mRNA_H-paniculata_contig3130.8457.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3130.8457.1
Unique NamemRNA_H-paniculata_contig3130.8457.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: A0A6H5JWA5_9PHAE (SAM-dependent MTase TRM10-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA5_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 8.320e-106
Identity = 155/234 (66.24%), Postives = 190/234 (81.20%), Query Frame = 1
Query:    7 EAMRQAGHEIPATGTLWRDLPREQWSVSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRKRAGWISGDNR 708
            EAMR+ G EIP  G  +++LP+EQWSVSQ+IR AK+ EFE L+  GGYRVC+DMAFD LM EKA+AS+VQQ+LY YG+N+KA QPC VTLSGMG VMT  V +L GF+TW+G T++ RCYTE+F KEEL+YL+ADSP TI  LEKGKVYI+GG+VDRN+HKGLC++KA    I T RLPLKK+DL G+ SKVLATNHVFDILV AM + G+L+ +E + LPPRKRA W  GD+R
Sbjct:  132 EAMRKEGQEIPVAGKNYKELPQEQWSVSQRIRNAKRMEFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPVMTAKVNKLQGFDTWLGMTSDARCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKKDLYGAHSKVLATNHVFDILVRAMGNGGNLETVEKKALPPRKRANWTGGDDR 365          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: D8LL56_ECTSI (Similar to RNA (Guanine-9-) methyltransferase domain containing 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL56_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 4.000e-93
Identity = 156/278 (56.12%), Postives = 196/278 (70.50%), Query Frame = 1
Query:  118 EFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRKRAGWISGDNRQMKGKTVTDYKQGAGDKRAGSGTAGDNGGESGCVLPGGTKAAVDGKNDGNIGK--STSAVDDSSTANEDGEREGRAIDAEK 945
            EFE L+  GGYRVC+DMAFD LM EKA+AS+VQQ+LY YG+N+KA QPC VTLSGMG +MT  V +L GF+TW+G TT++RCYTE+F KEEL+YL+ADSP TI  LEKGKVYI+GG+VDRN+HKGLC++KA    I T RLPLKKEDL G+ SKVLATNHVFDILV AM + GDL+++E + LPPRKRA W  GD+R      +   K    D+   S  +  N  E G     G +AA  G + G   K  ST+A D++  + E GE+    ++ EK
Sbjct:    2 EFETLSKEGGYRVCIDMAFDDLMLEKAQASLVQQVLYAYGTNRKAAQPCRVTLSGMGPIMTAKVNKLQGFDTWLGMTTDSRCYTEIFDKEELIYLSADSPATITHLEKGKVYIVGGLVDRNAHKGLCYEKAKKQEIVTGRLPLKKEDLYGAHSKVLATNHVFDILVRAMGNGGDLEKVEKKALPPRKRANWTGGDDRGPSSMPIRKQKSEKPDET--SAESDRNSPELGVAGKEGERAA--GADPGGESKEGSTTAGDNNEKSGEGGEKVDAGVEEEK 275          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: A0A067BJ29_SAPPC (SAM-dependent MTase TRM10-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BJ29_SAPPC)

HSP 1 Score: 169 bits (429), Expect = 2.310e-47
Identity = 92/206 (44.66%), Postives = 126/206 (61.17%), Query Frame = 1
Query:   85 VSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRKRAGWISGD 702
            + +K R   K E   +A S G  + +D  F+  M  K + S+ QQI++ YG NK+++ P  V ++ +       + ++ GFN W+ F+T  +CY +VF+KE LVYLTADSPN IDEL+  KVYIIGGIVDRN  KG+ ++KA   GIATA+LPL K    G A++VL  NHVF ILV    ++ D  Q     LP RK A   SG+
Sbjct:   75 LMRKERAIAKRESFLMAASEGPTIVIDCGFEEAMSSKEKKSLTQQIMFSYGINKRSETPANVHVTSVRGEAEANLTKIGGFNDWLAFSTTPKCYMDVFRKESLVYLTADSPNVIDELQSDKVYIIGGIVDRNRLKGVTYEKAVAQGIATAKLPLDKVLEMGQATRVLTVNHVFQILVNYRTAQ-DWTQATLSALPARKGAQVKSGE 279          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: A0A2D4BSW4_PYTIN (SAM-dependent MTase TRM10-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSW4_PYTIN)

HSP 1 Score: 169 bits (427), Expect = 6.370e-47
Identity = 90/198 (45.45%), Postives = 125/198 (63.13%), Query Frame = 1
Query:   85 VSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRK 678
            + +K R   K E   +A   G ++ +D  F+ LM EK + S+ QQI++ YG N+++  P   T++ +       + +++GFN W+ F   ++ Y +VFKKE LVYLTADSPNTI EL++ KVYIIGGIVDRN  KG  +KKA + GIATA+LPL K    GS+++VL  NHVF+ILV   ES  D +      LP RK
Sbjct:   88 LKRKERQIAKREAFMMATEEGLQIVIDCGFEELMVEKEKKSLSQQIMFSYGVNRRSPAPVRATITSLSGDTRDNLTKISGFNEWLAFKATSKGYMDVFKKESLVYLTADSPNTITELDRDKVYIIGGIVDRNRLKGATYKKAVEQGIATAKLPLDKFLEMGSSTRVLTVNHVFEILVRFGESS-DWKHATMTVLPSRK 284          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: A0A1V9ZIH2_9STRA (RNA (Guanine-9-)-methyltransferase domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIH2_9STRA)

HSP 1 Score: 163 bits (412), Expect = 8.240e-45
Identity = 87/200 (43.50%), Postives = 121/200 (60.50%), Query Frame = 1
Query:   85 VSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRKRA 684
            ++++ R   K E   +A + G  + +D  F+  M  K + S+ QQI++ YG NK+ + P  V L+ +       +Q++ GF+ W+ F   T+CY + F+KE LVYLTADSPN I+EL   KVYIIGGIVDRN  KG  ++KA   GIATA+LPL K    G A++VL  NHVF ILV   +++ D  Q     LP RK A
Sbjct:   78 LARRERTIAKRESFLMAANEGPTIVIDCGFEEDMSSKEKKSLSQQIMFSYGINKRCESPATVFLTSLHGETEANLQKIGGFSEWLAFDATTKCYMDTFRKESLVYLTADSPNVIEELSSDKVYIIGGIVDRNRLKGATYEKAVAQGIATAKLPLDKVVEMGQATRVLTVNHVFQILVD-YQTKQDWTQATMSALPARKGA 276          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: K3WPP4_GLOUD (SAM-dependent MTase TRM10-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPP4_GLOUD)

HSP 1 Score: 163 bits (412), Expect = 1.550e-44
Identity = 87/200 (43.50%), Postives = 122/200 (61.00%), Query Frame = 1
Query:   85 VSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRKRA 684
            + ++ R   K E   +A   G +V +D  F+  M  +A+ S+ QQI+Y YG N+++  P    ++ +       + ++ GF  W+ F +  RCY ++FKKE LVYLTADSPNTI +L + KVYIIGGIVDRN  KG+ +KKA + GI TA+LPL +    G A++VL  NHVF+ILV   E + D  Q    TLP RK A
Sbjct:  102 LRRRERTLAKRETFLMAAEEGIKVVIDCGFEDEMESRAKKSLSQQIMYSYGVNRRSDSPATTYITSLTGETKDNLVKIGGFPEWMAFKSTPRCYIDLFKKESLVYLTADSPNTITKLSRDKVYIIGGIVDRNRLKGITYKKAQEQGIETAKLPLDQVVEMGGATRVLTVNHVFEILVQFAE-KNDWAQAALSTLPSRKNA 300          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: A0A8K1CUE3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUE3_PYTOL)

HSP 1 Score: 161 bits (407), Expect = 2.790e-44
Identity = 85/198 (42.93%), Postives = 124/198 (62.63%), Query Frame = 1
Query:   85 VSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRK 678
            + ++ R   K E   +A   G ++ +D  F+  M EK + S+ QQI++ YG N+++  P   T++ +       + +++GFN W+ F +    Y E+F+KE LVYLTADSPNTI EL+K KVYIIGGIVDRN  KG  + KA + GIATA+LPL +    G++++VL  NHVF+ILV   E++ D +     TLP RK
Sbjct:   60 LRRRERAIAKRESYLMASEEGLQIVIDCGFEEAMSEKEKKSLSQQIMFSYGVNRRSAAPLRATITSLRGDTKDNLTKISGFNEWLAFKSTELSYMELFRKEALVYLTADSPNTITELDKDKVYIIGGIVDRNRLKGATYNKALEQGIATAKLPLDQHVDMGASTRVLTVNHVFEILVRYSETK-DWKGAAMSTLPSRK 256          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: A0A2P4Y172_9STRA (SAM-dependent MTase TRM10-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y172_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.590e-44
Identity = 85/200 (42.50%), Postives = 126/200 (63.00%), Query Frame = 1
Query:   85 VSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRKRA 684
            + +K R   K E   +A   G +V +D AF+  M EK + S+ QQI++ YG N++++ P    ++ +   +   +++++GF+ W  FT  ++ Y ++FK++ LVYLTADSPNTI +L + KVYIIGGIVDRN  KG+ ++KA + GI TA+LPL      GSA++VL  NHVF+IL    E + D  Q    TLP RK A
Sbjct:   48 LRRKERAIAKREAYLMAAEEGVKVVIDCAFEDKMTEKEKKSLSQQIMFSYGVNRRSRTPMNAYITSLHGDIRQNLEKISGFHEWQAFTGSSKSYMDLFKRDSLVYLTADSPNTISKLSRDKVYIIGGIVDRNRLKGITYEKAVEEGIETAKLPLDAVVEMGSATRVLTVNHVFEILAQFSEVK-DWAQATLSTLPSRKGA 246          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: G4YHA4_PHYSP (SAM-dependent MTase TRM10-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YHA4_PHYSP)

HSP 1 Score: 161 bits (407), Expect = 6.950e-44
Identity = 93/224 (41.52%), Postives = 136/224 (60.71%), Query Frame = 1
Query:   13 MRQAGHEIPATGTLWRDLPREQWSVSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRKRA 684
            +++A  EIP    L  D+  E+  + +K R   K E   +A   G +V +D  F+  M EK + S+ QQI++ YG N++++ P    ++ +   +   +++++GF+ W  FT   + Y ++FKKE LVYLTADSPNTI +L + KVYIIGGIVDRN  KG+ ++KA + GI TA+LPL      GSA++VL  NHVF+IL    E + D  Q    TLP RK A
Sbjct:   73 LKKASGEIPPPKEL--DMS-EEAVLRRKERALAKREAFLMAAEEGVKVVIDCEFEEEMTEKEKKSLSQQIMFSYGVNRRSRTPMSAYITSLHGDIQKNLEKISGFHEWQAFTGSQKSYIDLFKKESLVYLTADSPNTITKLSRDKVYIIGGIVDRNRLKGITYQKAVEQGIETAKLPLDTVVEMGSATRVLTVNHVFEILAQFSEVK-DWAQATLSTLPSRKGA 292          
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Match: F0WGA4_9STRA (RNA (Guanine9)methyltransferase domaincontaining protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGA4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.070e-43
Identity = 86/209 (41.15%), Postives = 129/209 (61.72%), Query Frame = 1
Query:   61 DLPREQWSVSQKIRMAKKTEFEELAHSGGYRVCVDMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQRLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIGGIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDILVGAMESEGDLQQIEHQTLPPRKRAG 687
