prot_H-paniculata_contig3138.8473.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3138.8473.1
Unique Nameprot_H-paniculata_contig3138.8473.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length34
Homology
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BLAST of mRNA_H-paniculata_contig3138.8473.1 vs. uniprot
Match: D7FVR7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR7_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 2.930e-7
Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0 
Query:    2 QVENILNRASRRGQFQTLVYHSAIDPKQVISS 33
            QVEN+L+RASR GQF+TLVYHSAIDPKQ  S+
Sbjct:  489 QVENMLSRASRGGQFETLVYHSAIDPKQAASN 520
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3138.8473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVR7_ECTSI2.930e-778.13DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3138contigH-paniculata_contig3138:518..619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3138.8473.1mRNA_H-paniculata_contig3138.8473.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3138 518..619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3138.8473.1 ID=prot_H-paniculata_contig3138.8473.1|Name=mRNA_H-paniculata_contig3138.8473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=34bp
MQVENILNRASRRGQFQTLVYHSAIDPKQVISSF
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