mRNA_H-paniculata_contig31246.8445.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.540e-38 Identity = 77/172 (44.77%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCND--DHPFE---GSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETG 501
M R +VD E A+ A+EAV+ ++R+AA + ++ S++ R+ G +M A+ G TVLT EEE+ +ED L+YA RH +G R L E+VRQLCND D P++ G ++W FFKRHP L S+RI EANR+ +DD +RL+TFY + + D+ + H+WN DETG
Sbjct: 1 MVRSKVDPEQAQKAIEAVRSGAMSLRAAAQAYGVNKRSLSRRLTGDESMDAKVGPRTVLTVEEESFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETG 172
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 144 bits (363), Expect = 6.100e-37 Identity = 76/172 (44.19%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCND--DHPFE---GSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETG 501
M R +VD E A+ A+EAV+ ++R+AA + ++ S++ R++G ++ A+ G TVLT EEE +ED L+YA RH +G R L E+VRQLCND D P++ G ++W FFKRHP L S+RI EANR+ +DD +RL+TFY + + D+ + H+WN DETG
Sbjct: 1 MVRSKVDPEQAQKAIEAVRSGAMSLRAAAQAYGVNKRSLSRRLSGDVSIDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETG 172
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5JRY4_9PHAE (HTH psq-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY4_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.330e-34 Identity = 71/173 (41.04%), Postives = 103/173 (59.54%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCNDDH-----PFEGSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETGE 504
M R++VDEE + A A+ ++R AA F + TSI +R G+ AM A+ G+ T+L+ EEE ++ED+L++A R+ L R L + VR+LCND P +G K W F +RHPR+ S+RI EANR++ D+ R+ FY+ W L DE + H+ N DETGE
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGM-SVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGE 172
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5KKS3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS3_9PHAE) HSP 1 Score: 128 bits (321), Expect = 1.820e-33 Identity = 71/171 (41.52%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCNDDH----PFEGSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETG 501
M R+RVD + A+ A EAV+G ++R AA + + S+ R+ G AM A+ G TV++ EEE +IED L+YAGR+CL +R L+E VR LC D P +G K W F +RHPR+ ++RI EANRV+ + R+ FY W L ++++ H+ N DETG
Sbjct: 15 MGRRRVDAQQAQKACEAVRGGM-SVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETG 184
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE) HSP 1 Score: 128 bits (321), Expect = 1.190e-32 Identity = 71/172 (41.28%), Postives = 101/172 (58.72%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCNDDH-----PFEGSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETG 501
M R++VDEE + A A+ ++R AA F + TSI +R G+ AM A+ G T+L+ EEE ++ED+L+ A R+ L R L + VR+LCND P +G K W F +RHPR+ S+RI EANR++ D+ R+ FY+ W L DEV+ H+ N DETG
Sbjct: 1 MTRRKVDEEKVRKAFAAIDNGM-SVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETG 171
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5K547_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K547_9PHAE) HSP 1 Score: 126 bits (316), Expect = 2.090e-32 Identity = 71/176 (40.34%), Postives = 101/176 (57.39%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCNDDH-----PFEGSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETGEVRM 513
M R +VDEE + A A+ ++R AA F + TSI +R G+ AM A+ G T+L+ EEE ++ED+L+ A R+ L R L + VR+LCND P +G K W F +RHPR+ S+ I EANR++ D+ R+ FY+ W L DEV+ H+ N DETG V +
Sbjct: 1 MTRCKVDEEKVRKAFAAIDNGM-SVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTHIYEANRITEDEEPRMVQFYERWAALLDEVKLEANHVHNTDETGTVLL 175
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.890e-31 Identity = 70/172 (40.70%), Postives = 102/172 (59.30%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCNDDH-----PFEGSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETG 501
M R++VDEE + A A+ ++R AA F + TSI +R G+ AM A+ G+ T+L+ EEE ++ED+L++A R+ L R L + VR+LCND P +G K W F +RHPR+ S+RI EANR++ D+ R+ FY+ W L DE + H+ N DETG
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGM-SVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETG 171
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 128 bits (321), Expect = 3.240e-31 Identity = 71/171 (41.52%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCNDDH----PFEGSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETG 501
M R+RVD + A+ A EAV+G ++R AA + + S+ R+ G AM A+ G TV++ EEE +IED L+YAGR+CL +R L+E VR LC D P +G K W F +RHPR+ ++RI EANRV+ + R+ FY W L ++++ H+ N DETG
Sbjct: 1 MGRRRVDAQQAQKACEAVRGGM-SVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLDRKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETG 170
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5L513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L513_9PHAE) HSP 1 Score: 116 bits (291), Expect = 3.580e-30 Identity = 58/124 (46.77%), Postives = 73/124 (58.87%), Query Frame = 1
Query: 145 MVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCNDDHPF-----EGSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETG 501
M AR G T L+ EEE ++ED+L+YAGRHCL R L+E V QLCND P +G K W F KRHPR+ ++RI EANR++ D R+ FY W L DE + H+ N DETG
Sbjct: 1 MKARVGPATFLSEEEEKSLEDVLLYAGRHCLAVGRLHLLETVIQLCNDGRPIPWDPGQGPGKDWLAGFLKRHPRVSERTTRIYEANRITEDKEPRIVEFYKKWAALLDEHKPEADHVHNTDETG 124
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 122 bits (307), Expect = 5.860e-30 Identity = 70/177 (39.55%), Postives = 101/177 (57.06%), Query Frame = 1
Query: 1 MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVARPGSPTVLTAEEETTIEDLLVYAGRHCLGTTRPQLVENVRQLCNDDH-----PFEGSDKAWFTAFFKRHPRLVLSSSRICEANRVSTDDRSRLETFYDGWQDLFDEVQRTPTHIWNNDETGEVRMH 516
M R++VDEE + A A+ ++R AA F + TSI +R G+AAM A+ G T+L+ EEE ++E +L++A R+ L R L + VR+LCND P +G K W F +RH R+ S+RI EAN ++ D+ R+ FY+ W L DEV+ H+ N DET R H
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGM-SVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERWAALLDEVKPEANHVHNTDETEPPRXH 176 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31246.8445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31246.8445.1 >prot_H-paniculata_contig31246.8445.1 ID=prot_H-paniculata_contig31246.8445.1|Name=mRNA_H-paniculata_contig31246.8445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp MPRKRVDEETAKPAVEAVKGKEETIRSAALTFQLSLTSIANRMAGRAAMVback to top mRNA from alignment at H-paniculata_contig31246:1776..2306+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31246.8445.1 ID=mRNA_H-paniculata_contig31246.8445.1|Name=mRNA_H-paniculata_contig31246.8445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=531bp|location=Sequence derived from alignment at H-paniculata_contig31246:1776..2306+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31246:1776..2306+ >mRNA_H-paniculata_contig31246.8445.1 ID=mRNA_H-paniculata_contig31246.8445.1|Name=mRNA_H-paniculata_contig31246.8445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig31246:1776..2306+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |