSGAKQP-DIAAMAGGPCEQGAADDTEK 215
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: A0A7S2FF64_9CHLO (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2FF64_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 3.690e-9 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 479 FLIACVTSDEAEEKVKDIARSSGLVKPCGENRGTSTPDHRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELIRI 727 FLI V SD A+E + +SSG+ GT+ P HR LFC TDVG+ ALVRQL +H+ +A + L+RF+P + + Sbjct: 77 FLITHVDSDAAQESAQKSLKSSGIS-------GTAIPPHRCLFCDTDVGRTALVRQLEPDVHVDAGLASVTELARFLPRVAHV 152
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: A0A830HPU0_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HPU0_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 1.060e-8 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 479 FLIACVTSDEAEEKVKDIARSSGLVKPCGENRGTSTPDHRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELIRI 727 FLI V SD A+E + +SSG+ GT+ P HR LFC TDVG+ ALVRQL +H+ +A + L+RF+P + + Sbjct: 136 FLITHVDSDAAQESAQKSLKSSGIS-------GTAIPPHRCLFCDTDVGRTALVRQLEPDVHVDAGLASVTELARFLPRVAHV 211
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: L1I4I7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I4I7_GUITC) HSP 1 Score: 60.5 bits (145), Expect = 9.210e-7 Identity = 36/112 (32.14%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 386 NNVVLRHAGDDWSVIEEALRVVSLLNEVACVFLIACVTSDEAEEKVKDIARSSGLVKPCGENRGTSTPDHRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELI 721 N++ L+ G +++ E R L ++I VTSDE E KV D +G+ + G S H++LFC T++G+ A+VRQ+ LH+ + +++SL F+P L+ Sbjct: 59 NSIALK--GSSLAILLEMARTCDL-------YVITQVTSDEVENKVVDALEQAGVF-----DAGLSP--HKVLFCETELGRAAMVRQIEPMLHVESSAVVLESLKPFIPNLV 154
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: A0A7S4PM91_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PM91_GUITH) HSP 1 Score: 60.5 bits (145), Expect = 1.620e-6 Identity = 36/112 (32.14%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 386 NNVVLRHAGDDWSVIEEALRVVSLLNEVACVFLIACVTSDEAEEKVKDIARSSGLVKPCGENRGTSTPDHRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELI 721 N++ L+ G +++ E R L ++I VTSDE E KV D +G+ + G S H++LFC T++G+ A+VRQ+ LH+ + +++SL F+P L+ Sbjct: 96 NSIALK--GSSLAILLEMARTCDL-------YVITQVTSDEVENKVVDALEQAGVF-----DAGLSP--HKVLFCETELGRAAMVRQIEPMLHVESSAVVLESLKPFIPNLV 191
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: A0A2P4X901_9STRA (Mitochondrial protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X901_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 6.350e-6 Identity = 48/168 (28.57%), Postives = 84/168 (50.00%), Query Frame = 2 Query: 287 AQKLAPVSTEALAVAKR------LGLNLGKKRVPVTV----------LVNNVVLRHAGDDWSVIEEALRVVSLLNEVACVFLIACVTSDEAEEKVKDIARSSGLVKPCGENRGTSTPD---HRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELIRIDP 733 A ++AP ++ ALA A GLN + R+ T+ + N VL+ W+ +E +V+ L+ VA V+L+ V + +K++ I R P ++ GT+T H++LFC+T +G+IA VRQ+ +H+ ++ L + VP ++ I P Sbjct: 50 AARMAPSTSAALASAPERAAIATAGLNDRQLRLHFTLPMRSGARTITISGNAVLKTDTLAWTN-DEVPTLVADLSHVADVYLLCTVKDAKDTDKMQRI-REFVTTHPDLKSNGTATGGIKAHKILFCTTSIGEIAFVRQIEPQIHVEVDAGIVRDLEKHVPRIVHIPP 215
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: A0A250WWR4_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWR4_9CHLO) HSP 1 Score: 58.5 bits (140), Expect = 1.050e-5 Identity = 29/84 (34.52%), Postives = 46/84 (54.76%), Query Frame = 2 Query: 476 VFLIACVTSDEAEEKVKDIARSSGLVKPCGENRGTSTPDHRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELIRI 727 V+LI+ V+ D E + S G+ + P HR+LFCST G++A+VRQL LH+ + ++ L RF+P L ++ Sbjct: 147 VYLISMVSDDIGEALISGALESEGVSSASTQFAEGMVPSHRVLFCSTLEGKVAIVRQLEPDLHVDSLDSTVEGLQRFIPALWQV 230
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Match: A0A7S2RT15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT15_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 5.620e-5 Identity = 49/216 (22.69%), Postives = 97/216 (44.91%), Query Frame = 2 Query: 113 LAMAEWMGVEFTSWLLIAGAVALVLLVTWKPTHPQPRHGAGGRGGGSETMSSGTIVKTAQKLAPVSTEALAVAKRLGLNLGKKRVPVTVLVNNVVL--RHAG-----DDWSVIEEALRVVSLLNEVACVFLIACVTSDEAEEKVKDIARSSGLVKPCGENRGTSTPDHRLLFCSTDVGQIALVRQLRVSLHIGGTVALMDSLSRFVPELIRIDPKS 739 L+ A +G+ + + A LL W+P+ IV T++K V+ A + ++L + + VT+ ++ +++ R G ++ + +R + L EVA V ++ V ++ D SGL G + H+++F ST+ G++A+VRQLR +LH+ + + +L+R +P+L+ + S Sbjct: 7 LSGARMLGLSPLQLVSLLALAAFTLLFWWRPS----------------------IVSTSKKKREVTAAARRLVEKLRIAPERPEQLVTLALDQLLVTKRQGGSGANEENLKFSPKVIRTIRTLIEVADVVVMLPVKDMAERRELADAVALSGLTLSPEAPAGIAL--HKVVFYSTEAGKVAIVRQLRPTLHVDTSATTITALARHIPDLLLLSTTS 198 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1132.849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1132.849.1 >prot_H-paniculata_contig1132.849.1 ID=prot_H-paniculata_contig1132.849.1|Name=mRNA_H-paniculata_contig1132.849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=324bp MAEWMGVEFTSWLLIAGAVALVLLVTWKPTHPQPRHGAGGRGGGSETMSSback to top mRNA from alignment at H-paniculata_contig1132:15773..21743- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1132.849.1 ID=mRNA_H-paniculata_contig1132.849.1|Name=mRNA_H-paniculata_contig1132.849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5971bp|location=Sequence derived from alignment at H-paniculata_contig1132:15773..21743- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1132:15773..21743- >mRNA_H-paniculata_contig1132.849.1 ID=mRNA_H-paniculata_contig1132.849.1|Name=mRNA_H-paniculata_contig1132.849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1944bp|location=Sequence derived from alignment at H-paniculata_contig1132:15773..21743- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |