prot_H-paniculata_contig3118.8431.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3118.8431.1
Unique Nameprot_H-paniculata_contig3118.8431.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: D7FJP9_ECTSI (Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJP9_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 2.730e-107
Identity = 158/166 (95.18%), Postives = 162/166 (97.59%), Query Frame = 0
Query:   22 KPMPLLIRILMIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            KP PLLIRILMIGDSSVGKTSLVLRYD RGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREV REEGEQLAAELGVPYMETSAK+NLNV+ETF +LA+RV
Sbjct:   14 KPTPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRV 179          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A835YM14_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM14_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.140e-74
Identity = 115/162 (70.99%), Postives = 134/162 (82.72%), Query Frame = 0
Query:   26 LLIRILMIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            LLIR+LMIG+SSVGKTSLVLRYD RGFN +FTTTIGVDYSDR+L +D R VKLQIWDTAGQERFHSLTTSFFKRAEGF LV+DVS+R+SF++V+ WM DI EQGK  SDVV+ GNKCD++ R V + E E+LA    VPY E SAKDN+NV   F+ LA+ V
Sbjct:   22 LLIRVLMIGESSVGKTSLVLRYDKRGFNAKFTTTIGVDYSDRMLTVDARAVKLQIWDTAGQERFHSLTTSFFKRAEGFALVFDVSDRRSFDAVARWMGDIREQGKADSDVVLVGNKCDVKERAVAKGEAEKLAKHFAVPYFEASAKDNVNVDVIFETLASSV 183          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A836CM00_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM00_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.390e-71
Identity = 108/156 (69.23%), Postives = 128/156 (82.05%), Query Frame = 0
Query:   32 MIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            MIG+SSVGKTSLVLRYD RGFN +FTTTIGVDYSDR+L +DG+Q+KLQIWDTAGQERFHSLTTSFFKRAEGFVL +DVS+R SFESV+ WMKDI   GK  SDVV+ GNKCD++ R V +EE + LAA+  VPY E SAK+++NV   F  +A  +
Sbjct:    1 MIGESSVGKTSLVLRYDKRGFNSKFTTTIGVDYSDRMLTIDGKQIKLQIWDTAGQERFHSLTTSFFKRAEGFVLCFDVSDRASFESVARWMKDIEASGKPDSDVVLVGNKCDMKERAVAKEEAQALAAQFRVPYFEASAKEDVNVDAVFSTVANNI 156          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A6V1KKE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KKE1_HETAK)

HSP 1 Score: 207 bits (526), Expect = 9.590e-65
Identity = 100/169 (59.17%), Postives = 131/169 (77.51%), Query Frame = 0
Query:   21 SKPMPLLIRILMIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            SK  P +IRILM+GDSSVGKTSLV+R+DD+GF  ++ TTIGVDYSDRL+E+DG + KLQ+WDTAGQERF +LT+SFFKRA+GF L YD+S+R SF++V+ WMKDI EQ   G ++++ GNKCD+    REV  +EG  LA E G P++E SAK + NV + F  +A+ V
Sbjct:    7 SKKQPPIIRILMVGDSSVGKTSLVMRFDDKGFLNKYATTIGVDYSDRLVEVDGDEYKLQVWDTAGQERFRALTSSFFKRADGFCLCYDISSRHSFDNVNRWMKDICEQAPSGFNLILVGNKCDVPEARREVAYQEGVDLAGEFGAPFLEASAKTDRNVDDVFMTVASAV 175          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A7S2AY15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY15_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.410e-60
Identity = 95/163 (58.28%), Postives = 122/163 (74.85%), Query Frame = 0
Query:   27 LIRILMIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG--REVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            ++RILMIGDS VGKTSLVLRYD+  F+ +F TTIGVDY D++++++G+ VKLQIWDTAGQERF SLT++FF RA+G VL YDVS+R S+E + TWM +I +      DVVICG+KCD+    R+V  EEG+ LA + GVPY E SAK N NV+  F  LA  +
Sbjct:   18 VVRILMIGDSGVGKTSLVLRYDEDAFSHKFVTTIGVDYRDKVVQVNGKSVKLQIWDTAGQERFRSLTSNFFSRADGMVLAYDVSDRTSYEHIKTWMSEIRKHAPEDVDVVICGSKCDIDATDRKVTEEEGQTLAEDEGVPYFEASAKANTNVEAMFMQLATTI 180          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A7S2SVP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVP5_9STRA)

HSP 1 Score: 191 bits (484), Expect = 2.180e-58
Identity = 95/167 (56.89%), Postives = 120/167 (71.86%), Query Frame = 0
Query:   23 PMPLLIRILMIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDL--QGREVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            P   ++R+LMIGDS+VGKTSLVLRYD+  F+ +F TTIGVDY D+++++ G  VKLQIWDTAGQERF +LT +FF RA+G VL YDVS R SFE V  W + IVE+      +++CG KCD   + REV +E+GE LA EL +P+ ETSAK N NV E F  LA  V
Sbjct:    8 PKRKVVRLLMIGDSNVGKTSLVLRYDENRFSHKFVTTIGVDYRDKVVDIHGANVKLQIWDTAGQERFRALTANFFSRADGIVLAYDVSKRTSFEGVRRWHEQIVEKAAPEVQMLLCGTKCDCSPEEREVSQEDGESLAKELAIPFFETSAKGNRNVAEAFMTLATAV 174          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A1Z5K1V2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K1V2_FISSO)

HSP 1 Score: 184 bits (466), Expect = 1.440e-55
Identity = 88/162 (54.32%), Postives = 119/162 (73.46%), Query Frame = 0
Query:   27 LIRILMIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            ++R+LM+GDS+ GKTSLVLR+D   F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNKCDL   R V  EEG+QLA E GV + E+SA    NV+  F  LA  +
Sbjct:    8 IVRLLMVGDSACGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKCDLDNDRVVTYEEGKQLADEYGVQFFESSALTGQNVESMFTALATTI 169          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A7S4JU42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JU42_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.940e-55
Identity = 96/181 (53.04%), Postives = 121/181 (66.85%), Query Frame = 0
Query:   16 AGGVNSKPMPL--------LIRILMIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            A   N  P PL        ++R+LM+GDSS GKTSLVLR+D   F+ +F TTIGVDY D+ + ++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YDVSNR SF+ V  WM+DI  +     DVV+CGNK DL   R V  EEG  LA E GV + ETSA    NV++ F DLA  +
Sbjct:   14 AAAANPPPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKTVRIEGAPLRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDVSNRPSFDHVHGWMRDIRTRAPPDCDVVLCGNKSDLDADRVVSTEEGAALAEECGVRFFETSALTGNNVEDMFMDLATAI 194          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A8J2SRM0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRM0_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.130e-55
Identity = 93/168 (55.36%), Postives = 122/168 (72.62%), Query Frame = 0
Query:   26 LLIRILMIGDSSVGKTSLVLRYDDRGFNLR----FTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDL--QGREVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            ++IR+LMIGDSSVGKTSLV+RYD+  F+      F TTIGVDY D+L++++GR +KLQIWDTAGQERF SLT++FF RA+GF + +DV  R SF  V  W+ D+ +  K   ++ + G KCDL  + R+V + E E+LA E G+PY E SAK N NV E F+DLAARV
Sbjct:   12 MVIRLLMIGDSSVGKTSLVVRYDEDSFSATPRTMFMTTIGVDYRDKLVKIEGRDIKLQIWDTAGQERFRSLTSNFFGRADGFAVCFDVGARASFNHVRQWLDDVEKNKKGPVELCLIGCKCDLAAEKRQVSKAEAEKLAGEKGLPYFEASAKTNQNVAEAFEDLAARV 179          
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Match: A0A1E7F4E5_9STRA (Ras-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4E5_9STRA)

HSP 1 Score: 182 bits (463), Expect = 8.260e-55
Identity = 88/162 (54.32%), Postives = 120/162 (74.07%), Query Frame = 0
Query:   27 LIRILMIGDSSVGKTSLVLRYDDRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQG-REVPREEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV 187
            ++R+LM+GDSS GKTSLVLR+D   F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFVL YD+SNR SF+ V  WM+DI  +     D+V+CGNK DL   R V  EEG+QLA E GV + ETSA   +NV++ F  L+  +
Sbjct:   22 IVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGVPMRLQLWDTAGQERFRSLTSNFFGRADGFVLTYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLDNDRVVTLEEGKQLAEEYGVEFFETSALTGINVEKMFYGLSTTI 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3118.8431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP9_ECTSI2.730e-10795.18Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YM14_9STRA1.140e-7470.99Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A836CM00_9STRA2.390e-7169.23Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1KKE1_HETAK9.590e-6559.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AY15_9STRA2.410e-6058.28Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2SVP5_9STRA2.180e-5856.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5K1V2_FISSO1.440e-5554.32Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S4JU42_9STRA1.940e-5553.04Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
A0A8J2SRM0_9STRA2.130e-5555.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1E7F4E5_9STRA8.260e-5554.32Ras-domain-containing protein n=1 Tax=Fragilariops... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 131..144
score: 38.92
coord: 51..67
score: 29.26
coord: 28..49
score: 39.64
coord: 165..187
score: 40.14
coord: 69..91
score: 54.09
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 29..187
e-value: 2.4E-31
score: 120.2
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 30..185
e-value: 2.7E-10
score: 12.6
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 33..183
e-value: 0.0048
score: -4.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 28..187
e-value: 1.7E-72
score: 256.8
NoneNo IPR availableGENE3D3.40.50.300coord: 19..187
e-value: 6.7E-60
score: 203.6
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 20..185
NoneNo IPR availablePANTHERPTHR24073:SF10coord: 20..185
NoneNo IPR availablePROSITEPS51419RABcoord: 21..187
score: 30.214
IPR001806Small GTPasePFAMPF00071Rascoord: 29..186
e-value: 2.0E-55
score: 186.8
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 28..181
e-value: 1.8E-26
score: 90.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 25..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3118contigH-paniculata_contig3118:8777..16307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3118.8431.1mRNA_H-paniculata_contig3118.8431.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3118 8232..16307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3118.8431.1 ID=prot_H-paniculata_contig3118.8431.1|Name=mRNA_H-paniculata_contig3118.8431.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MNGLAGAGGGGVGGVAGGVNSKPMPLLIRILMIGDSSVGKTSLVLRYDDR
GFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRA
EGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVP
REEGEQLAAELGVPYMETSAKDNLNVKETFDDLAARV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase