mRNA_H-paniculata_contig31382.8476.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: UPI0003F08179 (neurogenic locus Notch protein-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08179) HSP 1 Score: 55.1 bits (131), Expect = 2.180e-7 Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 13 KSNVIVPFLLTDPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSCQTST 162
KS ++ P + TDPCSPNPC NGG C + G G+ CTC + G +C+TST
Sbjct: 161 KSPILSP-ISTDPCSPNPCLNGGVCDL-YGSGYSCTCDSAWVGANCETST 208
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: A0A820PC48_9BILA (Hypothetical protein (Fragment) n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820PC48_9BILA) HSP 1 Score: 50.8 bits (120), Expect = 1.270e-6 Identity = 21/39 (53.85%), Postives = 25/39 (64.10%), Query Frame = 1
Query: 40 LTDPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSCQT 156
L D CSPNPCQNGG+C G G+ C C G G +C+T
Sbjct: 2 LGDACSPNPCQNGGTCRTVNGNGYQCICAAGTTGTNCET 40
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: A0A1M3NHD5_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3NHD5_9DELT) HSP 1 Score: 52.8 bits (125), Expect = 1.420e-6 Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 1
Query: 52 CSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSCQTS 159
C+PNPCQNGG+C D G H C C PGF G +C+T+
Sbjct: 96 CTPNPCQNGGTCDDDANG-HTCKCAPGFSGANCETN 130
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: A0A3B3SUX1_9TELE (EGF-like repeat and discoidin I-like domain-containing protein 3 n=5 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SUX1_9TELE) HSP 1 Score: 51.2 bits (121), Expect = 4.940e-6 Identity = 22/41 (53.66%), Postives = 26/41 (63.41%), Query Frame = 1
Query: 49 PCSPNPCQNGGSCVV------DIGGGHMCTCTPGFGGMSCQ 153
PC PNPC NGG CV+ D G++CTC PGF G+ CQ
Sbjct: 58 PCQPNPCHNGGVCVISETYRGDTFIGYVCTCPPGFNGIHCQ 98
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: A0A821P194_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A821P194_9BILA) HSP 1 Score: 49.3 bits (116), Expect = 5.240e-6 Identity = 20/38 (52.63%), Postives = 21/38 (55.26%), Query Frame = 1
Query: 40 LTDPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSCQ 153
L DPCS NPC NGG C GG C C GF G C+
Sbjct: 5 LGDPCSQNPCMNGGQCYPTNAGGFSCQCPSGFNGQQCE 42
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: A0A8B7ZG15_ACAPL (uncharacterized protein LOC110986398 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZG15_ACAPL) HSP 1 Score: 50.8 bits (120), Expect = 6.820e-6 Identity = 22/39 (56.41%), Postives = 25/39 (64.10%), Query Frame = 1
Query: 34 FLLTDPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSC 150
F DPCSPNPCQNGG+C G +C C PGF G +C
Sbjct: 93 FECHDPCSPNPCQNGGTC-SQYGESFLCQCAPGFEGNNC 130
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: K1PV07_CRAGI (Peptidase inhibitor 16 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1PV07_CRAGI) HSP 1 Score: 50.4 bits (119), Expect = 9.250e-6 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1
Query: 43 TDPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSCQT 156
T+PCS NPC+NGGSC VD G +C CT G+ G +C+T
Sbjct: 263 TNPCSTNPCKNGGSCSVD-GDKAVCQCTSGWSGSTCET 299
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: A0A0L0FFK1_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FFK1_9EUKA) HSP 1 Score: 50.4 bits (119), Expect = 9.350e-6 Identity = 22/37 (59.46%), Postives = 25/37 (67.57%), Query Frame = 1
Query: 40 LTDPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSC 150
+ DPCSPNPC+NGGSC D G G C C GF G +C
Sbjct: 244 VVDPCSPNPCENGGSCSPD-GSGFSCDCGDGFEGPTC 279
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: UPI001939E87E (uncharacterized protein LOC120337321 isoform X1 n=6 Tax=Styela clava TaxID=7725 RepID=UPI001939E87E) HSP 1 Score: 50.4 bits (119), Expect = 9.420e-6 Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 1
Query: 37 LLTDPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSCQTS 159
+ TDPCS NPC NGG+C++ + GG+ C C G+ G CQ +
Sbjct: 669 IATDPCSKNPCGNGGNCLI-VPGGYQCQCRVGYTGNKCQNA 708
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Match: UPI00138FF519 (uncharacterized protein LOC5520382 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FF519) HSP 1 Score: 50.4 bits (119), Expect = 9.440e-6 Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 1
Query: 46 DPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSCQT 156
+PC+ NPCQNGG+C+ + CTCTPG G +C+T
Sbjct: 4822 EPCTKNPCQNGGTCIPSGPSVYTCTCTPGVTGANCET 4858 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31382.8476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31382.8476.1 >prot_H-paniculata_contig31382.8476.1 ID=prot_H-paniculata_contig31382.8476.1|Name=mRNA_H-paniculata_contig31382.8476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp SHLHKSNVIVPFLLTDPCSPNPCQNGGSCVVDIGGGHMCTCTPGFGGMSCback to top mRNA from alignment at H-paniculata_contig31382:659..823+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31382.8476.1 ID=mRNA_H-paniculata_contig31382.8476.1|Name=mRNA_H-paniculata_contig31382.8476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=165bp|location=Sequence derived from alignment at H-paniculata_contig31382:659..823+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31382:659..823+ >mRNA_H-paniculata_contig31382.8476.1 ID=mRNA_H-paniculata_contig31382.8476.1|Name=mRNA_H-paniculata_contig31382.8476.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=330bp|location=Sequence derived from alignment at H-paniculata_contig31382:659..823+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |