prot_H-paniculata_contig3129.8452.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3129.8452.1
Unique Nameprot_H-paniculata_contig3129.8452.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length310
Homology
BLAST of mRNA_H-paniculata_contig3129.8452.1 vs. uniprot
Match: D7FWR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR8_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.330e-39
Identity = 88/204 (43.14%), Postives = 113/204 (55.39%), Query Frame = 0
Query:  113 GSLPTGRVIAHITITNCGREIQP-WEDSVKLVVWRAIPTLKSV------TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSA-VKVAGQAIASGLWPALEVLEMRHCRGKASHFQELAHGLKTGRAPNLRVLNWDDQASNRTIPLDNLILSALAAGKCPRIERLSFTDNYRCPEARIDQLKCALRACPGLMELRMDCS 308
            G+L TGR +  ITIT       P  E +++ VV  +IPTL+ +      T                                   G+  V  AG+A+A+GLWPALEVL   HCR  A HF++LA GL++G AP LRVL WDDQ+S R + +D++IL AL+ G+CP +ERLSFT N  CPE RI  L+  L  CP L ELRMDCS
Sbjct:   32 GALATGRAVVRITITYVHHFQDPALEQAIRRVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCS 235          
BLAST of mRNA_H-paniculata_contig3129.8452.1 vs. uniprot
Match: D8LAY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAY2_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.540e-38
Identity = 89/212 (41.98%), Postives = 110/212 (51.89%), Query Frame = 0
Query:  113 GSLPTGRVIAHITITNCGREI---------QPWEDSVKLVVWRAIPTLKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GSAVKVAGQAIASGLWPALEVLEMRHCRGKASHFQELAHGLKTGRAPNLRVLNWDDQASNRTIPLDNLILSALAAGKCPRIERLSFTDNYRCPEARIDQLKCALRACPGLMELRMDCS 308
            G+L TGR I  ITIT               +  E +V  VV  +IPTL+ +T                                           + V  AG+A+A+GLWPALEVL   HCR  A HF++LA GL++G AP LRVL WDDQ+S R   +D++IL AL+ GKCP +ERLSFT N  CPE  I  L+ AL  CP L ELRMDCS
Sbjct:   28 GALATGRAIVRITITTVFESANESRHHARYKALEQAVGRVVRHSIPTLREITIRGCPTWNGRARVGAILGELVPLSAKRHRVAPRLSRVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDASVDDVILGALSWGKCPLVERLSFTGNRFCPEHSIGYLEEALWVCPRLRELRMDCS 239          
BLAST of mRNA_H-paniculata_contig3129.8452.1 vs. uniprot
Match: A0A6H5KDB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB3_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 2.950e-36
Identity = 87/231 (37.66%), Postives = 114/231 (49.35%), Query Frame = 0
Query:  113 GSLPTGRVIAHITITNCGREIQP-WEDSVKLVVWRAIPTLKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----------------------------------SAVKVAGQAIASGLWPALEVLEMRHCRGKASHFQELAHGLKTGRAPNLRVLNWDDQASNRTIPLDNLILSALAAGKCPRIERLSFTDNYRCPEARIDQLKCALRACPGLMELRMDCS 308
            G+L TGR +  ITIT+      P  E +++ VV  +IPTL+ +T                                   G                                  + V  AG+A+A+GLWPALEVL   HCR  A HF++LA GL++G AP LRVL WDDQ+S R + +D++IL+AL+ G+CP +E LSFT N  CPE RI  L+  L  CP L ELRMDCS
Sbjct:  152 GALATGRAVVRITITHVHETQDPALEQAIRRVVQHSIPTLREITIRGYPTWTGRARPSGGSCSIQYPPCARSPSAGAPHGPDAPGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVATGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSIRDVAVDDVILNALSWGQCPLVEHLSFTGNRFCPEHRITYLEEMLWVCPRLRELRMDCS 382          
BLAST of mRNA_H-paniculata_contig3129.8452.1 vs. uniprot
Match: D7FWR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR9_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.610e-35
Identity = 69/117 (58.97%), Postives = 86/117 (73.50%), Query Frame = 0
Query:  192 SAVKVAGQAIASGLWPALEVLEMRHCRGKASHFQELAHGLKTGRAPNLRVLNWDDQASNRTIPLDNLILSALAAGKCPRIERLSFTDNYRCPEARIDQLKCALRACPGLMELRMDCS 308
            + V  AG+A+A+GLWPALEVL   HCR  A HF++LA GL++G AP LRVL WDDQ+S R + +D++IL AL+ G+CP +ERLSFT N  CPE RI  L+  L  CP L ELRMDCS
Sbjct:  340 TGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCS 456          
BLAST of mRNA_H-paniculata_contig3129.8452.1 vs. uniprot
Match: A0A6H5KU71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU71_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.980e-31
Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 0
Query:  197 AGQAIASGLWPALEVLEMRHCRGKASHFQELAHGLKTGRAPNLRVLNWDDQASNRTIPLDNLILSALAAGKCPRIERLSFTDNYRCPEARIDQLKCALRACPGLMELRMDCS 308
            AG+A+A+GL PALEV    HCR  A HF++LA GL++G AP LRVL WDDQ++ R   LD++IL AL+ G CP +ERLSFT    CPE  I  L+     CP L ELRMDCS
Sbjct:   50 AGKAVAAGLRPALEVPTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSTIRDAALDDVILGALSWGHCPLVERLSFTGTRFCPEHSIRYLEEMFWVCPRLRELRMDCS 161          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3129.8452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWR8_ECTSI1.330e-3943.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LAY2_ECTSI1.540e-3841.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KDB3_9PHAE2.950e-3637.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWR9_ECTSI1.610e-3558.97Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KU71_9PHAE1.980e-3156.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 45..310
e-value: 9.1E-9
score: 36.7
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 199..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3129contigH-paniculata_contig3129:6614..7795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3129.8452.1mRNA_H-paniculata_contig3129.8452.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3129 5092..7795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3129.8452.1 ID=prot_H-paniculata_contig3129.8452.1|Name=mRNA_H-paniculata_contig3129.8452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp
METVSNPPFCEPIANRPLRTVSNKRMHSNTMSNVDSDENSASVRSAVAMN
TLPRSVLSKIGAFTNSNSLSGASNATLAAAPEMSYKIDIRKTARQVSSWL
LPENMATTGLQCGSLPTGRVIAHITITNCGREIQPWEDSVKLVVWRAIPT
LKSVTIKSIPGIGSVRVAAILGRLTIIVAPNLTRVVIQGAGSAVKVAGQA
IASGLWPALEVLEMRHCRGKASHFQELAHGLKTGRAPNLRVLNWDDQASN
RTIPLDNLILSALAAGKCPRIERLSFTDNYRCPEARIDQLKCALRACPGL
MELRMDCSSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf