prot_H-paniculata_contig31241.8444.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig31241.8444.1
Unique Nameprot_H-paniculata_contig31241.8444.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
BLAST of mRNA_H-paniculata_contig31241.8444.1 vs. uniprot
Match: D7FTQ0_ECTSI (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ0_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 5.450e-15
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 KAALSAHTDVPTAHYLRMVNCWHHRELQGSLDSLHRFFDYAARRG 45
            +AAL + +DVP AH+LR+VNC HHREL+GSLDSLHR+FDYA RRG
Sbjct:  225 QAALGSRSDVPKAHFLRLVNCMHHRELEGSLDSLHRYFDYAVRRG 269          
BLAST of mRNA_H-paniculata_contig31241.8444.1 vs. uniprot
Match: A0A6H5KKY0_9PHAE (Anaphase-promoting complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY0_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.460e-15
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    1 KAALSAHTDVPTAHYLRMVNCWHHRELQGSLDSLHRFFDYAARRG 45
            +AAL + +DVP AH+LR+VNC HHREL+GSLDSLHR+FDYA RRG
Sbjct:  186 QAALGSRSDVPKAHFLRLVNCMHHRELEGSLDSLHRYFDYAVRRG 230          
BLAST of mRNA_H-paniculata_contig31241.8444.1 vs. uniprot
Match: A0A7S2U8I9_9STRA (Anaphase-promoting complex subunit 5 (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8I9_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.400e-7
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    4 LSAHTDVPTAHYLRMVNCWHHRELQGSLDSLHRFFDYA 41
            L ++ ++P AH+LR +NC HH E  G+LDSLHR+FDYA
Sbjct:  218 LGSYPELPAAHFLRFLNCMHHGERVGALDSLHRYFDYA 255          
BLAST of mRNA_H-paniculata_contig31241.8444.1 vs. uniprot
Match: W7U440_9STRA (Anaphase-promoting complex subunit 5 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U440_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 5.570e-7
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    1 KAALSAHTDVPTAHYLRMVNCWHHRELQGSLDSLHRFFDYAARRG 45
            +A L  H ++P   +LR +N   HRE+ G+LD+LHR+FDYA RRG
Sbjct:  233 EALLQQHPELPRGQFLRYLNSSRHREVAGALDALHRYFDYAIRRG 277          
BLAST of mRNA_H-paniculata_contig31241.8444.1 vs. uniprot
Match: A0A388K336_CHABU (Anaphase-promoting complex subunit 5 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K336_CHABU)

HSP 1 Score: 49.3 bits (116), Expect = 2.410e-5
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 0
Query:    9 DVPTAHYLRMVNCWHHRELQGSLDSLHRFFDYAA 42
            ++P  HYLR +NC HH +  G++DSLHR+FDY  
Sbjct:  393 EMPKIHYLRYLNCLHHGDYPGAMDSLHRYFDYRV 426          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31241.8444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FTQ0_ECTSI5.450e-1573.33Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
A0A6H5KKY0_9PHAE5.460e-1573.33Anaphase-promoting complex subunit 5 n=1 Tax=Ectoc... [more]
A0A7S2U8I9_9STRA1.400e-757.89Anaphase-promoting complex subunit 5 (Fragment) n=... [more]
W7U440_9STRA5.570e-751.11Anaphase-promoting complex subunit 5 n=2 Tax=Monod... [more]
A0A388K336_CHABU2.410e-552.94Anaphase-promoting complex subunit 5 n=1 Tax=Chara... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026000Anaphase-promoting complex subunit 5 domainPFAMPF12862ANAPC5coord: 14..46
e-value: 1.2E-6
score: 28.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig31241contigH-paniculata_contig31241:1822..1986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig31241.8444.1mRNA_H-paniculata_contig31241.8444.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig31241 1822..1986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig31241.8444.1 ID=prot_H-paniculata_contig31241.8444.1|Name=mRNA_H-paniculata_contig31241.8444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
KAALSAHTDVPTAHYLRMVNCWHHRELQGSLDSLHRFFDYAARRGTRCRK
TGWW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026000Apc5_dom