prot_H-paniculata_contig313.8455.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig313.8455.1
Unique Nameprot_H-paniculata_contig313.8455.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length158
Homology
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BLAST of mRNA_H-paniculata_contig313.8455.1 vs. uniprot
Match: D8LQQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQQ8_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 5.500e-19
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 0 
Query:   13 IVIRLKGKGQLKLEACTTVERDLWVSALEAAVHRRRAPSLAAEVEQQRWARREKAELHAQQRRSAQRRRENEASRSRMAEKYGLDPKKYA 102
            +VI+L+G  QL+LEA +  ERD WVSAL  AV R RAP L  EVE++RW RRE+A+    + R+A++R+ENE  R+RMAEKYGLDP+KYA
Sbjct:  203 LVIKLRGNEQLRLEARSAAERDRWVSALGEAVRRLRAPRLEDEVEEERWRRREEADAAXXRLRNARKRQENEGLRARMAEKYGLDPEKYA 292
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig313.8455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQQ8_ECTSI5.500e-1958.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig313contigH-paniculata_contig313:34074..38018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig313.8455.1mRNA_H-paniculata_contig313.8455.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig313 34074..38018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig313.8455.1 ID=prot_H-paniculata_contig313.8455.1|Name=mRNA_H-paniculata_contig313.8455.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
GGHDVGGGVPPVIVIRLKGKGQLKLEACTTVERDLWVSALEAAVHRRRAP
SLAAEVEQQRWARREKAELHAQQRRSAQRRRENEASRSRMAEKYGLDPKK
YASRPAPRYDDRNFREERGGSGGGSGGFGGVFSGLSGGGGGFGSGGGGDG
GVVTSGAG
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