mRNA_H-paniculata_contig3124.8443.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3124.8443.1
Unique NamemRNA_H-paniculata_contig3124.8443.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3124.8443.1 vs. uniprot
Match: D8LPX6_ECTSI (C2 NT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX6_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 6.730e-25
Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 1
Query:  139 KASGLPPKQVVTTQSEWNQTMQMHLTLFLDKRTSRFQDKEYKLRLVQ-KDNRGMLVPPVLATFTLDASLYAHLGVG 363
            ++SGLPPK V T +SEW QTMQ+ +TLFLDKR+ RFQDKEYKLRLVQ ++   +++ P LATFTLDASLYAHLG G
Sbjct:   10 QSSGLPPKVVSTARSEWEQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEEGCTIIMAPALATFTLDASLYAHLGAG 85          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3124.8443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPX6_ECTSI6.730e-2568.42C2 NT-type domain-containing protein n=1 Tax=Ectoc... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3124contigH-paniculata_contig3124:7785..18699 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEEIG1/EHBP1 N-terminal domain
Ec32 orthologEc-15_001770.1
Exons5
Model size675
Cds size675
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3124.8443.1prot_H-paniculata_contig3124.8443.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3124 7785..18699 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929962.3064451-CDS-H-paniculata_contig3124:7784..79251622929962.3064451-CDS-H-paniculata_contig3124:7784..7925Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 7785..7925 +
1691481088.238452-CDS-H-paniculata_contig3124:7784..79251691481088.238452-CDS-H-paniculata_contig3124:7784..7925Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 7785..7925 +
1622929962.323996-CDS-H-paniculata_contig3124:14911..150061622929962.323996-CDS-H-paniculata_contig3124:14911..15006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 14912..15006 +
1691481088.2497132-CDS-H-paniculata_contig3124:14911..150061691481088.2497132-CDS-H-paniculata_contig3124:14911..15006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 14912..15006 +
1622929962.3385477-CDS-H-paniculata_contig3124:16184..163101622929962.3385477-CDS-H-paniculata_contig3124:16184..16310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 16185..16310 +
1691481088.2642522-CDS-H-paniculata_contig3124:16184..163101691481088.2642522-CDS-H-paniculata_contig3124:16184..16310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 16185..16310 +
1622929962.3548734-CDS-H-paniculata_contig3124:16926..170411622929962.3548734-CDS-H-paniculata_contig3124:16926..17041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 16927..17041 +
1691481088.272307-CDS-H-paniculata_contig3124:16926..170411691481088.272307-CDS-H-paniculata_contig3124:16926..17041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 16927..17041 +
1622929962.3678186-CDS-H-paniculata_contig3124:18501..186991622929962.3678186-CDS-H-paniculata_contig3124:18501..18699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 18502..18699 +
1691481088.279951-CDS-H-paniculata_contig3124:18501..186991691481088.279951-CDS-H-paniculata_contig3124:18501..18699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3124 18502..18699 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3124.8443.1

>prot_H-paniculata_contig3124.8443.1 ID=prot_H-paniculata_contig3124.8443.1|Name=mRNA_H-paniculata_contig3124.8443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp
MAALLRKASRVNLVAMDFMLQVTVEELVLGTLDAGRTLSFELSRGTKASG
LPPKQVVTTQSEWNQTMQMHLTLFLDKRTSRFQDKEYKLRLVQKDNRGML
VPPVLATFTLDASLYAHLGVGPSVEQQVDLYAPKLNGLGGCATVRLRVRC
CEPREGPLPDSTGMTRSSGSGLPPRGAMNHMRRPSLPPLQSALLVGSSFG
FSMSGSDSRQSVGSTGSSGFSTPM*
back to top

mRNA from alignment at H-paniculata_contig3124:7785..18699+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3124.8443.1 ID=mRNA_H-paniculata_contig3124.8443.1|Name=mRNA_H-paniculata_contig3124.8443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10915bp|location=Sequence derived from alignment at H-paniculata_contig3124:7785..18699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGCATTGCTGAGGAAAGCTTCGAGAGTGAACCTCGTGGCGATGGA CTTTATGCTGCAAGTTACAGTGGAGGAGCTAGTGTTGGGGACGCTTGATG CTGGGCGCACGCTTAGCTTTGAGCTATCTCGAGGGACCAAGGTGTGTTAG ACAGTCTGTTCCGTCAGTCATCTGTACCCTTTTTGGTTCAGTACTTGTGC ATACACGCTGTATCTGTATCTTCGTTTGTGGTCTGTTACATGTTTTTGTC TTTCATATCAACGTGTACCTGTAAAAAGGGCATCAGCAACGGTATGATTA TACTGCAGTAGTAGATGGATAGAGGTACATTGTGTCATCATCTTTGTCCT TCCTGCTTCATGAAGTTTGTCGCCCTCCCTGCTCATGAAAGTATGCACGC CCGTACAAGCGTCATTCATCGCTGGTATGCTTGCCGGCTTGAGGTGCTTT CTTCACACACTTCGTGCATTGCGTTTATTCCTGTTTAGTAAATATTTTCG TCCCATCTTGTTGGTTGATGCAACCCTCGTTGCGTCTCAAGTATAACAGG CGAGACAAGGACAGCAGTTTCCGTTCACACCTACCGTCAGCACCAAAAAA GCCTCTTGAAAAACAAAATAAAGAAACAATATAAGTTTATCACCCTAGGG GAATGGGGATTCACATCAGGCACCACAGCTGGCTGCCCTTTTACAAATAT CATATATCGATACGATATTTCTGATATCAGATATCAGCAGGTTCCATCCT GTACTTTGTAGAGTTCTACTGAGTACATACTCCTATCATGGTATATATCA TATCAACCATACCAACCAACAGTGTCACGCCCATCACTCTTTTTTTCTCT TTATCTCCCCCCCCCCATATCAACCAACAGTATCACGCCTATCACTCTTT TTTTCCCCTTTATCTCCCCCCCCCCCCCCCCCCCCCGAAATCCCATGTTA ACAGCAGTCGATAAGATCGAGATAGCATGAAAACTGACGAATAATGGTAT CACTCGGTAGATGAGAGACAAATCAATGTTCTCGAAGAAGTTTGGGTCAA TTCCATTAACTACAGCGCACAACCGGGTGGTGTATGCAGCGGGAAAATGG CAAAAAAAAAGAAGGAAAAAAGGCGTCGATTGTATGAAGTTGGTAAGTCA CTTTCCAACCTCTTGGGCAGAATTAACGAACGTGGATGTAATGGGCTGTG CTAACCTTAGGACCTTGTCGATGCGCAGCCAAACTACCCGTATACTTGTC TCTACCGTTTTTGCTAAAGACCGTAAGCGTTGCGACCAGAGGTAGTGCAC TATATTGGGAATCGTATTTCGCGCTCAGGTCGACCACTGATTTGGCCGCT TCATGAACCCCGCAGGGGTTCAGTGAGCATGTAGCTGTACATCTGAGCTT CACAGGACGCTTTGATTTGTCTTGGTTCGTGATCTACAGCGAAAGTTCTC GGGCAAATCGTAAGCATGCAGTAGAGGGCAGAACAAGATATCAGGCTGCT GTATGTATCATGAGGATGTTGCGCCGCGCTATATCTCCTATTGCGCCGCA TGTGTAGTGTGTGCTACGTTGGTACAGCTGATGCATGGTTCTTGAGGCTG AGCTGCTTCGAGAGCTGAATCAGATTTGAGTCTTTCACGATTACAGATGA GAGATGGTCTGGGCAATAGAGTTGTACAAGCTGCCGCTATCACAGGTGTT AGATGTTGATTGCCATCTTCAGAGCATACAAGAGTACACCGAAGTAGGGG AGGCAACATGGTGATGGGTCATGGTAAAGATGTCGGCTCGCTTGTTCAAT CGCTGTCAATGCCGTAGAGGACTCAGCCGCGCGACTGAAACATGTTGGAG AAGATGTACGTTTTTCGCATATGCAAGCAGGCGCTTCAATCGGATGATGC GCATAGGGTGTAACGTCAGCGGCAACGTACACGTCGCCGTCCTACACAAA CTACGCGAAACCGTCTAAAGCGTGTAATAAAACTCCGGGCCCATCTCCCT CTCGCCGATCCGACCCCGAATCTTCCGTGTCGGAGTTGCTCGACTCCGAT GGAGCTGCTCCGAGCCAAGGTGCTTCGTCGGCCATGTGGAAATCTTAACC TCCCTGGGGTTCGACGTGCACCGATCTGCCGCCTATTCCCGCGGTGTCTG TCTGCCCTGCCTGCCCCCTTCCCCTTCCTCCACTTCATCTGCTACGGGTT CTCCAACGCCGGCCGTGCGTCCTCCGATACCGCCGCTACACCGTTCGACC TTCTCCACCTCTGTTGATGCAACCCATTAGGCTGATATGAGGGAAAAAGC CCCCCCCCCCCCGAAGAAAACGTTTGCGCGGGCTAGGATAACTTCGCGAT TTTTTTTTTTTTATGTACACGTAAAAATATGCGGGCCACATAATCATTCG GCTGATATGATCGAAAATATTAGAAATAAACGAAGAAGTAAATGCCAAAA CTCGCGAGCGGAGGCATTTAAGTCATGCGAGGAAAAATAACAAACAGTTT GTTACGCGGGGTAGGAAGACTTTTGCCCTGTCGGTATAGACTGCCATGTC GATAAGGAACGGCGTGTGCCCACACTCTTACCTCCGGCCGTGTCAACCAT GGTAAATGGGGCCATCGATTCAAGGGCAACGAGCAGGTTCTCCAACCCCT CCTTGAGCACGTCCGGCGATTCTAGATATGCCCGCAAAGCGCTCCTTAGC TCCATCCTGTACATGGTGTAGTTGCGCGTGTTCGACTGAAGAGCGGATTT CCTGCCTTGGCCCTTCAATGACATTTGTCGTCGCGTTCAACGCTGTAACC GTCCAAACCTGAACCCTCGTTGCGTCCTTCTTGCTCCTATCGTTCAGCAC GTAGTACTCGATCACGTCGTGCCACTTCGTGGTGGACGCCTTGGAGGTTC TCTCGATTTCCGCTCGCTTATTTCCGGTGGCCACCCTTTTCGTCAAGCAC CATCACCAGATCCCCTCCCTTGGGAGTGCACGCGGGAGTTCCACTAAGCG CCTTCAGAGCAATGGTCACCTGAGGTTGTCGGGTGCGCACCAGTTTTTTG CCAAGCTGCCCCGATCATGGCCTGATCGAAGATATAACTTTTGACCTCCT GCTCCGCCTGCTCGCGGCACACACGGTCCCGTAATTATTATTGCACACAG ACAGGAGTTACAAGAATAAGTATGGCGTTGAGTTCCATGACAATCTCACA TGATTGAAACGCGAAGCACAAACCAAATCATGAGTTACTCTCACCCATCC CCCCGGTCAAAAATGACCCCCTCCCCCCATTTCCGCGACAATTTCGCAGG GGGACTGTCAAGTGTTACTGTTCTTTTCAGGCTCGGGCGCCATAGGAATT ACCTCAAGTACGATCCCCTATACTAAATCGATATATCAGGGAAAAAGGTG TCACCGAATTCATGTATCTAAAATTTTGTCTTACCTTATATAGGACCATC GACCGTACATGGAAACATAATAAAAACTGTTTCTTGCCCAAAAGATGCGG GGAAAGGCACCGGGGGGGCGGGGGGGGTATAAAAAAATAAACCCTCACCG GGATTATCATTCCTAAGTTAAGCCACTTGCCACAGTTGGTAGAATTAAGC TATAAAGCTTATATAGTACTTCCACTGTACCCATGTTGAGGTTACGTAGC TCGCCTAAAACTTGACTTGTGTACTTTTATCAGCATTAATTTTTTTTTTA TAAACGGGGAGCTGTGCTCCACGGGAAACGCTACGAGCTCCCATGACTAC TGTCTGTAGAGTTTGTGGGTTGTATCCTGTCCTGATTAGCAGGCTTCCTT ACATGACTAGACACAGAACCGACATGGTTGAGATGTATACGGTAGGGCGG GGGGGGGGTCAATTGTTCAACCATGGCCGCTTCGTAAAAGTAGTGCGAAA ATAATGCGAATCAAAACTGTGTGAATTGCATGCGTTTGTGCATCCCTAAA GGCGTAGAGTCCAATAATTGAAATGGGATTTCTGTTTTTAAGGTCGGGTA AACAGGTGTTGGAAAAAATACAACTGCCCGATCCCCTTCTCGGACCGGCT CCTTCGTCAAACAAAGTGGGTCAAATTATCCCCTCGCCTATCACAGGATG TCTCTCGTATCACACCGATACTTATTTTACACAACCAATTGTAGTTGCAC AATGGTTGGATCGAGCGAGCAAGCGAGCAGGATTGCAGAACACATTCATA GGACCGAGAGACCCAATAAACACGTTGAGCGTGAAACAGCGTGTACGAGA ATTTTCGAAGTTTCCTTCACCACTTGTCGCAGGCCACAGAAACAGCACCG ATACCCTGCGAATCGCTTTGCTCCTGTCTCGACAAGGAACAGCACTATTT CAAGTGCGAAAGGTTAATAGTTATAATCGTTGTTGCCGCATCGTTTCAGA ATAATACTTCTACACGAGCTCCCGAACACGTGGGCCCGTTAAGAAAGGCG GGGGGGGGAATGTTCTTTTTACGGTAGCGATGTCAACGGGTAACGTGCAA CGTGCACTACTGCAGCAAGGACGCAGAGCCATGAAACGCCAAAGCTTACT GAAGATGGGCTCGTTAAAGAACTTCTATCCGAATGCCCGTTGTTTAAGCA AACGACAGCCAACACCACCAGTAAAATGGGCTCACTGAAGTCCTGCCCCG AATGGCGGTTACTCTAGTAATCGACAGCCAACACGCGCCGCCTCAAAACG AGGGCGTCGAATTTCCTCCAAAACAGGAGCAACGAGGTGGAGGGCGATGG CACCGCCACAAACGGCCCGGAATCGTTCTCCTTTAGTCTCACTCTTACTT GAGGACTTGAAGCTTCAAAAATGAGGCGACTGTGATAGCCAAGAGAAGGG CTATTTGATCGTAGAGCACTGCTTGACGCCCCGCGGCCGATCTTTTGTCC TTCATGCCCGATTTTTATCAAAAACTACGGATCTAATTCAGTGACGGCAA AAGTTGTGTCGTTGAAAAGATCGGATCTCATCGAGATGTGTTAATTGACA CGCTCTTTCTGATGGAAGAACATGCTTCGATTTCGAGAGAATCGAACCCG AAAAACATGGCTCCAGGAGGGCGTTATGGCAGCGCTGAGTGTGCGGTAAC CGAGGCCTACGGTGTTCAATAAAAATACAAATGTAAGCTACCATGTATGG AGAGCACGTTCCTGAAGTTCCTGGGATTGTTGAATCCCGGTCCCCTGTAC AATATCCGTCGACGTTTCCGCCATTTTCGGACCAGCTCTCTATCCGACTC GACCCCTGAGGTTCACTCCTATCTAAGAGAGGTCTCTCCCGATAGATGAA AAAGGTGTGTGCCCCACACTACATACCTGAACCTAGACCGAAACTAGAGT AGAGCAGCGCGCCCACAGAAGCCAGTCTACCATGGTTGCGTGGTGTTCTC ACATGTCCCGACTGTACACAGGGAGAGAAAATGCTTATGATACATAGCAT CATCCTACATCGCGTATACGACACCACCAGTAATCCGAGTCCGGGCGTAA TGACGAGTACGGGGAGCCTGGTGCTTTTGTTGTTGTTGATGATGATAGTT AGCGTAATATATAGTTTTAAAGACTGTTGGCCCCCCGCCAGGGGCAAAGC CCGTGTAGGGGCCTGGGCGAAGCCCCCCCCCTGGGAGGACGCTCCCCGCG CACGGGCCCCCGAGGGATACATGCGATTTTGCACCAAAATTTGTTACTTT TTTGTATTGCTCCAAGTCGCCAACATTTGTTTTTACCTTTACGGCAAGTC CATCGTCCTCAGAAACGAAAACATCGCCTGAGGACCAAAAAATATGATCA TATTTTTTTCTTTGTTCTGACCGCGAAGAATTGCTCCTGACGATTTTTTT CGTCTACGGCGAACCTGTTGGCGACCCCAAAAATCGCGTCGGCAGGAAAG GGTTATATTGCGTTTTTTTGGCGATTCCGCCGACATAGCTCTCTATTTAT TACTATCATGATGATGATGATCATCATCATCATCATCATGATAGTAATGT CAAACTTTGAGCTAATCATAAGGATGGTATTTCAGGGAAAACTGAGCTCC AGATGATACCCTACGACGATACCGAGAAGAGATGACGGCTCTCATTCAAT GAATGACCCGACTTTGAGTTGATGCAAAGTTTGCCTCGCTACAACAGCTC TCACCCGAGTATTCGCTCAACCGACCTGTCCTGGCCGAGGCCTGCCTCGC TGCAATAGATCACGTCTTCTGTCACTCAAAAAGGTACAAGCCGGCTATTT TATGACAAAATATTTCAAGGCTTTTGTTGCACAGATTTCTTTCACCCGTC GGTGTACCCGGAGCGACTGCCTCATCGTAACCCCTGTGTGATTGATCCAC GTTGAAGTCTTTGCGACCAAGCTTGTGGAAGGTGTTGTTGAAAGCCTTGA ACAGGCTCTGCCACGCCTGGTGGAAATGCCAACGCAATTTCAACTGCAAG TGCGTATCTCTCCGCTGGAGAGAGCCCTGGACCCCTCGTGGGTGGTCGTG TGGGTGACGGTGTAGCTGAAAAGGACGCCATCGTGTGCATCTGTGTGCTG TTATTTGCTCCGAGGTCGTGTTCGGGACTGCAAGGAATTGGCTTAGAAAA GGCCGATAATCCTGCATTGTTGACCCCTAGATTTTGTTCTGAAAACGACA GCAAATTTCAAGTCCCGACAGTTGAGGTGATTATGAAAACAAGCGTTTCA AAGATACCAAGATCTTCCTGTGAATCACGGTAGAACCAGATATACAGTCC ACCAAAGATTGCCGAGTTTACTTAGGGAACGGAGGGGGTATACCCTAATC GCCACGTTAAAACAACAAGCCAATCAAGTGCTGATCAAGGGGCCAATACA ACATCCAAGAACGTTTCTTTATTTTTTTTTTATGAATCGTTTTATGCATT ACCATATAGGCCAAATTAGCTACATGTATATGTTGACTAAATTTACTAGA GAGATCGACACAATTTCAGAGATACGAAACTCCCTCCCCTCCCTCCTCCC CGGGTGTTTCCACTACCTTGCTCAGTTAATTATTAGTCGAACGATTTTCA AGCTGTGTCCTTTTGTCGTTGCCCGCTGTCTATCCGCCCCCGTTGTCCGT TGTTTGCTTGTCTCTCTTTTCTGTTAGGCTTCGGGATTGCCGCCGAAGCA GGTCGTGACGACCCAGAGCGAGTGGAATCAGACGATGCAGATGCACCTCA CTCTCTTCCTCGATAAACGAACGTGAGCGAGAATTTGGAGTATTTTGCTG ACAATCCTGGTGGATGGTTGACGGAGGATCACTGACTCCCCTTTTGATGT GTAGTGAAGACATATACTCGCGCTGAGGACCTGTCTTCTGTCTGGAGATT GGTGTGATTGATTCCCGCTGGGAGATCTCGGTTTGCAGTTTTAGGGACTA TGATTTTTTGTTTTCAATGCCCGATTTTACATGTTGGCAAATTGATTAAC CGATTTATATTTAGTTCTAGGGCCTGTAATTGGTTTCAGGCACCCAAATT TTTATATACCGGATTGGCTAATAGGATGATTGCAAAAATAAGCAGCTTAT ATGTCGAGAGTACCCCCGTAAAAGGAGATAATTCCCGCCAGAGTCTGTGG AGGACAGAACACACTTTCATAATGGCGTTTGTCGATAGGATTCCTGACCA CGGGATCTGAAGGTGGCGAGTTCGAATCCGACCGTTATCACCAAACAAGA AATTTGCGAGTCAAGCAGGCCGCGGAAGTGGTGGGGGAATATGGACAAAA ACGTCCATACAAGTTTGTAGTAACGTAATCGCAAGAGGTCGGAAGATTGT GTTCAAAAGAGGAGAGAACGTCATCACCGTCAACCGGCGAAACGGGTTAC CCCTAGTAGGCACTTGCAAAATAGCGAAGAGCCTGATAAAGGGGGGCTTT ATGTGGAGAGTACCCTATAGAGGGGGATAATTCTCACTAGAGTCTGCAGA GGACAGAACACCCTTTCACATATATGCTTTTTTTTTTTTTTTTTCAAGAT GCGAGCGTGACACGAGCATGCATTGTAGAAAAAGAAACTGTACTTCGAAG AGTGAAAGAACAGACAAGGTGGAAGGTACGTTGATTTAAAAAAAAACAAA GAACGTTTTTTTAACGGGCAGTTAAGTGCTGTGTGTTTTTCGTATCACAC AAGCGGTACGGTTAAACTTCGTCTGCACGTGCTTCATTTGTAGAGGAAGA TTTCATGTATCCGCATGAAGTACCACTATGTATGACACGGGCGTGGTAAT TATTACAGGTTCGGAATACTTGTATTGTAACACTTTCGCTGTTGAATGAG AAAGCTGGATACAGTATTTTGACAGAAGAATAAATCGCTCGCTCGCTCGC CGCCCATGCTCGCCGCCCATGCTCGCCGCCCATGGCTTGTCATCGCTCAG TTCCCGCTTCCAGGACAAGGAATATAAATTGCGATTGGTGCAGAAGGATA ACCGTGGGATGCTCGTGCCTCCAGTGTTGGCAACGTTCACGCTCGACGCC AGCTTGTACGCGCATCTTGGTGTGGGGTACGTTTTTTTTTTCTCATTATG TACTGTATGTATGTGTATTTTTGTTGGTATGTGTATTTTTGTTGGTATGT GTTTTTTGCGTCCGTCCGTCGAAGTATTTTGCGTATTAGCTGATGGATGA GTGTCTGTCGTCACCATAAAATTTGGGCACGTGAACCTCGGCATGTACAT CTGCGATCCAAAAGTACTCTGATATGTTTAGAAAGATTGGACGGGTTCCC GGGTGGATGAGGTCAAGGCAATCCCCCCCCCCCCGTCTCCCGATTGCAAA AATGAGGTGATAACGGTTGTAGGAGACAGCGATTTGCCTGTAAAGGCGAG GCTTGGTGTTCATGAGATCGATACAACGTTTTTGAGCCACCATTCAGCAA CATAGGAAAGAGCGATCAGCCATCAGGATATTGCTCTGATAGGAACAAAC CTCTACCGTCTCCAGGAAGCGTGGTCAATGTCCTAACAATAACAACTACG GCATGCAAAACATGGGACTCTCTCCGTCTCCGCCCCTGGCCTCTCCCCCC CCCGCCCCCCTATCCCACCCCCCTCGCGCGTGCGACTCTCTCGTATCCGC GTCCGTGTCGGGGTTAACTGTTTTTGGTTATCCGCTCGAAAGGCCCTCGG TAGAGCAGCAGGTGGATTTGTACGCACCAAAGCTGAACGGGCTAGGGGGT TGTGCCACCGTGCGCCTGCGTGTTCGCTGCTGCGAGCCACGGGAAGGGCC ACTCCCTGTCATCGGTCGCTCGGTGTCTGCCTCGGACTTGCGCAAGGTAC AGTAGATAACGCTAACGTATTAACCACGCGTGCTCGCGAGGACGGAGCTT CGTTCCCATCAGAGCTATTTCCGCTGGCCAAATGTGTCTCAAAATATTTT ACTCGCTCTATCTACCGCAACCCACGCCTTTTTAGGCCAATTTTCATCTC CTGGAATCAGCTATTGCCTTCTTTTGTCAAATTGCAAGATTGAAAAACCT CTCTATCGCATCCTTTGATTACCCACCACTTGATTCATCAGATTCATTTA TCTGTCGTTGCGCGCGCGCGCGCGCGCGCGGGGCGGGGTCATTGGAGGAG CGGGGAGGGGGGAGTTATTTACGATGAACGCAGATCATAGTCAGAGGACA TGGACCTCACTTCTCTATATAGGACAACGCGGGGCTGCAATTGGGAAATT CTGGGTGAAAACGCGTACTCATGTTTCAATGTCGTATTTGTCAAGATCAC AGACCGCGTCCTCGAGAGGATGGAGTGCGGGTACTTGGCACAAGCAGTCG TGTACGCCGGTCATAGTCCAAAACCATCGGCCTCGCTTCCCTATTGACAA CGCCTACACGGAGTGATGATGTGGCGGCGGAGGGGGGTAGGGAATGTTTT AACGAGCGCCGCTCCGCAAAGCGACTCGATGAAAAGGTCGGATTAGAGCC TATTCGATGACATGCGTTCACGCATCCCGAAAGGTCAACAACGCACGATT CGGAACGGCCGTTCTGTTTGAGGACAATTTTTTTGTTTTGCCTTGCTGTT CTGCAAAGCGGTTCAAGGCTCGAAAACGAATCGACTGAAATTACTCTAGG GGCGATTGGCCATCGGAAATCACTCTGATACAACCCCAATGCTCCCCTCT CCTGAGGACGTGTGGTCAATGGTCTTAACAACTACGGCATGCAAAACAAA AGTACGCCTCCCCCCCCCTCCCTACCGGAGCCCGACTCGGAGGTACACGC CGGTGGTAGGAGGAAGGTAGGCGGCGCGCGCACAAAGTTAATCACCATGT ACTATCGTTGTAGACGACATGTGCATGCCTCGGATGACGATCCTTGAAGG GTCATCGCGGAAACCTTCGGAAGCATGACAAGTGTGAGGACACTGGGCAA AAAGACCTTACAAATCACGTCGAATCGATAGACACCCGACGGAGTGCTCG TTCTTCACGCTGCTCGTCTGTCTTGATGTAGTGTTCGATTTTATAAAGCA CGAGTACCCCCTAACAGTTTCTGTTTTGCTTCTTGATCGTGTGAAGGCTG TTGGCTGAATGAATGTCGAACGCTCCATGTCCTATTCAAGATGTTTTTAC GTAATAACGAAGACCTTCGTTCCAGGTGTGAAGTGAAATATGGAAACAAA ACTCGTTGGCTTCTCGTCCTGCTTGTCTGCTTGCCTACCTGTCTCGGCGG CCTTGCCAAATTCTCAGGACTCAACGGGGATGACGCGTTCGTCGGGATCG GGGTTACCCCCGCGAGGTGCGATGAATCACATGCGACGGCCTTCTCTTCC CCCATTGCAGTCAGCGCTCCTGGTCGGCTCGTCGTTCGGGTTTTCGATGT CCGGGTCGGATTCGAGGCAGTCCGTTGGGTCCACCGGTAGCTCGGGCTTT TCTACCCCCATGTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig3124:7785..18699+

>mRNA_H-paniculata_contig3124.8443.1 ID=mRNA_H-paniculata_contig3124.8443.1|Name=mRNA_H-paniculata_contig3124.8443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig3124:7785..18699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGCATTGCTGAGGAAAGCTTCGAGAGTGAACCTCGTGGCGATGGA
CTTTATGCTGCAAGTTACAGTGGAGGAGCTAGTGTTGGGGACGCTTGATG
CTGGGCGCACGCTTAGCTTTGAGCTATCTCGAGGGACCAAGATGGCTGCA
TTGCTGAGGAAAGCTTCGAGAGTGAACCTCGTGGCGATGGACTTTATGCT
GCAAGTTACAGTGGAGGAGCTAGTGTTGGGGACGCTTGATGCTGGGCGCA
CGCTTAGCTTTGAGCTATCTCGAGGGACCAAGGCTTCGGGATTGCCGCCG
AAGCAGGTCGTGACGACCCAGAGCGAGTGGAATCAGACGATGCAGATGCA
CCTCACTCTCTTCCTCGATAAACGAACGCTTCGGGATTGCCGCCGAAGCA
GGTCGTGACGACCCAGAGCGAGTGGAATCAGACGATGCAGATGCACCTCA
CTCTCTTCCTCGATAAACGAACTTCCCGCTTCCAGGACAAGGAATATAAA
TTGCGATTGGTGCAGAAGGATAACCGTGGGATGCTCGTGCCTCCAGTGTT
GGCAACGTTCACGCTCGACGCCAGCTTGTACGCGCATCTTGGTGTGGGTT
CCCGCTTCCAGGACAAGGAATATAAATTGCGATTGGTGCAGAAGGATAAC
CGTGGGATGCTCGTGCCTCCAGTGTTGGCAACGTTCACGCTCGACGCCAG
CTTGTACGCGCATCTTGGTGTGGGGCCCTCGGTAGAGCAGCAGGTGGATT
TGTACGCACCAAAGCTGAACGGGCTAGGGGGTTGTGCCACCGTGCGCCTG
CGTGTTCGCTGCTGCGAGCCACGGGAAGGGCCACTCCCTGCCCTCGGTAG
AGCAGCAGGTGGATTTGTACGCACCAAAGCTGAACGGGCTAGGGGGTTGT
GCCACCGTGCGCCTGCGTGTTCGCTGCTGCGAGCCACGGGAAGGGCCACT
CCCTGACTCAACGGGGATGACGCGTTCGTCGGGATCGGGGTTACCCCCGC
GAGGTGCGATGAATCACATGCGACGGCCTTCTCTTCCCCCATTGCAGTCA
GCGCTCCTGGTCGGCTCGTCGTTCGGGTTTTCGATGTCCGGGTCGGATTC
GAGGCAGTCCGTTGGGTCCACCGGTAGCTCGGGCTTTTCTACCCCCATGT
GAGACTCAACGGGGATGACGCGTTCGTCGGGATCGGGGTTACCCCCGCGA
GGTGCGATGAATCACATGCGACGGCCTTCTCTTCCCCCATTGCAGTCAGC
GCTCCTGGTCGGCTCGTCGTTCGGGTTTTCGATGTCCGGGTCGGATTCGA
GGCAGTCCGTTGGGTCCACCGGTAGCTCGGGCTTTTCTACCCCCATGTGA
back to top