mRNA_H-paniculata_contig31379.8472.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: D8LJA1_ECTSI (Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA1_ECTSI) HSP 1 Score: 219 bits (557), Expect = 5.420e-65 Identity = 113/171 (66.08%), Postives = 134/171 (78.36%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEE-SGEKQVTPLMSKRTEVALVDIFYISCVFMPIQIPVEEICRLCTKMQLGPAEAVEL---EGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFKV 507
L + ++ +YC DKFSVE VDV Y++ SG+ + TPL+S RTE A V C + ++I EEICRLCTKMQLGPAE VE+ EG + +KVTVPPTRSD+LH VDV+EDV IAYGFNKIPTTLP+TLTVG H PLNNF DLLREEI+RAG+TEMLTHGLCSR ENFK+
Sbjct: 279 LDTMVTMFSEYCGDKFSVEPVDVTYDDNSGDVKTTPLLSTRTEKASVAEI---CSIIGVEIEEEEICRLCTKMQLGPAEVVEMGEEEGGKGIKVTVPPTRSDILHPVDVVEDVAIAYGFNKIPTTLPATLTVGGHQPLNNFGDLLREEISRAGYTEMLTHGLCSRAENFKM 446
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A7S2UT03_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT03_9STRA) HSP 1 Score: 175 bits (443), Expect = 3.210e-49 Identity = 100/173 (57.80%), Postives = 125/173 (72.25%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEE----SGEKQ---VTPLMSKRTEVALVDIFYISCVFMPIQIPVEEICRLCTKMQLGPAEA-VELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENF 501
L + ++ QYC + F+VE V+VVYEE + +K+ VTP+++ RTEVA V + I I EE+CRLCTKMQLGPA EL+ A+ VTVPPTR+D+LHAVDVIEDV IAYG+N I TT+P+TLTVG P+N F DLLREEI+RAG+TEMLTHGLCS+ ENF
Sbjct: 149 LDTMVTMFSQYCTNPFTVEEVEVVYEEGHAHASKKEKVAVTPVLTNRTEVAKVKDVNSTA---GINITAEEMCRLCTKMQLGPATYDQELD---AICVTVPPTRADILHAVDVIEDVAIAYGYNNIITTVPNTLTVGGPQPMNLFCDLLREEISRAGYTEMLTHGLCSKQENF 315
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A6G0WW67_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW67_9STRA) HSP 1 Score: 173 bits (439), Expect = 4.940e-48 Identity = 92/169 (54.44%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVF---MPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFK 504
L+ V ++ QYC+ F+VE V++ YE G + TP +S R VA V + S +F PI + V+ IC LCTKMQL +A LE + ++KV VPPTR+D+LHAVDV+EDVGIAYGFN IP T P TLTVG PLN D LR+EI+RAG+ E+LTHGLCS +ENFK
Sbjct: 269 LNTVIAMFSQYCDAPFTVEPVEITYENDGHHETTPDLSNREVVAKVKDIH-SMLFGKREPIDLDVQRICELCTKMQL---DASYLEAEHSIKVQVPPTRADILHAVDVMEDVGIAYGFNNIPITYPPTLTVGGAQPLNKLGDQLRDEISRAGYIELLTHGLCSHDENFK 433
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A6A5A388_9STRA (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A388_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.020e-47 Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVFMP---IQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFKV 507
L+ V ++ QYC+ F+VE V++ Y+ G ++VTP +S R V VD + S +F I + V+ IC LC KMQL A L +++V VPPTRSD+LHAVDV+EDVGIAYGF+ IP T P TLTVG PLNN D LR EI+RAG+ E+LTHGLCS +ENFK+
Sbjct: 17 LNTVIAMFSQYCDAPFTVEPVEITYDRDGHREVTPDLSNRQVVTKVDDIH-SMLFGKRPVIDLDVQRICDLCVKMQLA---ATYLPAIHSIEVQVPPTRSDILHAVDVMEDVGIAYGFDNIPMTFPPTLTVGGGQPLNNLGDHLRNEISRAGYLELLTHGLCSHDENFKL 182
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A485LED1_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LED1_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.990e-47 Identity = 90/170 (52.94%), Postives = 118/170 (69.41%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVF---MPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFKV 507
L+ V ++ QYC+ F+VE V++VYE+ G K+ TP +S R V V + S +F PI + ++ IC LC KMQL +A L + ++KV VPPTRSD+LHAVDV+EDVGIAYGF+ IP T P TLTVG PLN D LR+EI+RAG+ E+LTHGLCS +ENFK+
Sbjct: 269 LNTVIAMFSQYCDVPFTVEPVEIVYEKDGHKESTPDLSNREVVTKVKDIH-SMLFGKNEPIDLDIQRICDLCVKMQL---DATYLPAEHSIKVQVPPTRSDILHAVDVMEDVGIAYGFDNIPVTFPPTLTVGGCQPLNKLGDHLRDEISRAGYIELLTHGLCSHDENFKL 434
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A7S2BNL5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNL5_9STRA) HSP 1 Score: 167 bits (424), Expect = 9.220e-46 Identity = 89/171 (52.05%), Postives = 123/171 (71.93%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYE-ESGE---KQVTPLMSKRT-EVALVDIFYISCVFMPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKI-PTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENF 501
L V ++ +YC +KF+VE V V+YE E G ++VTP +S RT E +L +I C ++ +++ +C LCTKMQLGP ++ ++VT+PPTRSD+LH VD++EDV IAYGFNK+ P T+P+TLTVGA LP+N+ SDLLR+E+ARAG+TE+LTHGLC R E F
Sbjct: 295 LDTVVTMFSEYCAEKFTVEPVTVIYENEDGSEDWREVTPRLSTRTQEASLKEI----CSYIDVELEGPLVCELCTKMQLGPVAMID---DDMLRVTIPPTRSDILHEVDIVEDVAIAYGFNKLLPGTMPATLTVGAPLPINHLSDLLRDEVARAGYTEVLTHGLCMRAEVF 458
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A8K1FBR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBR6_PYTOL) HSP 1 Score: 166 bits (420), Expect = 2.870e-45 Identity = 88/171 (51.46%), Postives = 119/171 (69.59%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEE-SGEKQVTPLMSKRT-EVALVDIFYISCVF---MPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFK 504
L+ V ++ +YC + F+VE V++VYEE + + + TP +S R+ EV + DIF S +F P+ + +E IC LC KMQL + QQ + V VPPTRSD+LH +DV+EDVGIAYGFN IP T+PST+T+G PLN D LR+EI+RAG+ E+LTHGLCS +ENFK
Sbjct: 272 LNTVIAMFSEYCAEPFTVEPVNIVYEEDASQNEQTPNLSNRSVEVNVKDIF--SMLFGKREPVNLDIERICELCDKMQLAAKPTAD---QQRIVVDVPPTRSDILHPIDVVEDVGIAYGFNNIPLTIPSTMTIGGAQPLNKLGDHLRDEISRAGYIELLTHGLCSHDENFK 437
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: W4GPU1_9STRA (Phenylalanine--tRNA ligase n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GPU1_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.860e-45 Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVFMP---IQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFKV 507
L+ V ++ QYC+ F+VE V++ Y+ G ++VTP +S R V VD + S +F I + V+ IC LC KMQL A L +++V VPPTRSD+LHAVDV+EDVGIAYGF+ IP T P TLTVG PLNN D LR EI+RAG+ E+LTHGLCS +ENFK+
Sbjct: 273 LNTVIAMFSQYCDVPFTVEPVEITYDRDGHREVTPDLSNRQVVTKVDDIH-SMLFGKRPVIDLDVQRICDLCVKMQLA---ATYLPAIHSIEVQVPPTRSDILHAVDVMEDVGIAYGFDNIPMTFPPTLTVGGGQPLNNLGDHLRNEISRAGYLELLTHGLCSHDENFKL 438
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A067CMP1_SAPPC (Phenylalanine--tRNA ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CMP1_SAPPC) HSP 1 Score: 165 bits (417), Expect = 7.200e-45 Identity = 88/169 (52.07%), Postives = 113/169 (66.86%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVF---MPIQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFK 504
L+ + ++ QYC F+VE V++VYE G K+ TP MS R V V S +F PI + VE IC+LC KMQL +A L ++KV VPPTRSD+LH VDV+EDVGIAYG++ IP T P TLT+G P+N D LR+EI+RAG+ E+LTHGLCS +ENFK
Sbjct: 271 LNTMIAMFSQYCAAPFTVEPVEIVYEHDGHKETTPNMSNREVVTKVKDIQ-SMLFGTKEPIDLDVERICKLCVKMQL---QATYLAESHSIKVQVPPTRSDILHPVDVMEDVGIAYGYDNIPVTQPPTLTIGQPQPINKLGDHLRDEISRAGYMELLTHGLCSHDENFK 435
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Match: A0A024TNG4_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNG4_9STRA) HSP 1 Score: 165 bits (417), Expect = 7.370e-45 Identity = 90/169 (53.25%), Postives = 115/169 (68.05%), Query Frame = 1
Query: 7 LSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIFYISCVFMP---IQIPVEEICRLCTKMQLGPAEAVELEGQQAVKVTVPPTRSDVLHAVDVIEDVGIAYGFNKIPTTLPSTLTVGAHLPLNNFSDLLREEIARAGFTEMLTHGLCSRNENFK 504
L+ V ++ QYC+ F+VE V+V+YE G ++VTP +S R V VD + S +F I + V+ IC LC KMQL A L +++V VPPTRSD+LHAVDV+EDVGIAYGF+ IP T P TLTVG PLN D LR+EI+RAG+ E+LTHGLCS +ENFK
Sbjct: 273 LNTVIAMFSQYCDAPFTVEPVEVMYERDGHREVTPDLSNRQVVTKVDDIH-SMLFGKRPVIDLDVQRICDLCVKMQLC---ATYLPDVHSIEVQVPPTRSDILHAVDVMEDVGIAYGFDNIPVTFPPTLTVGGGQPLNKLGDHLRDEISRAGYIELLTHGLCSHDENFK 437 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31379.8472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31379.8472.1 >prot_H-paniculata_contig31379.8472.1 ID=prot_H-paniculata_contig31379.8472.1|Name=mRNA_H-paniculata_contig31379.8472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=169bp LSLSLVYDIYDQYCEDKFSVETVDVVYEESGEKQVTPLMSKRTEVALVDIback to top mRNA from alignment at H-paniculata_contig31379:1002..2207+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31379.8472.1 ID=mRNA_H-paniculata_contig31379.8472.1|Name=mRNA_H-paniculata_contig31379.8472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig31379:1002..2207+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31379:1002..2207+ >mRNA_H-paniculata_contig31379.8472.1 ID=mRNA_H-paniculata_contig31379.8472.1|Name=mRNA_H-paniculata_contig31379.8472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1014bp|location=Sequence derived from alignment at H-paniculata_contig31379:1002..2207+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |