prot_H-paniculata_contig31379.8472.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31379.8472.1
Unique Nameprot_H-paniculata_contig31379.8472.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length169
Homology
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: D8LJA1_ECTSI (Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA1_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 5.420e-65
Identity = 113/171 (66.08%), Postives = 134/171 (78.36%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEE-SGEKQVTPLMSKRTEVALVDIFYISCVFMPIQIPVEEICRLCTKMQLGPAEAVEL---EGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFKV 169
            L  +  ++ +YC DKFSVE VDV Y++ SG+ + TPL+S RTE A V      C  + ++I  EEICRLCTKMQLGPAE VE+   EG + +KVTVPPTRSD+LH VDV+EDV IAYGFNKIPTTLP+TLTVG H PLNNF DLLREEI+RAG+TEMLTHGLCSR ENFK+
Sbjct:  279 LDTMVTMFSEYCGDKFSVEPVDVTYDDNSGDVKTTPLLSTRTEKASVAEI---CSIIGVEIEEEEICRLCTKMQLGPAEVVEMGEEEGGKGIKVTVPPTRSDILHPVDVVEDVAIAYGFNKIPTTLPATLTVGGHQPLNNFGDLLREEISRAGYTEMLTHGLCSRAENFKM 446          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A7S2UT03_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT03_9STRA)

HSP 1 Score: 175 bits (443), Expect = 3.210e-49
Identity = 100/173 (57.80%), Postives = 125/173 (72.25%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEE----SGEKQ---VTPLMSKRTEVALVDIFYISCVFMPIQIPVEEICRLCTKMQLGPAEA-VELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENF 167
            L  +  ++ QYC + F+VE V+VVYEE    + +K+   VTP+++ RTEVA V     +     I I  EE+CRLCTKMQLGPA    EL+   A+ VTVPPTR+D+LHAVDVIEDV IAYG+N I TT+P+TLTVG   P+N F DLLREEI+RAG+TEMLTHGLCS+ ENF
Sbjct:  149 LDTMVTMFSQYCTNPFTVEEVEVVYEEGHAHASKKEKVAVTPVLTNRTEVAKVKDVNSTA---GINITAEEMCRLCTKMQLGPATYDQELD---AICVTVPPTRADILHAVDVIEDVAIAYGYNNIITTVPNTLTVGGPQPMNLFCDLLREEISRAGYTEMLTHGLCSKQENF 315          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A6G0WW67_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW67_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.940e-48
Identity = 92/169 (54.44%), Postives = 117/169 (69.23%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVF---MPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFK 168
            L+ V  ++ QYC+  F+VE V++ YE  G  + TP +S R  VA V   + S +F    PI + V+ IC LCTKMQL   +A  LE + ++KV VPPTR+D+LHAVDV+EDVGIAYGFN IP T P TLTVG   PLN   D LR+EI+RAG+ E+LTHGLCS +ENFK
Sbjct:  269 LNTVIAMFSQYCDAPFTVEPVEITYENDGHHETTPDLSNREVVAKVKDIH-SMLFGKREPIDLDVQRICELCTKMQL---DASYLEAEHSIKVQVPPTRADILHAVDVMEDVGIAYGFNNIPITYPPTLTVGGAQPLNKLGDQLRDEISRAGYIELLTHGLCSHDENFK 433          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A6A5A388_9STRA (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A388_9STRA)

HSP 1 Score: 166 bits (420), Expect = 3.020e-47
Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVFMP---IQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFKV 169
            L+ V  ++ QYC+  F+VE V++ Y+  G ++VTP +S R  V  VD  + S +F     I + V+ IC LC KMQL    A  L    +++V VPPTRSD+LHAVDV+EDVGIAYGF+ IP T P TLTVG   PLNN  D LR EI+RAG+ E+LTHGLCS +ENFK+
Sbjct:   17 LNTVIAMFSQYCDAPFTVEPVEITYDRDGHREVTPDLSNRQVVTKVDDIH-SMLFGKRPVIDLDVQRICDLCVKMQLA---ATYLPAIHSIEVQVPPTRSDILHAVDVMEDVGIAYGFDNIPMTFPPTLTVGGGQPLNNLGDHLRNEISRAGYLELLTHGLCSHDENFKL 182          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A485LED1_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LED1_9STRA)

HSP 1 Score: 170 bits (431), Expect = 6.990e-47
Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVF---MPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFKV 169
            L+ V  ++ QYC+  F+VE V++VYE+ G K+ TP +S R  V  V   + S +F    PI + ++ IC LC KMQL   +A  L  + ++KV VPPTRSD+LHAVDV+EDVGIAYGF+ IP T P TLTVG   PLN   D LR+EI+RAG+ E+LTHGLCS +ENFK+
Sbjct:  269 LNTVIAMFSQYCDVPFTVEPVEIVYEKDGHKESTPDLSNREVVTKVKDIH-SMLFGKNEPIDLDIQRICDLCVKMQL---DATYLPAEHSIKVQVPPTRSDILHAVDVMEDVGIAYGFDNIPVTFPPTLTVGGCQPLNKLGDHLRDEISRAGYIELLTHGLCSHDENFKL 434          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A7S2BNL5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNL5_9STRA)

HSP 1 Score: 167 bits (424), Expect = 9.220e-46
Identity = 89/171 (52.05%), Postives = 123/171 (71.93%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYE-ESGE---KQVTPLMSKRT-EVALVDIFYISCVFMPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKI-PTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENF 167
            L  V  ++ +YC +KF+VE V V+YE E G    ++VTP +S RT E +L +I    C ++ +++    +C LCTKMQLGP   ++      ++VT+PPTRSD+LH VD++EDV IAYGFNK+ P T+P+TLTVGA LP+N+ SDLLR+E+ARAG+TE+LTHGLC R E F
Sbjct:  295 LDTVVTMFSEYCAEKFTVEPVTVIYENEDGSEDWREVTPRLSTRTQEASLKEI----CSYIDVELEGPLVCELCTKMQLGPVAMID---DDMLRVTIPPTRSDILHEVDIVEDVAIAYGFNKLLPGTMPATLTVGAPLPINHLSDLLRDEVARAGYTEVLTHGLCMRAEVF 458          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A8K1FBR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBR6_PYTOL)

HSP 1 Score: 166 bits (420), Expect = 2.870e-45
Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEE-SGEKQVTPLMSKRT-EVALVDIFYISCVF---MPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFK 168
            L+ V  ++ +YC + F+VE V++VYEE + + + TP +S R+ EV + DIF  S +F    P+ + +E IC LC KMQL      +   QQ + V VPPTRSD+LH +DV+EDVGIAYGFN IP T+PST+T+G   PLN   D LR+EI+RAG+ E+LTHGLCS +ENFK
Sbjct:  272 LNTVIAMFSEYCAEPFTVEPVNIVYEEDASQNEQTPNLSNRSVEVNVKDIF--SMLFGKREPVNLDIERICELCDKMQLAAKPTAD---QQRIVVDVPPTRSDILHPIDVVEDVGIAYGFNNIPLTIPSTMTIGGAQPLNKLGDHLRDEISRAGYIELLTHGLCSHDENFK 437          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: W4GPU1_9STRA (Phenylalanine--tRNA ligase n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GPU1_9STRA)

HSP 1 Score: 166 bits (419), Expect = 3.860e-45
Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVFMP---IQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFKV 169
            L+ V  ++ QYC+  F+VE V++ Y+  G ++VTP +S R  V  VD  + S +F     I + V+ IC LC KMQL    A  L    +++V VPPTRSD+LHAVDV+EDVGIAYGF+ IP T P TLTVG   PLNN  D LR EI+RAG+ E+LTHGLCS +ENFK+
Sbjct:  273 LNTVIAMFSQYCDVPFTVEPVEITYDRDGHREVTPDLSNRQVVTKVDDIH-SMLFGKRPVIDLDVQRICDLCVKMQLA---ATYLPAIHSIEVQVPPTRSDILHAVDVMEDVGIAYGFDNIPMTFPPTLTVGGGQPLNNLGDHLRNEISRAGYLELLTHGLCSHDENFKL 438          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A067CMP1_SAPPC (Phenylalanine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CMP1_SAPPC)

HSP 1 Score: 165 bits (417), Expect = 7.200e-45
Identity = 88/169 (52.07%), Postives = 113/169 (66.86%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVF---MPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFK 168
            L+ +  ++ QYC   F+VE V++VYE  G K+ TP MS R  V  V     S +F    PI + VE IC+LC KMQL   +A  L    ++KV VPPTRSD+LH VDV+EDVGIAYG++ IP T P TLT+G   P+N   D LR+EI+RAG+ E+LTHGLCS +ENFK
Sbjct:  271 LNTMIAMFSQYCAAPFTVEPVEIVYEHDGHKETTPNMSNREVVTKVKDIQ-SMLFGTKEPIDLDVERICKLCVKMQL---QATYLAESHSIKVQVPPTRSDILHPVDVMEDVGIAYGYDNIPVTQPPTLTIGQPQPINKLGDHLRDEISRAGYMELLTHGLCSHDENFK 435          
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A024TNG4_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNG4_9STRA)

HSP 1 Score: 165 bits (417), Expect = 7.370e-45
Identity = 90/169 (53.25%), Postives = 115/169 (68.05%), Query Frame = 0
Query:    3 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVFMP---IQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFK 168
            L+ V  ++ QYC+  F+VE V+V+YE  G ++VTP +S R  V  VD  + S +F     I + V+ IC LC KMQL    A  L    +++V VPPTRSD+LHAVDV+EDVGIAYGF+ IP T P TLTVG   PLN   D LR+EI+RAG+ E+LTHGLCS +ENFK
Sbjct:  273 LNTVIAMFSQYCDAPFTVEPVEVMYERDGHREVTPDLSNRQVVTKVDDIH-SMLFGKRPVIDLDVQRICDLCVKMQLC---ATYLPDVHSIEVQVPPTRSDILHAVDVMEDVGIAYGFDNIPVTFPPTLTVGGGQPLNKLGDHLRDEISRAGYIELLTHGLCSHDENFK 437          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA1_ECTSI5.420e-6566.08Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxI... [more]
A0A7S2UT03_9STRA3.210e-4957.80Phenylalanine--tRNA ligase n=1 Tax=Fibrocapsa japo... [more]
A0A6G0WW67_9STRA4.940e-4854.44Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces eut... [more]
A0A6A5A388_9STRA3.020e-4752.35Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Apha... [more]
A0A485LED1_9STRA6.990e-4752.94Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces ste... [more]
A0A7S2BNL5_9STRA9.220e-4652.05Phenylalanine--tRNA ligase n=1 Tax=Dictyocha specu... [more]
A0A8K1FBR6_PYTOL2.870e-4551.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4GPU1_9STRA3.860e-4552.35Phenylalanine--tRNA ligase n=8 Tax=Aphanomyces ast... [more]
A0A067CMP1_SAPPC7.200e-4552.07Phenylalanine--tRNA ligase n=3 Tax=Saprolegniaceae... [more]
A0A024TNG4_9STRA7.370e-4553.25Phenylalanine--tRNA ligase n=2 Tax=Aphanomyces inv... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005147tRNA synthetase, B5-domainSMARTSM00874B5_2coord: 43..117
e-value: 1.9E-4
score: 26.5
IPR005147tRNA synthetase, B5-domainPFAMPF03484B5coord: 60..117
e-value: 3.6E-12
score: 46.4
IPR005147tRNA synthetase, B5-domainPROSITEPS51483B5coord: 41..122
score: 18.183
IPR041616Phenylalanyl tRNA synthetase beta chain, core domainPFAMPF17759tRNA_synthFbetacoord: 120..168
e-value: 2.5E-5
score: 23.8
NoneNo IPR availableGENE3D3.30.56.10coord: 53..120
e-value: 1.3E-16
score: 62.5
NoneNo IPR availablePANTHERPTHR10947:SF0PHENYLALANINE--TRNA LIGASE BETA SUBUNITcoord: 10..168
NoneNo IPR availablePANTHERPTHR10947PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47coord: 10..168
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 114..166
IPR009061Putative DNA-binding domain superfamilySUPERFAMILY46955Putative DNA-binding domaincoord: 58..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31379contigH-paniculata_contig31379:1002..2207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31379.8472.1mRNA_H-paniculata_contig31379.8472.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31379 1002..2207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31379.8472.1 ID=prot_H-paniculata_contig31379.8472.1|Name=mRNA_H-paniculata_contig31379.8472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp
LSLSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDI
FYISCVFMPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSD
VLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARA
GFTEMLTHGLCSRNENFKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005147tRNA_synthase_B5-dom
IPR041616PheRS_beta_core
IPR009061DNA-bd_dom_put_sf