mRNA_H-paniculata_contig3137.8469.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3137.8469.1
Unique NamemRNA_H-paniculata_contig3137.8469.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A6H5KLF7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF7_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 3.020e-68
Identity = 191/477 (40.04%), Postives = 243/477 (50.94%), Query Frame = 3 
Query:  372 WDPFLVKQDMTTPSKPNAFARLLQGAS--SGSKKSSKDSAQPNT-PVSLVSAWDPFAS-GDGKENNAFSKMLAATPSTSNTSASRVKGVRSASTGKRKHPAAGLELSGGAAADA----DAGVMTAATRFCECPVCGKRVMIELCSKHIDTECGGPRTESPQPSLPRWTLGTSPHTAQESRISGTRCREALTAASMDAAASQRTANVSWPSFGMTECVIDDQAIARPKSCKQLHDDNGSRSLARNPESGDDCGGKKSVVELNNPAPASLPLPPVTLTHNLNALPSQSQKKRGSARDAISIKAASTATVSNTLTSCPVCGKRVRADLCSHHLDTQCTGVSSDA---KEQLRQETRTGKEDRRQQSSAVPCGGASSPTAEEAGTTEQAKKSGEGDERNGETAGGLKALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYRRLAS 1769
            WDPF       +  + +AFARLL  A+  +GS  ++  ++QP   P S  S+WDPFAS GDGK                    S  KG    S+ KRK PA G  L   AAA       AG   A TRFCECPVCGKRV+IE+CSKH+DTEC G     P  +    T  +    A ESR +      A    S  AA S R+   S P   + E   DD   +R ++  ++ +D   R   + P SGD             PAPA+ P                       AR     + A+    +  +T+CPVCGK+++ADLCS HLDT C+GV+      KE++R E  +G         AVP                  KK     +   E AGGL ALAAELTCP+CLC+FE+ H+LPCSHRFCL CI  CFKSSK+QECPLCK+PAW+RD+ RDV +QNII AYRR+A+
Sbjct:   33 WDPF------GSDCREDAFARLLSAANRPAGSSTTTASTSQPAAGPAS--SSWDPFASTGDGKXXXXXXXXXXXXXXXXXXXXS--KGRSGPSSAKRKRPAVGSTLLSAAAAGGARAGGAGNAEALTRFCECPVCGKRVLIEMCSKHLDTECNGLDATPPAATE---TAKSPLSAATESRGASEPIPPATPPPSALAAGSCRSVLASPP---LEEGKGDD---SRARTAARVAED-APRGQGQQP-SGDAASSSARAAASTFPAPAASPAFEXXXXXXXXXXXXXXXXXXSRARKLGRKRVAA----AEAMTACPVCGKQIQADLCSLHLDTDCSGVTPSGGGLKEEVRDEVGSGNGGEADSGKAVP------------------KK-----DVGSEAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMAA 461
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BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: D8LC67_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC67_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.640e-45
Identity = 89/164 (54.27%), Postives = 114/164 (69.51%), Query Frame = 3 
Query: 1278 LTSCPVCGKRVRADLCSHHLDTQCTGVSSDAKEQLRQETRTGKEDRRQQSSAVPCGGASSPTAEEAGTTEQAKKSGEGDERNGETAGGLKALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYRRLAS 1769
            +T+CPVCG++V+ADLCS HLDT C+G     KE++R E  +G             GG +     ++G T   + +G       E AGGL ALAAELTCP+CLC+FE+ H+LPCSHRFCL CI  CFKSSK+QECPLCK+PAW+RD+ RDV +QNII AYRR+A+
Sbjct:    1 MTTCPVCGEQVQADLCSLHLDTDCSGGGR--KEEVRDEVGSGN------------GGEA-----DSGKTVPKRDTGS------EAAGGLNALAAELTCPICLCVFEDAHSLPCSHRFCLECILGCFKSSKRQECPLCKIPAWKRDLTRDVSIQNIIAAYRRMAA 139
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BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A8J5XEH0_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XEH0_DIALT)

HSP 1 Score: 80.1 bits (196), Expect = 9.030e-12
Identity = 32/68 (47.06%), Postives = 46/68 (67.65%), Query Frame = 3 
Query: 1542 LKALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNII 1745
            L  L AEL C +CL  F++PH+LPC H FCL CI     +++  +CPLC+ PAWRR ++++  L NI+
Sbjct:  485 LACLEAELCCQICLATFDDPHSLPCQHTFCLSCIISHMVATRVNDCPLCRQPAWRRQLRKNHKLANIV 552
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BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A6J2WDC3_CHACN (zinc-binding protein A33-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WDC3_CHACN)

HSP 1 Score: 68.9 bits (167), Expect = 1.360e-8
Identity = 30/71 (42.25%), Postives = 48/71 (67.61%), Query Frame = 3 
Query: 1548 ALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQ-ECPLCKVPAWRRDMKRDVPLQNIIQAYR 1757
            AL+ ++ CPVCLC F +P +LPC H +C  CIT   ++S  Q +CP C++P  ++D+K + PL+N++   R
Sbjct:    4 ALSLQIQCPVCLCDFTDPVSLPCKHSYCRQCITSVLQNSVSQSKCPECRLPFSQKDIKTNRPLRNMVDVTR 74
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BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: UPI0010FB3F5D (tripartite motif-containing protein 35-like n=1 Tax=Labrus bergylta TaxID=56723 RepID=UPI0010FB3F5D)

HSP 1 Score: 68.6 bits (166), Expect = 2.460e-8
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 3 
Query: 1560 ELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVP----LQNIIQAY 1754
            +L+CP+CL +F++P  L CSH FC VC+ DC+K  K QECPLCK    RR  K  +P    L+N+ +++
Sbjct:    8 DLSCPICLDIFKDPVMLSCSHSFCRVCVKDCWKEKKNQECPLCK----RRHPKGILPPNFALKNLSESF 72
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BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A4W3GZY8_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GZY8_CALMI)

HSP 1 Score: 63.9 bits (154), Expect = 6.250e-8
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 3 
Query: 1545 KALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYRRLA 1766
            ++LA +LTCPVCL LF +P +L C H FC  CI  C++  +   CP C+     R+++   PL N+ +  R L+
Sbjct:    8 QSLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQEAHSCPECRRACPGRELRASRPLANLSERARNLS 81
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BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: M5GEL7_DACPD (RING-type domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GEL7_DACPD)

HSP 1 Score: 66.6 bits (161), Expect = 6.970e-8
Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 3 
Query: 1527 ETAGGLKALAAELTCPVCLCLFEEPHTLP-CSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYR 1757
            E  G L+ L   L CP+C  LF  P  L  C H FC +CI +  K  +K+ECP C++P     +K+++ L+  ++AY+
Sbjct:   23 ENFGDLRTLDRTLRCPICKDLFNAPVLLATCGHSFCSLCIREALKEGEKKECPACRIPTQESSIKKNIVLEESVEAYK 100
[Close]
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: UPI001C3FC9B5 (nuclear factor 7, brain-like n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI001C3FC9B5)

HSP 1 Score: 63.9 bits (154), Expect = 1.190e-7
Identity = 29/74 (39.19%), Postives = 44/74 (59.46%), Query Frame = 3 
Query: 1545 KALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDMKRDVPLQNIIQAYRRLA 1766
            ++LA +LTCPVCL LF +P +L C H FC  CI  C++  +   CP C+     R+++   PL N+ +  R L+
Sbjct:    8 QSLAEDLTCPVCLDLFNDPVSLVCGHYFCRSCIAGCWERQETHSCPECRRACPGRELRASRPLANLSERARNLS 81
[Close]
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A6J2WBU8_CHACN (E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2WBU8_CHACN)

HSP 1 Score: 64.3 bits (155), Expect = 2.020e-7
Identity = 32/88 (36.36%), Postives = 54/88 (61.36%), Query Frame = 3 
Query: 1548 ALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQ-ECPLCKVPAWRRDMKRDVPLQNIIQAYRR-LAS*STKRSRTSKQH 1805
            AL+ ++ CPVCLC F +P +LPC H +C  CIT    +S  Q +CP C++   ++D+K + PL+N++   R  L + S+++     +H
Sbjct:    4 ALSLQIQCPVCLCDFTDPVSLPCEHSYCRQCITSVLHNSVGQSKCPECRLRFSQKDIKTNRPLRNMVDVTREHLQNLSSQKDMLCPEH 91
[Close]
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Match: A0A8C1BAW9_CYPCA (Zgc:92594 n=4 Tax=Cyprininae TaxID=2743694 RepID=A0A8C1BAW9_CYPCA)

HSP 1 Score: 62.8 bits (151), Expect = 2.970e-7
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 3 
Query: 1530 TAGGLKALAAELTCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSK--KQECPLCKVPAWRRDMKRDVPLQNIIQAYRR 1760
            +AG    L  ELTCPVCL L+ +PH LPC H FCL C+      S   +  CP C+   W+++ K    L NI  + RR
Sbjct:   11 SAGDSSILEEELTCPVCLDLYRDPHLLPCGHNFCLPCLRRLKSRSDHGRLRCPECRSANWQKNFK----LANIADSIRR 85
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3137.8469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLF7_9PHAE3.020e-6840.04RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LC67_ECTSI1.640e-4554.27RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5XEH0_DIALT9.030e-1247.06RING-type domain-containing protein n=1 Tax=Diacro... [more]
A0A6J2WDC3_CHACN1.360e-842.25zinc-binding protein A33-like n=1 Tax=Chanos chano... [more]
UPI0010FB3F5D2.460e-846.38tripartite motif-containing protein 35-like n=1 Ta... [more]
A0A4W3GZY8_CALMI6.250e-839.19Uncharacterized protein n=1 Tax=Callorhinchus mili... [more]
M5GEL7_DACPD6.970e-837.18RING-type domain-containing protein n=1 Tax=Dacryo... [more]
UPI001C3FC9B51.190e-739.19nuclear factor 7, brain-like n=1 Tax=Callorhinchus... [more]
A0A6J2WBU8_CHACN2.020e-736.36E3 ubiquitin-protein ligase TRIM21-like n=1 Tax=Ch... [more]
A0A8C1BAW9_CYPCA2.970e-741.77Zgc:92594 n=4 Tax=Cyprininae TaxID=2743694 RepID=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3137contigH-paniculata_contig3137:13727..18260 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score93.2
Seed ortholog evalue4.2e-16
Seed eggNOG ortholog2903.EOD19848
Hectar predicted targeting categoryother localisation
EggNOG free text desc.zinc ion binding
EggNOG OGsKOG2177@1,KOG2177@2759
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-20_004640.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size2382
Cds size1707
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3137.8469.1prot_H-paniculata_contig3137.8469.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3137 13792..17650 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929966.3070133-UTR-H-paniculata_contig3137:13726..137911622929966.3070133-UTR-H-paniculata_contig3137:13726..13791Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3137 13727..13791 +
1691481090.1624334-UTR-H-paniculata_contig3137:13726..137911691481090.1624334-UTR-H-paniculata_contig3137:13726..13791Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3137 13727..13791 +
1622929966.3778417-UTR-H-paniculata_contig3137:17650..182601622929966.3778417-UTR-H-paniculata_contig3137:17650..18260Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3137 17651..18260 +
1691481090.2073164-UTR-H-paniculata_contig3137:17650..182601691481090.2073164-UTR-H-paniculata_contig3137:17650..18260Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3137 17651..18260 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929966.322199-CDS-H-paniculata_contig3137:13791..144871622929966.322199-CDS-H-paniculata_contig3137:13791..14487Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3137 13792..14487 +
1691481090.174132-CDS-H-paniculata_contig3137:13791..144871691481090.174132-CDS-H-paniculata_contig3137:13791..14487Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3137 13792..14487 +
1622929966.3352385-CDS-H-paniculata_contig3137:14909..157271622929966.3352385-CDS-H-paniculata_contig3137:14909..15727Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3137 14910..15727 +
1691481090.181806-CDS-H-paniculata_contig3137:14909..157271691481090.181806-CDS-H-paniculata_contig3137:14909..15727Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3137 14910..15727 +
1622929966.350548-CDS-H-paniculata_contig3137:16631..167431622929966.350548-CDS-H-paniculata_contig3137:16631..16743Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3137 16632..16743 +
1691481090.1899936-CDS-H-paniculata_contig3137:16631..167431691481090.1899936-CDS-H-paniculata_contig3137:16631..16743Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3137 16632..16743 +
1622929966.3626974-CDS-H-paniculata_contig3137:17569..176501622929966.3626974-CDS-H-paniculata_contig3137:17569..17650Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3137 17570..17650 +
1691481090.1985745-CDS-H-paniculata_contig3137:17569..176501691481090.1985745-CDS-H-paniculata_contig3137:17569..17650Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3137 17570..17650 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3137.8469.1

>prot_H-paniculata_contig3137.8469.1 ID=prot_H-paniculata_contig3137.8469.1|Name=mRNA_H-paniculata_contig3137.8469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=569bp
MPGGLAAWLNDDTTLEYANSKGTETGGLHSKSMNTPRRHAAAMPLLPSRG
LSSVEAAAGRHHPPSKRNKVVVDVEEVAYSKSVASKTSGASAVATTTVAE
SLWDPFLVKQDMTTPSKPNAFARLLQGASSGSKKSSKDSAQPNTPVSLVS
AWDPFASGDGKENNAFSKMLAATPSTSNTSASRVKGVRSASTGKRKHPAA
GLELSGGAAADADAGVMTAATRFCECPVCGKRVMIELCSKHIDTECGGPR
TESPQPSLPRWTLGTSPHTAQESRISGTRCREALTAASMDAAASQRTANV
SWPSFGMTECVIDDQAIARPKSCKQLHDDNGSRSLARNPESGDDCGGKKS
VVELNNPAPASLPLPPVTLTHNLNALPSQSQKKRGSARDAISIKAASTAT
VSNTLTSCPVCGKRVRADLCSHHLDTQCTGVSSDAKEQLRQETRTGKEDR
RQQSSAVPCGGASSPTAEEAGTTEQAKKSGEGDERNGETAGGLKALAAEL
TCPVCLCLFEEPHTLPCSHRFCLVCITDCFKSSKKQECPLCKVPAWRRDM
KRDVPLQNIIQAYRRLAS*
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mRNA from alignment at H-paniculata_contig3137:13727..18260+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3137.8469.1 ID=mRNA_H-paniculata_contig3137.8469.1|Name=mRNA_H-paniculata_contig3137.8469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4534bp|location=Sequence derived from alignment at H-paniculata_contig3137:13727..18260+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCTGAGCCAGCTGCGCAGCGTGGGCGTGGCATCGCATACTTCTAAATT
ACACGTTCGTTCATAATGCCGGGTGGACTTGCAGCATGGCTCAACGATGA
CACTACTCTCGAGTATGCGAATAGCAAGGGGACCGAGACAGGTGGTTTAC
ATTCTAAATCAATGAACACACCAAGGCGTCACGCCGCTGCGATGCCCTTG
CTGCCGAGTCGTGGGCTCTCTTCCGTTGAGGCTGCAGCAGGCCGTCATCA
TCCTCCATCAAAGCGAAATAAGGTAGTGGTTGATGTAGAGGAAGTGGCGT
ATTCCAAGAGCGTGGCGAGTAAAACGAGTGGGGCAAGCGCTGTCGCAACG
ACGACCGTTGCCGAGTCCCTGTGGGATCCCTTTTTGGTCAAGCAGGACAT
GACGACTCCGTCCAAACCCAACGCCTTCGCTCGTCTGCTCCAAGGTGCAT
CCTCTGGCTCGAAAAAATCAAGTAAAGATAGCGCTCAGCCCAATACGCCG
GTATCTCTGGTCTCCGCGTGGGATCCGTTTGCGAGCGGCGATGGGAAAGA
GAACAACGCCTTTTCCAAGATGCTGGCCGCTACCCCTTCCACTAGCAATA
CTAGTGCGAGTAGAGTCAAAGGAGTTCGGTCAGCAAGTACGGGCAAGCGA
