prot_H-paniculata_contig11318.847.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11318.847.1
Unique Nameprot_H-paniculata_contig11318.847.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length154
Homology
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BLAST of mRNA_H-paniculata_contig11318.847.1 vs. uniprot
Match: D7FRM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM4_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 2.110e-58
Identity = 95/142 (66.90%), Postives = 114/142 (80.28%), Query Frame = 0 
Query:    1 MSNQALELYLEAAQEVSDAADGYRVSLMALKCLNNAVWDQLAGQMSFVRLGGPTVVIRLLQDSRPASVLYFACRIFNLIGTSNSESFAELKRNHDLLRILSSILAWCVRCNDPPIPAGDDRLKLLVQVLQGLFLLGARYTPE 142
            M  +ALE Y +AAQE  DAA G+RVSLMALKCLNNAVWDQ  GQ+SFV+LGG  +++ LLQ SRPASVLYFACRIFN++G+SN  +F ELK+  DLL +L S+LA CVRC  PP P G+DR+KL+VQ LQGLFLLG R+T E
Sbjct:   98 MDQEALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDMLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTQE 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11318.847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRM4_ECTSI2.110e-5866.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019318Guanine nucleotide exchange factor, Ric8PFAMPF10165Ric8coord: 21..107
e-value: 2.1E-6
score: 27.1
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 23..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11318contigH-paniculata_contig11318:4791..7143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11318.847.1mRNA_H-paniculata_contig11318.847.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11318 4205..8232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11318.847.1 ID=prot_H-paniculata_contig11318.847.1|Name=mRNA_H-paniculata_contig11318.847.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
MSNQALELYLEAAQEVSDAADGYRVSLMALKCLNNAVWDQLAGQMSFVRL
GGPTVVIRLLQDSRPASVLYFACRIFNLIGTSNSESFAELKRNHDLLRIL
SSILAWCVRCNDPPIPAGDDRLKLLVQVLQGLFLLGARYTPEVRCHDKGG
TRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019318Gua_nucleotide_exch_fac_Ric8
IPR016024ARM-type_fold