prot_H-paniculata_contig3124.8443.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3124.8443.1
Unique Nameprot_H-paniculata_contig3124.8443.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length225
Homology
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BLAST of mRNA_H-paniculata_contig3124.8443.1 vs. uniprot
Match: D8LPX6_ECTSI (C2 NT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX6_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 6.730e-25
Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 0 
Query:   47 KASGLPPKQVVTTQSEWNQTMQMHLTLFLDKRTSRFQDKEYKLRLVQ-KDNRGMLVPPVLATFTLDASLYAHLGVG 121
            ++SGLPPK V T +SEW QTMQ+ +TLFLDKR+ RFQDKEYKLRLVQ ++   +++ P LATFTLDASLYAHLG G
Sbjct:   10 QSSGLPPKVVSTARSEWEQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEEGCTIIMAPALATFTLDASLYAHLGAG 85
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3124.8443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPX6_ECTSI6.730e-2568.42C2 NT-type domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019448NT-type C2 domainPFAMPF10358NT-C2coord: 18..119
e-value: 2.6E-6
score: 27.2
IPR019448NT-type C2 domainPROSITEPS51840C2_NTcoord: 8..152
score: 16.807

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3124contigH-paniculata_contig3124:7785..18699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3124.8443.1mRNA_H-paniculata_contig3124.8443.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3124 7785..18699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3124.8443.1 ID=prot_H-paniculata_contig3124.8443.1|Name=mRNA_H-paniculata_contig3124.8443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp
MAALLRKASRVNLVAMDFMLQVTVEELVLGTLDAGRTLSFELSRGTKASG
LPPKQVVTTQSEWNQTMQMHLTLFLDKRTSRFQDKEYKLRLVQKDNRGML
VPPVLATFTLDASLYAHLGVGPSVEQQVDLYAPKLNGLGGCATVRLRVRC
CEPREGPLPDSTGMTRSSGSGLPPRGAMNHMRRPSLPPLQSALLVGSSFG
FSMSGSDSRQSVGSTGSSGFSTPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019448NT-C2