            D+  E     ++ ++A++  F  +A + G++V +D  F+ L+ +K R S+ QQI++ YG N++++ P  V L+ +  +   A+  + GF+ W  F   T CYT  FK+E LVYLTADSPN +  L + KVY+IGGIVDRN  KG  +KKA+   IATARLPL++    GS ++VL  NHVF ILV   +   D ++   + LP RK +G
Sbjct:   55 DMSDEMVLYRREKQLARRERFS-MALAEGHQVVIDCGFEDLLTDKERKSLAQQIMFSYGVNRRSETPLSVMLTSLRGMTLDALNNITGFDAWQSFHPSTECYTIKFKEEALVYLTADSPNVLSTLSRDKVYVIGGIVDRNRLKGATYKKASTQNIATARLPLQEVVDMGSYTRVLTVNHVFAILVYFAQLR-DWKEAALKALPSRKVSG 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3130.8457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWA5_9PHAE8.320e-10666.24SAM-dependent MTase TRM10-type domain-containing p... [more]
D8LL56_ECTSI4.000e-9356.12Similar to RNA (Guanine-9-) methyltransferase doma... [more]
A0A067BJ29_SAPPC2.310e-4744.66SAM-dependent MTase TRM10-type domain-containing p... [more]
A0A2D4BSW4_PYTIN6.370e-4745.45SAM-dependent MTase TRM10-type domain-containing p... [more]
A0A1V9ZIH2_9STRA8.240e-4543.50RNA (Guanine-9-)-methyltransferase domain-containi... [more]
K3WPP4_GLOUD1.550e-4443.50SAM-dependent MTase TRM10-type domain-containing p... [more]
A0A8K1CUE3_PYTOL2.790e-4442.93Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4Y172_9STRA5.590e-4442.50SAM-dependent MTase TRM10-type domain-containing p... [more]
G4YHA4_PHYSP6.950e-4441.52SAM-dependent MTase TRM10-type domain-containing p... [more]
F0WGA4_9STRA3.070e-4341.15RNA (Guanine9)methyltransferase domaincontaining p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3130contigH-paniculata_contig3130:15590..18755 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score289.3
Seed ortholog evalue2.2e-75
Seed eggNOG ortholog2880.D8LL56
KEGG koko:K15445
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tRNA (guanine(9)-N(1))-methyltransferase activity
EggNOG OGsKOG2967@1,KOG2967@2759
Ec32 ortholog descriptiontRNA methyltransferase TRMD/TRM10-type domain
Ec32 orthologEc-25_000090.1
EC2.1.1.221
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons5
Model size945
Cds size933
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3130.8457.1prot_H-paniculata_contig3130.8457.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3130 15602..18755 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929964.3608277-UTR-H-paniculata_contig3130:15589..156011622929964.3608277-UTR-H-paniculata_contig3130:15589..15601Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3130 15590..15601 +
1691481089.2840111-UTR-H-paniculata_contig3130:15589..156011691481089.2840111-UTR-H-paniculata_contig3130:15589..15601Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3130 15590..15601 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929964.3755949-CDS-H-paniculata_contig3130:15601..158081622929964.3755949-CDS-H-paniculata_contig3130:15601..15808Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 15602..15808 +
1691481089.2937918-CDS-H-paniculata_contig3130:15601..158081691481089.2937918-CDS-H-paniculata_contig3130:15601..15808Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 15602..15808 +
1622929964.3865557-CDS-H-paniculata_contig3130:16311..164771622929964.3865557-CDS-H-paniculata_contig3130:16311..16477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 16312..16477 +
1691481089.3014987-CDS-H-paniculata_contig3130:16311..164771691481089.3014987-CDS-H-paniculata_contig3130:16311..16477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 16312..16477 +
1622929964.399549-CDS-H-paniculata_contig3130:17321..174491622929964.399549-CDS-H-paniculata_contig3130:17321..17449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 17322..17449 +
1691481089.3092465-CDS-H-paniculata_contig3130:17321..174491691481089.3092465-CDS-H-paniculata_contig3130:17321..17449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 17322..17449 +
1622929964.4097226-CDS-H-paniculata_contig3130:17924..179901622929964.4097226-CDS-H-paniculata_contig3130:17924..17990Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 17925..17990 +
1691481089.3180544-CDS-H-paniculata_contig3130:17924..179901691481089.3180544-CDS-H-paniculata_contig3130:17924..17990Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 17925..17990 +
1622929964.6536036-CDS-H-paniculata_contig3130:18389..187551622929964.6536036-CDS-H-paniculata_contig3130:18389..18755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 18390..18755 +
1691481089.3339827-CDS-H-paniculata_contig3130:18389..187551691481089.3339827-CDS-H-paniculata_contig3130:18389..18755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3130 18390..18755 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3130.8457.1

>prot_H-paniculata_contig3130.8457.1 ID=prot_H-paniculata_contig3130.8457.1|Name=mRNA_H-paniculata_contig3130.8457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=311bp
MRQAGHEIPATGTLWRDLPREQWSVSQKIRMAKKTEFEELAHSGGYRVCV
DMAFDHLMPEKARASMVQQILYLYGSNKKAKQPCLVTLSGMGSVMTTAVQ
RLAGFNTWVGFTTETRCYTEVFKKEELVYLTADSPNTIDELEKGKVYIIG
GIVDRNSHKGLCFKKATDHGIATARLPLKKEDLNGSASKVLATNHVFDIL
VGAMESEGDLQQIEHQTLPPRKRAGWISGDNRQMKGKTVTDYKQGAGDKR
AGSGTAGDNGGESGCVLPGGTKAAVDGKNDGNIGKSTSAVDDSSTANEDG
EREGRAIDAEK
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mRNA from alignment at H-paniculata_contig3130:15590..18755+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3130.8457.1 ID=mRNA_H-paniculata_contig3130.8457.1|Name=mRNA_H-paniculata_contig3130.8457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3166bp|location=Sequence derived from alignment at H-paniculata_contig3130:15590..18755+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGAGGAGGCTATGCGACAAGCTGGGCATGAGATCCCAGCAACGGGAAC ATTGTGGCGTGACCTTCCCCGAGAACAGTGGTCCGTGAGCCAAAAAATAC GAATGGCGAAGAAAACGGAGTTCGAAGAATTGGCGCATAGCGGAGGCTAC AGGGTGTGCGTAGACATGGCGTTTGACCATCTCATGCCGGAGAAGGCTAG AGCCAGCATGGTTCAGCAGGTAAGAAGCGCTGCCACCATTGTACCTCATG GTGAAAGGGCGGAAACTCCGAAGGGTAGAAACTCAAGCCCGTCATTCGAC GCCTAATGTTCATTAAAACAACATGGTCTTTAATACAATATCGCGGACCG GGGCTTGGCGACACCGGATTCGCGCACGCTTTGTATAACATCAGCATGCA ATATCTGTCTACAAGTTACGCGCAGAGCTCTATGTGAAAAGCGTGGGGTA GCCGTGATCGCAAATCATGAACCATGACATCTGCGATGCTTCATCACTTG GTCGGGTTCTTAAATACGCAAATATATGGCATACCTTCGCCACATGTGGA CAGATGGTTTTGATCAGGACGGCTGGGGGCACACTGTGGCCTTGGGGTAT CGCCGTCTAGTGCTCGCTTCAGCATGGTCCCAAATGCGCCTCAACAGCAG CGCTGGGGAATATTTTGATGTTCCCTCTTTCATTGGCGTCTGCATCGTCT CGTTGTGTGCGGGGTCCATCAGATACTGTACCTGTATGGGTCAAACAAGA AAGCAAAGCAGCCATGCCTCGTGACGTTGAGTGGCATGGGATCCGTCATG ACGACTGCAGTTCAGCGATTGGCGGGCTTCAATACATGGGTGGGATTCAC CACCGAGACACGCTGTTACACAGAGGTTTTCAAGAAAGGTGGGGTACGTT ATTTTTGGTGTTGAAATGATTGTTCACATACAACAGGTGTACGGGTTTAA GAGTGGTCTATTTAAGAGCTTGAAGAGAGGTTAAATTTCCGTGTCACCAA TTTTTTAGATTTGACAGAGGTTTGGGGCTGCGTAGTAGAAACGTTTCTCA AATCAAGCAGAGACGTGGAAAATGACCGACGCTTTCTTTGCATCATCCAA ATGACACCACTTGAGCAGAAGACCACGAATTATTCTTAGTTGAATTTTTT TCTGCGGAAATGCACACAGACTTCTTCCAGCTCAATTTACGACCAAAACC AAGAGTGGGTTTGTCCGGCACCGTTCACAACCTCTCAGCACTGGTTTTGA TGGATATAAAATATTTTTCTCTTGAATCAAAGAAGAGAGGAAGGATCAGA TTCAATAGAGAGTTTCCCGCTTGTCACCACCCCCCTTTAAACCAGTACAC CCACCTACAATATGCTCTTGCCGTTACTTTGCGAACGGCTAGGGTTCTGC ATGCCCTTCTATTAAACTGCGATGTCTACAACTCAAAGCAGCATTCAGCT CAAAGCTAGCTTATTTTTCACTGCGGAAGATATGGCTAGGCTTGTTGACC TTTCCATGGTATTGATGTTCTGCTAAGTGCTTTGTTCGCAGTCAGCTAAG AGCGTAAGAGAATTGCCCAATAAGCGCAGATTGACCGTTACGTTTGTATT AGATGTTATTGTTGCGGTGATTTCTCATCAATTGAATATTAAGTTAACGA ATTTCTCTTTCCCATGTATTTGAACGATCCGTCTAATCTCAATTGTTTGC GTTCCTTGTGTCATCCATTCCTCGTGCCGCAGAGGAATTGGTCTACCTCA CTGCAGACTCACCGAACACAATCGACGAATTAGAAAAGGGCAAGGTCTAC ATTATCGGAGGCATTGTGGATCGGAACAGTCATAAGGGCTTGTGCTTCAA AAAAGCCACGGTAGGGCCACTGCTGTGCTCCTTCGCTACAACTTGAAAAC GTCCATCTAAATTGTGTATTTACGTTGAGTGAGCTTCCATTTCATCCATT GCAGTCTACGAAACTTTGTGGAGTGGGGCTCCCCGACTGTACGTGGTGAC TGGGCGTGGTGCTCTCACTAGTCCATCGTAAACAACCCCCTTGATATGCA AAATTAGACAGCGCCTGGAGTTACCCATACGCACATAAAAGCGTCGTTTT CTAGGGTGCTTGAATTAGCAGGCGGACGACAGCGGTGTGGCAAGGCTGAT TATGTCCTCTTTCTGTAGCCGTGGGAAAGAACACACTTAACTCCGCTCTG GACCCAATGTTCCAAGCTATTCCGGCCGGGCGTCTTCATCTCGACATTTA ACCGTGCACTACTGAACCCACAGCGTGACTTCCTGCTAGTTGATTTGCAC AACGTTTGTTTCTTGGGATTTGCCTGCGCCAACAGGACCACGGGATTGCG ACTGCCCGGCTCCCGCTAAAGAAGGAAGACTTGAATGGCTCCGCAAGTAA GGTAAATTGCCTGTACCTATGAACCTTAGCTGGAAATGCTGGCAACTCAT ATATACGAAACTTTCCTGGGCGCCGTTGTCGTCTGCTCGGGCGCAGCGCG TGTTGGCGCCATGGTTTCCTGTGGCTGAAATTTTGTCGGCCACAAGGAAG GTTGAAAATCTGACGTATTGTGGTGTAGAGGGTTGCTGGGGTACAGTCGA ATTTTGATTACATCAAGCTACGAATGGTGTATGGTGGTGTATCACCGTAG GGTCGGTAAGGCCTCATCCACGAGTATTAATAGCAGTCTAAACATATTCT CGCTGTTCGTTTTTCCTTCAAGAGCAGGCTTTGCTATTTTGATGTTACGT GCCATACTGGTATTTGAACACTGATAGTCTCAAGATCCGCACTTTCCCAG GTCCTCGCGACGAACCACGTATTCGACATCCTTGTGGGAGCAATGGAATC TGAAGGCGACCTTCAACAGATTGAACACCAAACCCTGCCTCCACGCAAGC GGGCAGGGTGGATCAGCGGTGACAATAGGCAAATGAAGGGCAAAACAGTC ACTGACTATAAACAAGGCGCAGGGGATAAACGGGCAGGCAGTGGGACCGC CGGGGACAACGGAGGCGAGAGCGGCTGCGTGCTACCTGGTGGGACAAAGG CTGCGGTTGATGGCAAGAATGATGGGAATATAGGAAAGAGCACAAGCGCG GTTGATGACAGTAGTACAGCGAACGAAGATGGAGAGAGGGAAGGACGAGC TATTGATGCGGAGAAA
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Coding sequence (CDS) from alignment at H-paniculata_contig3130:15590..18755+

>mRNA_H-paniculata_contig3130.8457.1 ID=mRNA_H-paniculata_contig3130.8457.1|Name=mRNA_H-paniculata_contig3130.8457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at H-paniculata_contig3130:15590..18755+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGACAAGCTGGGCATGAGATCCCAGCAACGGGAACATTGTGGCGTGA
CCTTCCCCGAGAACAGTGGTCCGTGAGCCAAAAAATACGAATGGCGAAGA
AAACGGAGTTCGAAGAATTGGCGCATAGCGGAGGCTACAGGGTGTGCGTA
GACATGGCGTTTGACCATCTCATGCCGGAGAAGGCTAGAGCCAGCATGGT
TCAGCAGATGCGACAAGCTGGGCATGAGATCCCAGCAACGGGAACATTGT
GGCGTGACCTTCCCCGAGAACAGTGGTCCGTGAGCCAAAAAATACGAATG
GCGAAGAAAACGGAGTTCGAAGAATTGGCGCATAGCGGAGGCTACAGGGT
GTGCGTAGACATGGCGTTTGACCATCTCATGCCGGAGAAGGCTAGAGCCA
GCATGGTTCAGCAGATACTGTACCTGTATGGGTCAAACAAGAAAGCAAAG
CAGCCATGCCTCGTGACGTTGAGTGGCATGGGATCCGTCATGACGACTGC
AGTTCAGCGATTGGCGGGCTTCAATACATGGGTGGGATTCACCACCGAGA
CACGCTGTTACACAGAGGTTTTCAAGAAAGATACTGTACCTGTATGGGTC
AAACAAGAAAGCAAAGCAGCCATGCCTCGTGACGTTGAGTGGCATGGGAT
CCGTCATGACGACTGCAGTTCAGCGATTGGCGGGCTTCAATACATGGGTG
GGATTCACCACCGAGACACGCTGTTACACAGAGGTTTTCAAGAAAGAGGA
ATTGGTCTACCTCACTGCAGACTCACCGAACACAATCGACGAATTAGAAA
AGGGCAAGGTCTACATTATCGGAGGCATTGTGGATCGGAACAGTCATAAG
GGCTTGTGCTTCAAAAAAGCCACGAGGAATTGGTCTACCTCACTGCAGAC
TCACCGAACACAATCGACGAATTAGAAAAGGGCAAGGTCTACATTATCGG
AGGCATTGTGGATCGGAACAGTCATAAGGGCTTGTGCTTCAAAAAAGCCA
CGGACCACGGGATTGCGACTGCCCGGCTCCCGCTAAAGAAGGAAGACTTG
AATGGCTCCGCAAGTAAGGACCACGGGATTGCGACTGCCCGGCTCCCGCT
AAAGAAGGAAGACTTGAATGGCTCCGCAAGTAAGGTCCTCGCGACGAACC
ACGTATTCGACATCCTTGTGGGAGCAATGGAATCTGAAGGCGACCTTCAA
CAGATTGAACACCAAACCCTGCCTCCACGCAAGCGGGCAGGGTGGATCAG
CGGTGACAATAGGCAAATGAAGGGCAAAACAGTCACTGACTATAAACAAG
GCGCAGGGGATAAACGGGCAGGCAGTGGGACCGCCGGGGACAACGGAGGC
GAGAGCGGCTGCGTGCTACCTGGTGGGACAAAGGCTGCGGTTGATGGCAA
GAATGATGGGAATATAGGAAAGAGCACAAGCGCGGTTGATGACAGTAGTA
CAGCGAACGAAGATGGAGAGAGGGAAGGACGAGCTATTGATGCGGAGAAA
GTCCTCGCGACGAACCACGTATTCGACATCCTTGTGGGAGCAATGGAATC
TGAAGGCGACCTTCAACAGATTGAACACCAAACCCTGCCTCCACGCAAGC
GGGCAGGGTGGATCAGCGGTGACAATAGGCAAATGAAGGGCAAAACAGTC
ACTGACTATAAACAAGGCGCAGGGGATAAACGGGCAGGCAGTGGGACCGC
CGGGGACAACGGAGGCGAGAGCGGCTGCGTGCTACCTGGTGGGACAAAGG
CTGCGGTTGATGGCAAGAATGATGGGAATATAGGAAAGAGCACAAGCGCG
GTTGATGACAGTAGTACAGCGAACGAAGATGGAGAGAGGGAAGGACGAGC
TATTGATGCGGAGAAA
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