prot_H-paniculata_contig3137.8469.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3137.8469.1
Unique Nameprot_H-paniculata_contig3137.8469.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length569
Homology
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A6H5KLF7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF7_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 4.520e-70
Identity = 191/477 (40.04%), Postives = 243/477 (50.94%), Query Frame = 0
Query:  103 WDPFLVKQDMTTPSKPNAFARLLQGAS--SGSKKSSKDSAQPNT-PVSLVSAWDPFAS-GDGKENNAFSKMLAATPSTSNTSASRVKGVRSASTGKRKHPAAGLELSGGAAADA----DAGVMTAATRFCECPVCGKRVMIELCSKHIDTECGGPRTESPQPSLPRWTLGTSPHTAQESRISGTRCREALTAASMDAAASQRTANVSWPSFGMTECVIDDQAIARPKSCKQLHDDNGSRSLARNPESGDDCGGKKSVVELNNPAPASLPLPPVTLTHNLNALPSQSQKKRGSARDAISIKAASTATVSNTLTSCPVCGKRVRADLCSHHLDTQCTGVSSDA---KEQLRQETRTGKEDRRQQSSAVPCGGASSPTAEEAGTTEQAKKSGEGDERNGETAGGLKALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYRRLAS 568
            WDPF       +  + +AFARLL  A+  +GS  ++  ++QP   P S  S+WDPFAS GDGK                    S  KG    S+ KRK PA G  L   AAA       AG   A TRFCECPVCGKRV+IE+CSKH+DTEC G     P  +    T  +    A ESR +      A    S  AA S R+   S P   + E   DD   +R ++  ++ +D   R   + P SGD             PAPA+ P                       AR     + A+    +  +T+CPVCGK+++ADLCS HLDT C+GV+      KE++R E  +G         AVP                  KK     +   E AGGL ALAAELTCP+CLC+FE+ H+LPCSHRFCL CI  CFKSSK+QECPLCK+PAW+RD+ RDV +QNII AYRR+A+
Sbjct:   33 WDPF------GSDCREDAFARLLSAANRPAGSSTTTASTSQPAAGPAS--SSWDPFASTGDGKXXXXXXXXXXXXXXXXXXXXS--KGRSGPSSAKRKRPAVGSTLLSAAAAGGARAGGAGNAEALTRFCECPVCGKRVLIEMCSKHLDTECNGLDATPPAATE---TAKSPLSAATESRGASEPIPPATPPPSALAAGSCRSVLASPP---LEEGKGDD---SRARTAARVAED-APRGQGQQP-SGDAASSSARAAASTFPAPAASPAFEXXXXXXXXXXXXXXXXXXSRARKLGRKRVAA----AEAMTACPVCGKQIQADLCSLHLDTDCSGVTPSGGGLKEEVRDEVGSGNGGEADSGKAVP------------------KK-----DVGSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMAA 461          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: D8LC67_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC67_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 2.020e-46
Identity = 89/164 (54.27%), Postives = 114/164 (69.51%), Query Frame = 0
Query:  405 LTSCPVCGKRVRADLCSHHLDTQCTGVSSDAKEQLRQETRTGKEDRRQQSSAVPCGGASSPTAEEAGTTEQAKKSGEGDERNGETAGGLKALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYRRLAS 568
            +T+CPVCG++V+ADLCS HLDT C+G     KE++R E  +G             GG +     ++G T   + +G       E AGGL ALAAELTCP+CLC+FE+ H+LPCSHRFCL CI  CFKSSK+QECPLCK+PAW+RD+ RDV +QNII AYRR+A+
Sbjct:    1 MTTCPVCGEQVQADLCSLHLDTDCSGGGR--KEEVRDEVGSGN------------GGEA-----DSGKTVPKRDTGS------EAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMAA 139          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A8J5XEH0_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEH0_DIALT)

HSP 1 Score: 79.3 bits (194), Expect = 8.270e-12
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 0
Query:  493 LKALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNII 560
            L  L AEL C +CL  F++PH+LPC H FCL CI     +++  +CPLC+ PAWRR ++++  L NI+
Sbjct:  485 LACLEAELCCQICLATFDDPHSLPCQHTFCLSCIISHMVATRVNDCPLCRQPAWRRQLRKNHKLANIV 552          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A6J2WDC3_CHACN (zinc-binding protein A33-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WDC3_CHACN)

HSP 1 Score: 68.6 bits (166), Expect = 1.080e-8
Identity = 30/71 (42.25%), Postives = 48/71 (67.61%), Query Frame = 0
Query:  495 ALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQ-ECPLCKVPAWRRDMKRDVPLQNIIQAYR 564
            AL+ ++ CPVCLC F +P +LPC H +C  CIT   ++S  Q +CP C++P  ++D+K + PL+N++   R
Sbjct:    4 ALSLQIQCPVCLCDFTDPVSLPCKHSYCRQCITSVLQNSVSQSKCPECRLPFSQKDIKTNRPLRNMVDVTR 74          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: UPI0010FB3F5D (tripartite motif-containing protein 35-like n=1 Tax=Labrus bergylta TaxID=56723 RepID=UPI0010FB3F5D)

HSP 1 Score: 68.2 bits (165), Expect = 1.900e-8
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0
Query:  499 ELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCK 542
            +L+CP+CL +F++P  L CSH FC VC+ DC+K  K QECPLCK
Sbjct:    8 DLSCPICLDIFKDPVMLSCSHSFCRVCVKDCWKEKKNQECPLCK 51          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: M5GEL7_DACPD (RING-type domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GEL7_DACPD)

HSP 1 Score: 66.2 bits (160), Expect = 5.610e-8
Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 0
Query:  488 ETAGGLKALAAELTCPVCLCLFEEPHTLP-CSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYR 564
            E  G L+ L   L CP+C  LF  P  L  C H FC +CI +  K  +K+ECP C++P     +K+++ L+  ++AY+
Sbjct:   23 ENFGDLRTLDRTLRCPICKDLFNAPVLLATCGHSFCSLCIREALKEGEKKECPACRIPTQESSIKKNIVLEESVEAYK 100          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A4W3GZY8_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GZY8_CALMI)

HSP 1 Score: 63.5 bits (153), Expect = 5.660e-8
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0
Query:  494 KALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYRRLA 567
            ++LA +LTCPVCL LF +P +L C H FC  CI  C++  +   CP C+     R+++   PL N+ +  R L+
Sbjct:    8 QSLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHSCPECRRACPGRELRASRPLANLSERARNLS 81          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: UPI001C3FC9B5 (nuclear factor 7, brain-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FC9B5)

HSP 1 Score: 63.5 bits (153), Expect = 1.050e-7
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 0
Query:  494 KALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYRRLA 567
            ++LA +LTCPVCL LF +P +L C H FC  CI  C++  +   CP C+     R+++   PL N+ +  R L+
Sbjct:    8 QSLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQETHSCPECRRACPGRELRASRPLANLSERARNLS 81          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A8C1BAW9_CYPCA (Zgc:92594 n=4 Tax=Cyprininae TaxID=2743694 RepID=A0A8C1BAW9_CYPCA)

HSP 1 Score: 62.8 bits (151), Expect = 1.940e-7
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0
Query:  489 TAGGLKALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSK--KQECPLCKVPAWRRDMKRDVPLQNIIQAYRR 565
            +AG    L  ELTCPVCL L+ +PH LPC H FCL C+      S   +  CP C+   W+++ K    L NI  + RR
Sbjct:   11 SAGDSSILEEELTCPVCLDLYRDPHLLPCGHNFCLPCLRRLKSRSDHGRLRCPECRSANWQKNFK----LANIADSIRR 85          
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A6J2WBU8_CHACN (E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WBU8_CHACN)

HSP 1 Score: 63.5 bits (153), Expect = 2.290e-7
Identity = 29/71 (40.85%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  495 ALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQ-ECPLCKVPAWRRDMKRDVPLQNIIQAYR 564
            AL+ ++ CPVCLC F +P +LPC H +C  CIT    +S  Q +CP C++   ++D+K + PL+N++   R
Sbjct:    4 ALSLQIQCPVCLCDFTDPVSLPCEHSYCRQCITSVLHNSVGQSKCPECRLRFSQKDIKTNRPLRNMVDVTR 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLF7_9PHAE4.520e-7040.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LC67_ECTSI2.020e-4654.27RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5XEH0_DIALT8.270e-1247.06RING-type domain-containing protein n=1 Tax=Diacro... [more]
A0A6J2WDC3_CHACN1.080e-842.25zinc-binding protein A33-like n=1 Tax=Chanos chano... [more]
UPI0010FB3F5D1.900e-859.09tripartite motif-containing protein 35-like n=1 Ta... [more]
M5GEL7_DACPD5.610e-837.18RING-type domain-containing protein n=1 Tax=Dacryo... [more]
A0A4W3GZY8_CALMI5.660e-839.19Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
UPI001C3FC9B51.050e-739.19nuclear factor 7, brain-like n=1 Tax=Callorhinchus... [more]
A0A8C1BAW9_CYPCA1.940e-741.77Zgc:92594 n=4 Tax=Cyprininae TaxID=2743694 RepID=A... [more]
A0A6J2WBU8_CHACN2.290e-740.85E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=Ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 502..541
e-value: 1.5E-5
score: 34.5
coord: 408..467
e-value: 2.4
score: 8.0
coord: 226..313
e-value: 13.0
score: 1.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 502..542
score: 12.253
IPR006642Zinc finger, Rad18-type putativeSMARTSM00734c2hc_5coord: 223..247
e-value: 0.048
score: 20.5
coord: 405..429
e-value: 0.014
score: 24.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 461..566
e-value: 4.5E-20
score: 73.4
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 502..541
e-value: 4.3E-8
score: 32.9
IPR011364Breast cancer type 1 susceptibility protein (BRCA1)PANTHERPTHR13763:SF0BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEINcoord: 491..566
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 491..566
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 517..526
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 493..565

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3137contigH-paniculata_contig3137:13792..17650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3137.8469.1mRNA_H-paniculata_contig3137.8469.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3137 13727..18260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3137.8469.1 ID=prot_H-paniculata_contig3137.8469.1|Name=mRNA_H-paniculata_contig3137.8469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=569bp
MPGGLAAWLNDDTTLEYANSKGTETGGLHSKSMNTPRRHAAAMPLLPSRG
LSSVEAAAGRHHPPSKRNKVVVDVEEVAYSKSVASKTSGASAVATTTVAE
SLWDPFLVKQDMTTPSKPNAFARLLQGASSGSKKSSKDSAQPNTPVSLVS
AWDPFASGDGKENNAFSKMLAATPSTSNTSASRVKGVRSASTGKRKHPAA
GLELSGGAAADADAGVMTAATRFCECPVCGKRVMIELCSKHIDTECGGPR
TESPQPSLPRWTLGTSPHTAQESRISGTRCREALTAASMDAAASQRTANV
SWPSFGMTECVIDDQAIARPKSCKQLHDDNGSRSLARNPESGDDCGGKKS
VVELNNPAPASLPLPPVTLTHNLNALPSQSQKKRGSARDAISIKAASTAT
VSNTLTSCPVCGKRVRADLCSHHLDTQCTGVSSDAKEQLRQETRTGKEDR
RQQSSAVPCGGASSPTAEEAGTTEQAKKSGEGDERNGETAGGLKALAAEL
TCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDM
KRDVPLQNIIQAYRRLAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR006642Znf_Rad18_put
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR011364BRCA1
IPR031099BRCA1-associated
IPR017907Znf_RING_CS