mRNA_H-paniculata_contig3139.8478.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3139.8478.1
Unique NamemRNA_H-paniculata_contig3139.8478.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: D7G4C7_ECTSI (ATP/GTP binding protein-like 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4C7_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 1.510e-80
Identity = 123/152 (80.92%), Postives = 142/152 (93.42%), Query Frame = 1 
Query:    1 VLCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYI 456
            ++ SLERL LPFL+REALCRTLQQRRV+LLTITAP+G+PG RPLR+RKWVF+SARVHPGETP+QFI+HGVI++LTG S RARALR N VFKIVPMLNPDGVV+GNYRCSYLGFDLNRHWLDP+AW QPEILS+K LV +LHEDP+V+LDFY+
Sbjct:  199 MMASLERLKLPFLQREALCRTLQQRRVDLLTITAPEGEPGTRPLRERKWVFMSARVHPGETPAQFIIHGVIDFLTGESPRARALRGNVVFKIVPMLNPDGVVNGNYRCSYLGFDLNRHWLDPTAWAQPEILSVKTLVAELHEDPSVDLDFYV 350
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: UPI001C4AA896 (cytosolic carboxypeptidase 6 n=3 Tax=Percomorphaceae TaxID=1489872 RepID=UPI001C4AA896)

HSP 1 Score: 197 bits (502), Expect = 5.840e-55
Identity = 96/167 (57.49%), Postives = 124/167 (74.25%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGN 504
            L SLER  LP+L+RE L  ++QQRR++LLTIT PD      P R++K VF++ARVHPGE+P+ FI  GVI++L      A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q+++DP V+L+FYID+HAHS   N FMYGN
Sbjct:   94 LASLERRNLPYLQREQLGLSVQQRRLDLLTITNPDH---LSPEREKKLVFLTARVHPGESPASFICQGVIDFLVSQHPVAQVLRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIVQMNQDPRVSLEFYIDVHAHSTMLNGFMYGN 257
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: A0A1A8A8V9_NOTFU (ATP/GTP binding protein-like 4 n=2 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A8A8V9_NOTFU)

HSP 1 Score: 197 bits (502), Expect = 4.080e-54
Identity = 95/173 (54.91%), Postives = 127/173 (73.41%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGNNISPRE 522
            L SLER  LP+L+RE L  ++QQRR++LLTIT P+      P +++K VF++ARVHPGE+P+ F+  GVI++L G    A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q+++DP V+L+FYID+HAHS   N FMYGN    +E
Sbjct:  178 LASLERRNLPYLQREQLGLSVQQRRLDLLTITNPEN---VSPEKEKKLVFLTARVHPGESPASFVCQGVIDFLVGQHPVAQILRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIVQMNQDPMVSLEFYIDVHAHSTMLNGFMYGNVFEDKE 347
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: UPI0003EC666E (cytosolic carboxypeptidase 6-like n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=UPI0003EC666E)

HSP 1 Score: 191 bits (485), Expect = 7.220e-54
Identity = 93/167 (55.69%), Postives = 122/167 (73.05%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGN 504
            L SLER  LP+L+RE L  ++QQRR++LLTIT  D     R   ++K VF++ARVHPGE+P+ F+  GVI++L      A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q+++DP V+L+FYID+HAHS   N FMYGN
Sbjct:   58 LASLERRNLPYLQREQLGLSVQQRRLDLLTITNSDRMSAER---EKKLVFLTARVHPGESPASFVCQGVIDFLVSQHPVAQILRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIVQMNQDPRVSLEFYIDVHAHSTMLNGFMYGN 221
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BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: UPI000B907D3C (cytosolic carboxypeptidase 6-like n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=UPI000B907D3C)

HSP 1 Score: 193 bits (491), Expect = 1.080e-53
Identity = 94/167 (56.29%), Postives = 123/167 (73.65%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGN 504
            L SLER  LP+L+RE L  ++QQRR++LLTIT  D      P R++K VF++ARVHPGE+P+ F+  GVI++L      A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q+++DP V+L+FYID+HAHS   N FMYGN
Sbjct:   65 LASLERRNLPYLQREQLGLSVQQRRLDLLTITNSDRQC---PEREKKLVFLTARVHPGESPASFVCQGVIDFLVSQHPVAQILRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIVQMNQDPRVSLEFYIDVHAHSTMLNGFMYGN 228
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: A0A8C2GFT2_CYPCA (BEN domain containing 5 n=3 Tax=Cyprininae TaxID=2743694 RepID=A0A8C2GFT2_CYPCA)

HSP 1 Score: 192 bits (489), Expect = 2.890e-53
Identity = 93/167 (55.69%), Postives = 123/167 (73.65%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGN 504
            L SLER  L +L+RE L  ++QQRR++LLTIT P+        R+++ VF++ARVHPGE+P+ FI HGVI++L      A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q+++DP V+L+FYID+HAHS   N FMYGN
Sbjct:   82 LASLERRNLDYLQREQLGLSVQQRRLDLLTITNPE--------REKRVVFLTARVHPGESPASFICHGVIDFLVSQHPIAQVLRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIVQMNQDPKVSLEFYIDVHAHSTMMNGFMYGN 240
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: A0A8D3A228_SCOMX (ATP/GTP binding protein like 4 n=2 Tax=Acanthomorphata TaxID=123368 RepID=A0A8D3A228_SCOMX)

HSP 1 Score: 195 bits (495), Expect = 4.040e-53
Identity = 96/173 (55.49%), Postives = 124/173 (71.68%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGNNISPRE 522
            L SLER  LP+L+RE L  ++QQRR++LLTIT  D      P R++K VF++ARVHPGE+P+ FI  GVI++L      A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q+++DP V+L+FYID+HAHS   N FMYGN     E
Sbjct:  178 LASLERRNLPYLQREQLGLSVQQRRLDLLTITNSDYPS---PEREKKLVFLTARVHPGESPASFICQGVIDFLVSQHPVAQVLRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIMQMNQDPRVSLEFYIDVHAHSTMLNGFMYGNGFEDEE 347
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: A0A8D3A237_SCOMX (ATP/GTP binding protein like 4 n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A8D3A237_SCOMX)

HSP 1 Score: 195 bits (495), Expect = 5.310e-53
Identity = 96/173 (55.49%), Postives = 124/173 (71.68%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGNNISPRE 522
            L SLER  LP+L+RE L  ++QQRR++LLTIT  D      P R++K VF++ARVHPGE+P+ FI  GVI++L      A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q+++DP V+L+FYID+HAHS   N FMYGN     E
Sbjct:  191 LASLERRNLPYLQREQLGLSVQQRRLDLLTITNSDYPS---PEREKKLVFLTARVHPGESPASFICQGVIDFLVSQHPVAQVLRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIMQMNQDPRVSLEFYIDVHAHSTMLNGFMYGNGFEDEE 360
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: A0A1A8S2D1_9TELE (ATP/GTP binding protein-like 4 n=2 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8S2D1_9TELE)

HSP 1 Score: 194 bits (494), Expect = 8.720e-53
Identity = 94/173 (54.34%), Postives = 126/173 (72.83%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGNNISPRE 522
            L SLER  LP+L+RE L  ++QQRR++LLTIT  +      P +++K VF++ARVHPGE+P+ F+  GVI++L G    A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q+++DP V+L+FYID+HAHS   N FMYGN    +E
Sbjct:  178 LASLERRNLPYLQREQLGLSVQQRRLDLLTITNSEN---VSPEKEKKLVFLTARVHPGESPASFVCQGVIDFLVGQHPVAQILRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIVQMNQDPMVSLEFYIDVHAHSTMLNGFMYGNVFEDKE 347
[Close]
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Match: A0A3P9KYB3_ORYLA (ATP/GTP binding protein-like 4 n=6 Tax=Ovalentaria TaxID=1489908 RepID=A0A3P9KYB3_ORYLA)

HSP 1 Score: 194 bits (492), Expect = 2.030e-52
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 1 
Query:    4 LCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWVFISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDGVVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDFYIDIHAHSVGTNSFMYGN 504
            L SLER  LP+LRRE L  ++QQRR++LLTIT  D      P +++K VF++ARVHPGE+P+ FI  GVI++L      A+ LR + +FKIVPMLNPDGV  GNYRCS +GFDLNRHW DPS W  P + ++K L+ Q++ DP V+L+FYID+HAHS   N FMYGN
Sbjct:  205 LASLERKHLPYLRREQLGLSVQQRRLDLLTITNSDH---LSPEKEKKLVFLTARVHPGESPASFICQGVIDFLVSQHPVAQILRDHVIFKIVPMLNPDGVYLGNYRCSLMGFDLNRHWQDPSPWAHPTLHAVKQLIVQMNHDPRVSLEFYIDVHAHSTMLNGFMYGN 368
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3139.8478.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4C7_ECTSI1.510e-8080.92ATP/GTP binding protein-like 4 n=1 Tax=Ectocarpus ... [more]
UPI001C4AA8965.840e-5557.49cytosolic carboxypeptidase 6 n=3 Tax=Percomorphace... [more]
A0A1A8A8V9_NOTFU4.080e-5454.91ATP/GTP binding protein-like 4 n=2 Tax=Nothobranch... [more]
UPI0003EC666E7.220e-5455.69cytosolic carboxypeptidase 6-like n=1 Tax=Neolampr... [more]
UPI000B907D3C1.080e-5356.29cytosolic carboxypeptidase 6-like n=1 Tax=Acanthoc... [more]
A0A8C2GFT2_CYPCA2.890e-5355.69BEN domain containing 5 n=3 Tax=Cyprininae TaxID=2... [more]
A0A8D3A228_SCOMX4.040e-5355.49ATP/GTP binding protein like 4 n=2 Tax=Acanthomorp... [more]
A0A8D3A237_SCOMX5.310e-5355.49ATP/GTP binding protein like 4 n=3 Tax=Percomorpha... [more]
A0A1A8S2D1_9TELE8.720e-5354.34ATP/GTP binding protein-like 4 n=2 Tax=Nothobranch... [more]
A0A3P9KYB3_ORYLA2.030e-5256.89ATP/GTP binding protein-like 4 n=6 Tax=Ovalentaria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3139contigH-paniculata_contig3139:2600..6870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score267.3
Seed ortholog evalue1.3e-68
Seed eggNOG ortholog2880.D7G4C7
Preferred nameAGBL4
KEGG koko:K05840
KEGG Pathwayko04020,ko04024,ko04080,ko04728,map04020,map04024,map04080,map04728
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005929,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006952,GO:0007610,GO:0008092,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0012505,GO:0015630,GO:0015631,GO:0016787,GO:0018193,GO:0018200,GO:0018410,GO:0018991,GO:0019098,GO:0019538,GO:0022414,GO:0032501,GO:0032504,GO:0035608,GO:0035609,GO:0035610,GO:0036064,GO:0036211,GO:0042995,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0048609,GO:0050896,GO:0051607,GO:0051704,GO:0051707,GO:0070011,GO:0071704,GO:0098542,GO:0120025,GO:0120038,GO:0140096,GO:1901564
EggNOG free text desc.protein deglutamylation
EggNOG OGsCOG2866@1,KOG3641@2759
Ec32 ortholog descriptionPeptidase M14, carboxypeptidase A
Ec32 orthologEc-00_007300.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04030
Exons6
Model size1398
Cds size1398
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3139.8478.1prot_H-paniculata_contig3139.8478.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3139 2600..6870 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929967.2772572-CDS-H-paniculata_contig3139:2599..26631622929967.2772572-CDS-H-paniculata_contig3139:2599..2663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 2600..2663 -
1691481090.4708896-CDS-H-paniculata_contig3139:2599..26631691481090.4708896-CDS-H-paniculata_contig3139:2599..2663Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 2600..2663 -
1622929967.2972302-CDS-H-paniculata_contig3139:3182..33301622929967.2972302-CDS-H-paniculata_contig3139:3182..3330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 3183..3330 -
1691481090.4806936-CDS-H-paniculata_contig3139:3182..33301691481090.4806936-CDS-H-paniculata_contig3139:3182..3330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 3183..3330 -
1622929967.3214793-CDS-H-paniculata_contig3139:4209..49381622929967.3214793-CDS-H-paniculata_contig3139:4209..4938Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 4210..4938 -
1691481090.4881701-CDS-H-paniculata_contig3139:4209..49381691481090.4881701-CDS-H-paniculata_contig3139:4209..4938Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 4210..4938 -
1622929967.3344712-CDS-H-paniculata_contig3139:5503..56621622929967.3344712-CDS-H-paniculata_contig3139:5503..5662Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 5504..5662 -
1691481090.496057-CDS-H-paniculata_contig3139:5503..56621691481090.496057-CDS-H-paniculata_contig3139:5503..5662Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 5504..5662 -
1622929967.3576012-CDS-H-paniculata_contig3139:5919..60531622929967.3576012-CDS-H-paniculata_contig3139:5919..6053Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 5920..6053 -
1691481090.5036702-CDS-H-paniculata_contig3139:5919..60531691481090.5036702-CDS-H-paniculata_contig3139:5919..6053Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 5920..6053 -
1622929967.3771403-CDS-H-paniculata_contig3139:6706..68701622929967.3771403-CDS-H-paniculata_contig3139:6706..6870Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 6707..6870 -
1691481090.51115-CDS-H-paniculata_contig3139:6706..68701691481090.51115-CDS-H-paniculata_contig3139:6706..6870Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3139 6707..6870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3139.8478.1

>prot_H-paniculata_contig3139.8478.1 ID=prot_H-paniculata_contig3139.8478.1|Name=mRNA_H-paniculata_contig3139.8478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=466bp
VLCSLERLALPFLRREALCRTLQQRRVELLTITAPDGDPGARPLRDRKWV
FISARVHPGETPSQFIVHGVINYLTGGSRRARALRANTVFKIVPMLNPDG
VVHGNYRCSYLGFDLNRHWLDPSAWGQPEILSLKNLVTQLHEDPNVNLDF
YIDIHAHSVGTNSFMYGNNISPRESSSQARQRQSGVAETNEAGVRPCLIS
SPQQQQQQQQQQQQHREEELSGLNNEPTRETEAPKTTPKAPASPQPRHPS
HASPADTASTHIPETTNPRGENTIRYEPKPLTQGQHSPLPGLKLPTPKLP
NSNDDATLDCIQGCAEEVRNAASCTGSSRRCTEVRGGAGGGGQSNPDSSS
VWETEEGDGEGAEQLRMGVQTIFPRMLAAKAPDFSFARSRFDADPSKEGT
GRRELGKLLSPDVLCFTLEVSFYASHREHVGLVPYTRAGYVELGRSLGST
FADYYGLDVADDRAL*
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mRNA from alignment at H-paniculata_contig3139:2600..6870-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3139.8478.1 ID=mRNA_H-paniculata_contig3139.8478.1|Name=mRNA_H-paniculata_contig3139.8478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4271bp|location=Sequence derived from alignment at H-paniculata_contig3139:2600..6870- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCTTATGCAGCCTCGAGCGCCTAGCCTTGCCCTTCCTTCGACGGGAGGC
CTTGTGTCGAACGTTACAGCAACGACGGGTAGAACTACTCACGATCACCG
CACCGGATGGAGATCCGGGGGCCCGACCGTTGCGAGATCGGAAGTGGGTG
TTTATCTCCGCAAGGTAAGTATGTATATCCATTTTTGCGAGTACATTGTT
TCTCGCGTCTAGCCGAATGACTCTGTGGTCGCAGGAAGCGCGTATGTTCC
TCAACCATTCGTGTTCTCAGAGAAATAGAACTATGTATTTTGAGGCATCA
ACAATCAAACGCACAGCAGTTATACTCCATACCCTAACCTTGCTGTCTAC
AATAATCCCCACGTGCATATATCAGATATCTTGTGCATTGAACGATGCTA
CTTTAGTCTCGGCAGGTTCCCGGGGTAATCTCGAACGGATTTCGGTCAGG
ATTATGTTTCCTCACTGACAGAATGTAACGGCCAGCGTTGACAAATAGGA
TAAAACCTGATCAGAGAGCTTTGTTAAAAGGTGATTACTGCTCATTGCGC
CTTGTCGGGTCGCGTGGTACACAAAACGTGTCGAACTGGAGCCAAGCCCC
TTTGGATAGCAATGGAATATTATTCCAGTAGCAGCATACATACATCAGGG
GGATGGCGGGAGAAAATTGGCGTAGACTAGAGGTTTTGCAAAAGTTGGTC
GACGGAACGTAAGAGCTAGAGTGTTGCTTGCTCAGCCTTGCTTTACTTGT
ATGTTGTTGTAAATGAAAATCTTTTGGATTCGTTACTTATCTCTTTCTTA
TCGAATCGGGCGTTCAGGGTGCATCCGGGGGAAACGCCTTCCCAGTTTAT
TGTTCACGGGGTGATCAATTATCTCACCGGTGGATCACGTCGAGCGCGAG
CCCTGAGGGCAAATACAGTGTTCAAGATAGTGCCCATGCTAAACCCAGAC
GGTGAGTACAATCTGATCAAACGCAATACGTCGAGAGGGGGTGGTGCTGC
CACAGGGTGGTGGTAGCAACGTTTCACGCTGTTTTAGTTTTGACAATTGC
TGCTGAGACCACCAAATCGTGGCCCTGTCTACCAGCGCTTGGTTTATTGA
TCACTTTAGTCTACCTGGTGGATTCCGAGCTCTTGGGAGCACGTATACAC
CTCTCTCATCGCTTTACCCAAAGTATTCGCTCCACTCGTCGATGAATTTC
TGTACAAGGAGTTGTCCACGGTAACTATCGATGTTCCTACCTGGGATTCG
ATCTGAATCGGCACTGGCTCGACCCGTCCGCTTGGGGGCAGCCGGAGATC
CTGTCCCTCAAGAACTTGGTCACACAGTTACACGAAGATCCCAACGTTAA
CCTTGATTTCTACATCGGTGAGCAATTCATCCAGTTGATTGAGAAAGCAA
GTTTTGAAATATGGAGAGAACCTGCATATTTCCTCGTCTCTCCTCTTCTG
ATCCCCTCCTGATGAACCAGCCCTCGCGATCTGGTCGCCCCCTTGCCCTG
TGTTAGAACGACTTGCTAGAAAGCAACGCAAAACTTTATCTTGGTGTTGT
GTACCCTATTGAAAATCTACGTGGGCCAAACGCGTGTTTTTATGACCGTT
ACGAAGTTGTCACCCTTGTGCGTCAGAACGTAAAAAAGTTGTTTTGACAC
TTAGCAACACGTCAACTGCAAGCAATGCAACACAGCACCTCGTTTCAACG
CCACTTGTGATATCCTGTGGGTTAGTCTATCAATAGCACTACAATACCTT
GTACGTCGGGTGACAGCAACACTTTGGATGTGGGGTGAACGCAACACTTA
TACTTGTACATTAAAATATACTTTTTTCCACGCAAAGGTTTCAGCGCTCG
CACACTGCTGTAGCTGGGCACTTTATTAATTTCAAGAACACACCCCTCCC
AAACGAAAATTGTTATCAAACCCGTAACACAGACATACACGCGCACAGCG
TTGGAACCAACTCCTTCATGTACGGCAACAACATATCACCACGAGAGTCG
TCCTCTCAAGCGCGCCAACGGCAATCTGGTGTTGCGGAAACAAACGAGGC
GGGAGTGAGACCATGTTTAATTTCTTCTCCCCAACAACAACAACAACAAC
AACAACAACAACAACAACACCGAGAAGAAGAGTTGTCCGGCCTCAATAAC
GAACCAACAAGAGAAACAGAAGCACCAAAAACAACACCAAAGGCACCAGC
AAGCCCACAGCCAAGACACCCTTCACACGCGTCACCAGCGGACACCGCCA
GCACACACATTCCGGAAACAACCAACCCACGCGGGGAAAACACTATAAGA
TATGAGCCAAAGCCCCTCACACAGGGTCAGCATTCACCTCTACCAGGGCT
CAAGCTCCCAACTCCTAAACTCCCTAACTCCAATGATGACGCTACTCTTG
ACTGTATACAAGGTTGCGCTGAAGAAGTCCGCAATGCCGCGAGTTGTACT
GGTAGTAGCCGGCGATGCACAGAGGTACGCGGCGGGGCGGGAGGGGGGGG
TCAGTCAAACCCCGATAGCAGCAGTGTTTGGGAAACTGAGGAAGGAGATG
GCGAGGGTGCCGAACAACTGCGAATGGGTGTTCAAACGATATTTCCAAGG
ATGCTTGCGGCCAAGGCTCCCGATTTTTCGTTCGCACGGTCAAGGTTCGA
CGCTGACCCGAGTGAGTTGGGTGAAAATTTTACCGCTGATGATACTAACT
TGAGCATTTTCCTGAAGGTCGTACCCCCTTCCCTCCTTGACTTAAGAGGG
GGACTGTGTTCCCTCTTTTCTGAGCCCCCGGTTCCTCTCCAGGAAAACGG
GAATTGGAGTGGGGCCCATCTCCATATTTGAGGCCCCAAACGCAACTGGA
TATTACGCGGTAGAGATTTTTTGGATGTAAAGACGGCCGTGTACCGGAAT
ATGCCCCCCTCCCCTCCCCAGCCCCCAGCCCCTGCCCCCTGCCACAAAAC
AGCATATTCATACTGTACATCCGTGTCGGATGGAAGAGTCGATTTTTTCC
GCGCCTCAAGGAACACCTTATCCATCACCTGTTGCTTCTCACCCTTTGCC
TTATATTTCTTTACTCTTCTGCCGGGGTAATGGTCTACCAGCAAAGGCAG
CCAAACGCCTCTATGCCCTCCACTAAATGCCCGCCCTCTACGTCAACTCC
ATGTCGATTCCCAAACCATAAAGTAAGATCAAATCAGGGACAAATGAGAC
ATTGCGCATTGAGTGAAAAATGTGCCCAAAAGATGACATCTACTAAAGGG
ACAGACAGAGACATCTAAATTTCGGGGATGATGACAGAATATACTGCTCA
GAGAAACCCCATAAGCAGTTTCTCCAAGCCAACCACCACAGCCTGCCGAA
CCAGGATATGGCCCATTGCAATTCTGGGCTACTGCTACCCCATGAGAACC
GGGTGTTTCGTTCAGTTTTTCGTTAATCACACGCACACACACGCATGTTG
ATACGGAGAGATTATGCCGCGACTTGGCGTCTTCGCCCCTCTTTGCTCCG
AACACAATCACATTGGTACGGCTACGCATATTGTCATCAGGCAAGGAGGG
GACAGGCCGGCGGGAGCTGGGGAAGTTGCTCTCCCCCGACGTCTTGTGTT
TTACTCTCGAGGTTTCCTTCTACGCCTCACATCGAGAACACGTAGGACTC
GTACCTTATACACGAGCAGGCTATGTCGAATTAGGAAGGTCAGTGTTTCT
GTTGCAGTTATTTTGGGGGATTATTATGCAACTGAAAAATGGAACAATCT
TGTGCCGACACAGTGGGCGATGAGGCAATCATTCTCTCTTCCTGCTACAT
AGTGTATGTGACAAATTCCTGGCTTACGATAGTAGCTAGACTGTTCTTGT
TAGTATTTACCCTTTTGCTCCATGATGATTTTTCTTCTTCGGGCCATTGA
CATGACAAGTATTGGCGTTGTCACACATGACCCACATCCACGTATATGTG
AGAACACCTTGGTTTTGGATCTACACGGTAGATATATAAATATATTTCTC
GTTTCATCTTTTGTTTGCGTTATTGAATCGCGTTTCCAATATGATTTGAG
AAGCTGCCTCACCTTCCCTTAGCCGACATTTCGTCCCACCAACGTGTTGA
GATTCAATGGCGATGCGGTGAACCGTTTTATCCCCCCCCAAACACCATAA
ACACATTTCAATGTCTCATCCAGCTCCCATGTTATTCACCTTGTCACCCA
TGCACAGGTCCCTCGGTTCGACGTTTGCCGACTACTATGGACTAGATGTT
GCCGATGATCGCGCCCTGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig3139:2600..6870-

>mRNA_H-paniculata_contig3139.8478.1 ID=mRNA_H-paniculata_contig3139.8478.1|Name=mRNA_H-paniculata_contig3139.8478.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2796bp|location=Sequence derived from alignment at H-paniculata_contig3139:2600..6870- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCTTATGCAGCCTCGAGCGCCTAGCCTTGCCCTTCCTTCGACGGGAGGC
CTTGTGTCGAACGTTACAGCAACGACGGGTAGAACTACTCACGATCACCG
CACCGGATGGAGATCCGGGGGCCCGACCGTTGCGAGATCGGAAGTGGGTG
TTTATCTCCGCAAGGTCTTATGCAGCCTCGAGCGCCTAGCCTTGCCCTTC
CTTCGACGGGAGGCCTTGTGTCGAACGTTACAGCAACGACGGGTAGAACT
ACTCACGATCACCGCACCGGATGGAGATCCGGGGGCCCGACCGTTGCGAG
ATCGGAAGTGGGTGTTTATCTCCGCAAGGGTGCATCCGGGGGAAACGCCT
TCCCAGTTTATTGTTCACGGGGTGATCAATTATCTCACCGGTGGATCACG
TCGAGCGCGAGCCCTGAGGGCAAATACAGTGTTCAAGATAGTGCCCATGC
TAAACCCAGACGGGTGCATCCGGGGGAAACGCCTTCCCAGTTTATTGTTC
ACGGGGTGATCAATTATCTCACCGGTGGATCACGTCGAGCGCGAGCCCTG
AGGGCAAATACAGTGTTCAAGATAGTGCCCATGCTAAACCCAGACGGAGT
TGTCCACGGTAACTATCGATGTTCCTACCTGGGATTCGATCTGAATCGGC
ACTGGCTCGACCCGTCCGCTTGGGGGCAGCCGGAGATCCTGTCCCTCAAG
AACTTGGTCACACAGTTACACGAAGATCCCAACGTTAACCTTGATTTCTA
CATCGGAGTTGTCCACGGTAACTATCGATGTTCCTACCTGGGATTCGATC
TGAATCGGCACTGGCTCGACCCGTCCGCTTGGGGGCAGCCGGAGATCCTG
TCCCTCAAGAACTTGGTCACACAGTTACACGAAGATCCCAACGTTAACCT
TGATTTCTACATCGACATACACGCGCACAGCGTTGGAACCAACTCCTTCA
TGTACGGCAACAACATATCACCACGAGAGTCGTCCTCTCAAGCGCGCCAA
CGGCAATCTGGTGTTGCGGAAACAAACGAGGCGGGAGTGAGACCATGTTT
AATTTCTTCTCCCCAACAACAACAACAACAACAACAACAACAACAACAAC
ACCGAGAAGAAGAGTTGTCCGGCCTCAATAACGAACCAACAAGAGAAACA
GAAGCACCAAAAACAACACCAAAGGCACCAGCAAGCCCACAGCCAAGACA
CCCTTCACACGCGTCACCAGCGGACACCGCCAGCACACACATTCCGGAAA
CAACCAACCCACGCGGGGAAAACACTATAAGATATGAGCCAAAGCCCCTC
ACACAGGGTCAGCATTCACCTCTACCAGGGCTCAAGCTCCCAACTCCTAA
ACTCCCTAACTCCAATGATGACGCTACTCTTGACTGTATACAAGGTTGCG
CTGAAGAAGTCCGCAATGCCGCGAGTTGTACTGGTAGTAGCCGGCGATGC
ACAGAGGTACGCGGCGGGGCGGGAGGGGGGGGTCAGTCAAACCCCGATAG
CAGCAGTGTTTGGGAAACTGAGGAAGGAGATGGCGAGGGTGCCGAACAAC
TGCGAATGGGTGTTCAAACGATATTTCCAAGGATGCTTGCGGCCAAGGCT
CCCGATTTTTCGTTCGCACGGTCAAGGTTCGACGCTGACCCGAACATACA
CGCGCACAGCGTTGGAACCAACTCCTTCATGTACGGCAACAACATATCAC
CACGAGAGTCGTCCTCTCAAGCGCGCCAACGGCAATCTGGTGTTGCGGAA
ACAAACGAGGCGGGAGTGAGACCATGTTTAATTTCTTCTCCCCAACAACA
ACAACAACAACAACAACAACAACAACAACACCGAGAAGAAGAGTTGTCCG
GCCTCAATAACGAACCAACAAGAGAAACAGAAGCACCAAAAACAACACCA
AAGGCACCAGCAAGCCCACAGCCAAGACACCCTTCACACGCGTCACCAGC
GGACACCGCCAGCACACACATTCCGGAAACAACCAACCCACGCGGGGAAA
ACACTATAAGATATGAGCCAAAGCCCCTCACACAGGGTCAGCATTCACCT
CTACCAGGGCTCAAGCTCCCAACTCCTAAACTCCCTAACTCCAATGATGA
CGCTACTCTTGACTGTATACAAGGTTGCGCTGAAGAAGTCCGCAATGCCG
CGAGTTGTACTGGTAGTAGCCGGCGATGCACAGAGGTACGCGGCGGGGCG
GGAGGGGGGGGTCAGTCAAACCCCGATAGCAGCAGTGTTTGGGAAACTGA
GGAAGGAGATGGCGAGGGTGCCGAACAACTGCGAATGGGTGTTCAAACGA
TATTTCCAAGGATGCTTGCGGCCAAGGCTCCCGATTTTTCGTTCGCACGG
TCAAGGTTCGACGCTGACCCGAGCAAGGAGGGGACAGGCCGGCGGGAGCT
GGGGAAGTTGCTCTCCCCCGACGTCTTGTGTTTTACTCTCGAGGTTTCCT
TCTACGCCTCACATCGAGAACACGTAGGACTCGTACCTTATACACGAGCA
GGCTATGTCGAATTAGGAAGGCAAGGAGGGGACAGGCCGGCGGGAGCTGG
GGAAGTTGCTCTCCCCCGACGTCTTGTGTTTTACTCTCGAGGTTTCCTTC
TACGCCTCACATCGAGAACACGTAGGACTCGTACCTTATACACGAGCAGG
CTATGTCGAATTAGGAAGGTCCCTCGGTTCGACGTTTGCCGACTACTATG
GACTAGATGTTGCCGATGATCGCGCCCTGTAAGTCCCTCGGTTCGACGTT
TGCCGACTACTATGGACTAGATGTTGCCGATGATCGCGCCCTGTAA
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