AAACATCCGGCGGCAGGCTTGGAGTTGTCCGGCGGAGCTGCAGCCGACGC
AGATGCAGGGGTAATGACTGCGGCTACCCGATTCTGTGAATGCCCAGTTT
GTGGGAAGAGGGTGAGCAAGTTGCACATAGTCGCTCCAGCAGGTCCTTTG
CCAAATTTACGGTACTGTACCCTATGGTATTGAGGAGCTGGCTTCATGGT
TCATGTATTCGCTTGTCATTGATCCAAACGGTACAAATGCACTTCAACTA
TGGATATACTGCGCAAGCTCGACAGCGAGAGATTTCGAATAGCAGCCGAA
TGTGATATTGTTCCGTCTCCTGTGGCTCCAATGTTGCAGGGCAAGTCAAT
TAGAGCAGGTTATTTCTTTTTGGATCATGCGGTGATGGTCTCGTAGGCCA
GCGTCTTGACCCAAAGAGCTAATCATGTTGATGCATTGCAAAAGCCACAC
ACTGAATTGTTTACTGCAGCACTACCTCAGGCTCTCGAGTTTACCTTACT
TCTTTTTCCCATCCTATTCTCGTCTATCTTCAGGTAATGATTGAACTTTG
CAGCAAACACATAGATACCGAATGCGGAGGGCCAAGGACAGAGTCACCAC
AACCATCGCTACCACGGTGGACACTGGGAACTTCGCCACATACTGCTCAG
GAGAGTCGAATTTCCGGCACTCGCTGCCGTGAGGCTCTCACAGCTGCATC
CATGGATGCTGCAGCATCACAGAGAACCGCTAACGTCTCGTGGCCGTCGT
TCGGAATGACCGAATGTGTAATCGATGATCAGGCTATCGCACGTCCCAAA
AGCTGCAAACAATTGCACGATGATAATGGCAGTCGTAGTCTGGCTAGGAA
TCCGGAATCCGGGGACGATTGCGGTGGGAAAAAATCCGTTGTTGAACTCA
ACAACCCCGCTCCAGCTTCGCTGCCGCTGCCTCCCGTTACCCTCACCCAC
AACTTGAACGCTCTACCCTCCCAATCGCAAAAAAAGAGGGGCAGCGCGCG
CGATGCGATATCTATTAAGGCGGCATCGACGGCAACGGTTTCCAACACAT
TGACGAGTTGTCCGGTTTGCGGCAAGAGGGTAAGGGCGGACTTGTGCAGT
CATCACCTCGATACGCAATGCACCGGGGTTAGCTCCGACGCTAAGGAGCA
ATTGCGACAAGAAACTCGAACGGGAAAGGAAGACCGGCGGCAGCAATCTT
CCGCAGTGCCCTGTGGTGGTGCCTCTTCACCGACCGCGGAGGAGGCAGGC
ACAACGGAGCAGGCTAAGAAGAGTGGTGAGGGAGATGAGCGGAATGGCGA
GACTGCTGGGGGTTTGAAGGCGCTCGCTGCGGAGCTTACGTGTCCGGTTT
GGTGAGCTTCTATTGTTGATTTCGTATCGTGAGGATGGATGCGCGCACTT
TAATGCGCAAATATGAGTGTCGTTATTTTGATATCTCCACTAATTCATGG
GGGGGGTTACTCCTGGTGTTTTGCATCGGGCGACTTTTGCGGTTACACAC
TTGCGCAGATCCTGCGGCTATGTTTTTTCTTGCTCTTGTCGGGTTATCTT
GTGCTGTCAGCGTATATCTGAATTCAGCGCGGCACAGAGTGTTGTTGTTT
GCGTTTTTCTCTTCTCGATACCTTCCCCGTCTCGATGATAATCGTACGCG
GCTGTATCTCTGGTTAAGTTGCAGCAGGTAGACGAGTCTAAGCCTTCGGG
TAGGGCACGGCTAGAGGGTAACCTTTGCCGATGACCAGACAGGAGTTGAG
ATTAAGGGTCTTGACGTGTGAGGATTCTGAATATTGCGAGTGCAGTCTAA
AGCCGTATGCGAAAACGGCCAAGTCACGTACAACCCAGCGACCGAAGGGT
TGACCGACAAGACATTATACCATGCGTTCTGCATGGGTCTGGAATCGGAA
CACGGTAAAAGTGTTGAGGGCTTAAGCTTCTTCCCTCTCGATGCTGCTGA
TACAGAATTATTTTTTGTGTGGGCTAGAAAGAAAGTTGCAGCAGGAACCC
CAATGACACCCTTACGCCGAGTAGGCGTAGAAGGGTCGTCCGTCGAACCA
TCGAATATGACTCGTTCCGGTTGAGACAACCACCCACGGTGCTGATACGC
AAAACATAAGTTACACCTACTTGATGAGTACTTGCACACCGACCGCAACA
TAGCGTCATTGCTTCGCGGCTGCCTGTTGGTTCACCTTTTTTTACCCGTT
TCCAAATATCTCCTGTTCGCCCATTTTTTGTATGCCCGACCCACTGCGTA
CATAGCTTGTGTCTTTTCGAGGAGCCACATACGTTGCCGTGCAGCCATAG
GTTCTGTCTCGTCTGTATCACGGATTGCTTCAAGTCCAGCAAGAAGCAGG
AATGTCCCCTCTGTAAGGTGAGCGACCGAATATACGAATCACACAGTTAA
TTTGGTCAAGCTTATACAAAGAAGAAAAAATTCCGTTTGTTTTCGCGCCC
CGTCGCCTTTTCTGCTCGATTTTGCAAGCAAGTGCCTGAGGTAAAGTGTC
ATACTCAAATCAGTTATGTTGTCCAACGTTTTGGGAAACGCACTGTTTTC
TCGAGATTTTGATGAATGTGCTATTTTTCAAGACTTGTAAATGCGATATT
TGTTTTAGCTTCCTTCGAATTATTTTCCCTTCGAGTTCGAAAGGAAGTGT
TCGAGGCATGGCGAAATTGTACATGGTCTCTTCTCGGAGCAAAGTGCTAA
TGGCGTTGATCGTCTGTCTATCTGTCCTCTCTGCTGGTTCTCCCGAGGAC
TGAAGGATGAATGTGGCACTTAAAGGTGCCTTTGATGGGTCATAGAGAAT
AGTTGATTTCACTTAAGACCAACCCCTTCTGTCTCTAGCACTTTAAAATC
GAGAGTACCACACGAGAGCGATGCGTGGACCTGTCTATAGGATGAGACGA
TTGCCATGTGATTTCTCTGTCGCTGATGAACTGGAAATCCGTAGCCCATA
CGACAGGTTTCGTAATAAACTCGAAGGGGTATTTTGCAATTTTGATATTT
TCGTCATATGAAAACTGAATTGTTTCGACAAGAATTTCGAGTTTAATACG
CAGAACTTCAGACGCCAGCTAAAAAAAAAACGTTGACTGTTTTATGTTCT
TGGAGATGCTTGAAATATTTGCTTTTAGACTCTTGCCGTTTCTTACCGTT
GCCATGTTGCCCGATCGCGTTCGTCCAACGATGCTCGACTAAGGTGCCGG
CGTGGAGACGGGATATGAAAAGAGACGTACCGCTTCAAAATATCATCCAG
GCCTACCGAAGATTGGCCTCTTAATCTACAAAGCGTAGCCGAACCAGCAA
GCAGCATATATATATATATATATATATTAAGTGTAGCATCAAAGTACCGT
ATACATCTTCACTCAGTGGTACGACTTTAGCCAGCTGACCGCGGTAGCAA
AATGTTGTCGGTCGGTCGGTCATTCACATCTATTACACATCATAGTTAGT
ATTGTATTCTTAATAAAACACATAACATGTCTTGTAGGGAATAAGTACAA
AGTGCTCCATAACCGCACGTAGCGAAATGTCGCATTTGGGGGGTAGAGGT
GGTAATGTCATGGAAAGCGTGTCAGGACATCTTGGAGTACGTACTCTATC
GTCGTAGCGGCGAGGAAATTGTGGATCGTCAATCACTCGCATCTGATGTA
TTTTGTTGTGTGCGGTGCTGTAATTTCTTTTTGGTGTGTGTCTTGTAGGG
TACTCTGTTCGTCGTGATGAACGCGATGAAGAGGGGGCACCCCCCCCCCC
TGCAAAATAAGATTTTCTAATAATATCTTCTCTATAGCGTTGACTAAAAC
CTCGGGAGGAGCACAGCAGCGGAACGAGGAGTATGTAAGCGTGTACCTTT
GGTAGCGACTTGTGCTTCTAGAGAATATGGAGCC
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Coding sequence (CDS) from alignment at H-paniculata_contig3137:13727..18260+

>mRNA_H-paniculata_contig3137.8469.1 ID=mRNA_H-paniculata_contig3137.8469.1|Name=mRNA_H-paniculata_contig3137.8469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3414bp|location=Sequence derived from alignment at H-paniculata_contig3137:13727..18260+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGGGTGGACTTGCAGCATGGCTCAACGATGACACTACTCTCGAGTA
TGCGAATAGCAAGGGGACCGAGACAGGTGGTTTACATTCTAAATCAATGA
ACACACCAAGGCGTCACGCCGCTGCGATGCCCTTGCTGCCGAGTCGTGGG
CTCTCTTCCGTTGAGGCTGCAGCAGGCCGTCATCATCCTCCATCAAAGCG
AAATAAGGTAGTGGTTGATGTAGAGGAAGTGGCGTATTCCAAGAGCGTGG
CGAGTAAAACGAGTGGGGCAAGCGCTGTCGCAACGACGACCGTTGCCGAG
TCCCTGTGGGATCCCTTTTTGGTCAAGCAGGACATGACGACTCCGTCCAA
ACCCAACGCCTTCGCTCGTCTGCTCCAAGGTGCATCCTCTGGCTCGAAAA
AATCAAGTAAAGATAGCGCTCAGCCCAATACGCCGGTATCTCTGGTCTCC
GCGTGGGATCCGTTTGCGAGCGGCGATGGGAAAGAGAACAACGCCTTTTC
CAAGATGCTGGCCGCTACCCCTTCCACTAGCAATACTAGTGCGAGTAGAG
TCAAAGGAGTTCGGTCAGCAAGTACGGGCAAGCGAAAACATCCGGCGGCA
GGCTTGGAGTTGTCCGGCGGAGCTGCAGCCGACGCAGATGCAGGGGTAAT
GACTGCGGCTACCCGATTCTGTGAATGCCCAGTTTGTGGGAAGAGGATGC
CGGGTGGACTTGCAGCATGGCTCAACGATGACACTACTCTCGAGTATGCG
AATAGCAAGGGGACCGAGACAGGTGGTTTACATTCTAAATCAATGAACAC
ACCAAGGCGTCACGCCGCTGCGATGCCCTTGCTGCCGAGTCGTGGGCTCT
CTTCCGTTGAGGCTGCAGCAGGCCGTCATCATCCTCCATCAAAGCGAAAT
AAGGTAGTGGTTGATGTAGAGGAAGTGGCGTATTCCAAGAGCGTGGCGAG
TAAAACGAGTGGGGCAAGCGCTGTCGCAACGACGACCGTTGCCGAGTCCC
TGTGGGATCCCTTTTTGGTCAAGCAGGACATGACGACTCCGTCCAAACCC
AACGCCTTCGCTCGTCTGCTCCAAGGTGCATCCTCTGGCTCGAAAAAATC
AAGTAAAGATAGCGCTCAGCCCAATACGCCGGTATCTCTGGTCTCCGCGT
GGGATCCGTTTGCGAGCGGCGATGGGAAAGAGAACAACGCCTTTTCCAAG
ATGCTGGCCGCTACCCCTTCCACTAGCAATACTAGTGCGAGTAGAGTCAA
AGGAGTTCGGTCAGCAAGTACGGGCAAGCGAAAACATCCGGCGGCAGGCT
TGGAGTTGTCCGGCGGAGCTGCAGCCGACGCAGATGCAGGGGTAATGACT
GCGGCTACCCGATTCTGTGAATGCCCAGTTTGTGGGAAGAGGGTAATGAT
TGAACTTTGCAGCAAACACATAGATACCGAATGCGGAGGGCCAAGGACAG
AGTCACCACAACCATCGCTACCACGGTGGACACTGGGAACTTCGCCACAT
ACTGCTCAGGAGAGTCGAATTTCCGGCACTCGCTGCCGTGAGGCTCTCAC
AGCTGCATCCATGGATGCTGCAGCATCACAGAGAACCGCTAACGTCTCGT
GGCCGTCGTTCGGAATGACCGAATGTGTAATCGATGATCAGGCTATCGCA
CGTCCCAAAAGCTGCAAACAATTGCACGATGATAATGGCAGTCGTAGTCT
GGCTAGGAATCCGGAATCCGGGGACGATTGCGGTGGGAAAAAATCCGTTG
TTGAACTCAACAACCCCGCTCCAGCTTCGCTGCCGCTGCCTCCCGTTACC
CTCACCCACAACTTGAACGCTCTACCCTCCCAATCGCAAAAAAAGAGGGG
CAGCGCGCGCGATGCGATATCTATTAAGGCGGCATCGACGGCAACGGTTT
CCAACACATTGACGAGTTGTCCGGTTTGCGGCAAGAGGGTAAGGGCGGAC
TTGTGCAGTCATCACCTCGATACGCAATGCACCGGGGTTAGCTCCGACGC
TAAGGAGCAATTGCGACAAGAAACTCGAACGGGAAAGGAAGACCGGCGGC
AGCAATCTTCCGCAGTGCCCTGTGGTGGTGCCTCTTCACCGACCGCGGAG
GAGGCAGGCACAACGGAGCAGGCTAAGAAGAGTGGTGAGGGAGATGAGCG
GAATGGCGAGACTGCTGGGGGTTTGAAGGCGCTCGCTGCGGAGCTTACGT
GTCCGGTTTGGTAATGATTGAACTTTGCAGCAAACACATAGATACCGAAT
GCGGAGGGCCAAGGACAGAGTCACCACAACCATCGCTACCACGGTGGACA
CTGGGAACTTCGCCACATACTGCTCAGGAGAGTCGAATTTCCGGCACTCG
CTGCCGTGAGGCTCTCACAGCTGCATCCATGGATGCTGCAGCATCACAGA
GAACCGCTAACGTCTCGTGGCCGTCGTTCGGAATGACCGAATGTGTAATC
GATGATCAGGCTATCGCACGTCCCAAAAGCTGCAAACAATTGCACGATGA
TAATGGCAGTCGTAGTCTGGCTAGGAATCCGGAATCCGGGGACGATTGCG
GTGGGAAAAAATCCGTTGTTGAACTCAACAACCCCGCTCCAGCTTCGCTG
CCGCTGCCTCCCGTTACCCTCACCCACAACTTGAACGCTCTACCCTCCCA
ATCGCAAAAAAAGAGGGGCAGCGCGCGCGATGCGATATCTATTAAGGCGG
CATCGACGGCAACGGTTTCCAACACATTGACGAGTTGTCCGGTTTGCGGC
AAGAGGGTAAGGGCGGACTTGTGCAGTCATCACCTCGATACGCAATGCAC
CGGGGTTAGCTCCGACGCTAAGGAGCAATTGCGACAAGAAACTCGAACGG
GAAAGGAAGACCGGCGGCAGCAATCTTCCGCAGTGCCCTGTGGTGGTGCC
TCTTCACCGACCGCGGAGGAGGCAGGCACAACGGAGCAGGCTAAGAAGAG
TGGTGAGGGAGATGAGCGGAATGGCGAGACTGCTGGGGGTTTGAAGGCGC
TCGCTGCGGAGCTTACGTGTCCGGTTTGCTTGTGTCTTTTCGAGGAGCCA
CATACGTTGCCGTGCAGCCATAGGTTCTGTCTCGTCTGTATCACGGATTG
CTTCAAGTCCAGCAAGAAGCAGGAATGTCCCCTCTGTAAGCTTGTGTCTT
TTCGAGGAGCCACATACGTTGCCGTGCAGCCATAGGTTCTGTCTCGTCTG
TATCACGGATTGCTTCAAGTCCAGCAAGAAGCAGGAATGTCCCCTCTGTA
AGGTGCCGGCGTGGAGACGGGATATGAAAAGAGACGTACCGCTTCAAAAT
ATCATCCAGGCCTACCGAAGATTGGCCTCTTAAGTGCCGGCGTGGAGACG
GGATATGAAAAGAGACGTACCGCTTCAAAATATCATCCAGGCCTACCGAA
GATTGGCCTCTTAA
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