prot_H-paniculata_contig3107.8403.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3107.8403.1
Unique Nameprot_H-paniculata_contig3107.8403.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length226
Homology
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 6.800e-40
Identity = 106/267 (39.70%), Postives = 119/267 (44.57%), Query Frame = 0
Query:   50 EQQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLK----------------------------------------------------------------------------------------SFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLERCYEPDTSKGWQTQAFEV-----------------------------------PILNRASFDVRLMACVWLVAPGPKEPYGASSEDQQAQ 193
            E+QA+  G + GWMQQLLTKVLANMSI VSNLV KY+DADVV SA LK                                                                                        S +CFSADPDR+WTP FASLDDPFG LHKLV ASDLT+CL+R   PD+S+  Q QAFEV                                   PILNRASF+V L+ACVWLVAPGP E   A+ EDQQ Q
Sbjct:   72 EEQAAPAGVS-GWMQQLLTKVLANMSIEVSNLVLKYEDADVVLSAALKLSPTSWIVQQCCCPACTTCTMPYRAFPTNTLRRDMEARGEPGGESPDLLLSMARGNTATPELVVQQYHNATAVMKSYAACLLHVQPQQSLVCFSADPDREWTPAFASLDDPFGFLHKLVHASDLTVCLDRYCAPDSSRRRQVQAFEVLRPASAPFRLGRGCSSVQLPRMNCYVVVGFYVKKVPILNRASFEVHLLACVWLVAPGPPESSFAAWEDQQTQ 337          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: A0A024G1K2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G1K2_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.440e-27
Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISPTTHESSND----TRAREEQQASSTGAAT-------GWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLERCYEPDTSKG-WQTQAFEVPILNRASFDVRL 168
            RGFI+ELRIHIPWT+L S+PIE+K  T+EII+  TT +S ND    T A  ++   S+G AT        W+ + L K+L N+++ V+NLV KY++++VV S  L S    SA     W   FA ++ P   + K++ A DLTI L+R  E +T     +   +E+PILNR S   R+
Sbjct:   66 RGFIRELRIHIPWTQLLSQPIEVKLYTIEIIL--TTVKSQNDAQRSTSASTKRSRVSSGQATQLDEAKPSWIHEALQKILVNVTVQVNNLVVKYEESEVVLSMALGSLEIKSARNRLGWMAGFAEVEGPQQEICKIITAGDLTIFLDRYTESETPDAPRRVIGYEIPILNRGSISSRV 241          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: H3H1A7_PHYRM (Chorein N-terminal domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1A7_PHYRM)

HSP 1 Score: 111 bits (277), Expect = 9.390e-26
Identity = 66/168 (39.29%), Postives = 97/168 (57.74%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISPTTHESSNDTRAREEQQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLER-CYEPDTSKGWQTQA--FEVPILNRASFDVR 167
            RGFI+ELRIHIPWT+L S+PIE+K  T+E+I++  +   +    A +  +       +GW+   L K+LAN+S+ V+NLV KY+  DVV S  L +   +SA     W  +F  L      + K + A D+TI L+R   E DT  G + +   +EVP+L+R S  VR
Sbjct:   65 RGFIRELRIHIPWTQLLSQPIEVKLYTIELILTAKSERGAAADAAIDAAEDKIEQPKSGWLHDTLQKILANVSVQVNNLVLKYEHDDVVFSIALGTLDFYSASERDHWRRSFEELGVGRRAICKRIDAKDVTIFLDRYTSEADTKDGVRRKVLGYEVPVLSRTSASVR 232          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: F0VZU0_9STRA (Uncharacterized protein AlNc14C3G419 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZU0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.010e-25
Identity = 69/182 (37.91%), Postives = 103/182 (56.59%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISPT---------THESSNDTRAREEQQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLERCY---EPDTSKGWQTQAFEVPILNRASFDVRLMACV 172
            RGFI+ELRIHIPWT+L S+PIE+K  T+EII++           T  S+   R+   Q      +   W+ + L K+L N+++ V+NLV KY+++++V S  L S    SA     WT  FA  + P   + KL+ A+DLTI L+R     E DT +  +   +E+P+LNR S   R+  C+
Sbjct:   66 RGFIRELRIHIPWTQLLSQPIEVKLYTIEIILTTVDSKKGGQRPTSPSTKRNRSPSGQDTQFDESKPSWIHESLQKILVNVTVQVNNLVVKYEESEIVFSMALGSLEIKSAKNRLGWTAGFAEAEGPQQKICKLINATDLTIFLDRYTKNKEVDTPR--RVIGYEIPMLNRGSISSRVRLCL 245          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: A0A5D6Y3T1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3T1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.880e-25
Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISPTTHESSNDTRAR-----EEQQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLERCYEPDTSKGWQTQAF------EVPILNRASFDVRLMACVWLVAPGPKEP 182
            RGFI+ELRIHIPWT+L S+PIE+K  T+E+I+   T    ++ RA+     E+ +       +GW+   L ++LAN+SI V+NLV KY+  D+V S  L +   +SA   +DW  +F     P   + K + A DLTI L+R Y    S     + +      EVP+L R S   R    +   A  P+ P
Sbjct:   66 RGFIRELRIHIPWTQLLSQPIEVKLYTIELIL---TARGDDERRAKRTASPEQPEPKMEQPKSGWLHDSLQRILANISIQVNNLVLKYEQDDIVLSVALGTLDIYSASAAKDWKRSFEEPQGPAQAISKRIDAKDLTIFLDR-YTRGRSDSKTAEVYRKVVGYEVPVLTRTSLSARARLLMKPRAAAPETP 252          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: A0A833SYH9_PHYIN (Vacuolar-sorting-associated 13 protein C-terminal n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SYH9_PHYIN)

HSP 1 Score: 112 bits (279), Expect = 1.180e-24
Identity = 66/174 (37.93%), Postives = 101/174 (58.05%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISPTTHES-SNDTRAREEQQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLER-----CYEPDTSKGW---QTQAFEVPILNRASFDVR 167
            RGFI+ELRIHIPWT+L S+PIE+K  T+E+I++     + ++   A  +++A      +GW+  +L K+LAN+S+ ++NLV KY+  DVV S  L +   +SA     W  +F  L      + K + A D+TI L+R       + DT +G    +   +EVP+LNR S  VR
Sbjct:   65 RGFIRELRIHIPWTQLLSQPIEVKLYTIELILTGKNSAARTSSVDAAVDREAEIDQPKSGWIHDMLQKILANVSVQINNLVLKYEHDDVVFSIALGTLDFYSASESDGWKRSFEELKGGRRAICKRIDAKDVTIFLDRYKSDGAAKEDTRQGTVRRKVVGYEVPVLNRTSVSVR 238          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: A0A2D4C9P6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9P6_PYTIN)

HSP 1 Score: 110 bits (276), Expect = 2.420e-24
Identity = 65/184 (35.33%), Postives = 105/184 (57.07%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISP----TTHESSNDTRAREEQQASSTGAA---------TGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLER-----CYEPDTSK-GWQTQAFEVPILNRASFDVR 167
            RGFI+ELRIHIPWT+L S+PIEIK  TVE+I++       H+ +  T  R+  ++ S  +A         +GW++  L K+L N+++ ++NLV KY+  D+V S  L +   ++A+  +DWT  F         + ++  A DLT+ L+R      + P TS+   +   +E+P+LNR S  +R
Sbjct:   66 RGFIRELRIHIPWTQLLSQPIEIKLYTVEMILTAQEADAKHQRNASTDKRKSSRSKSMESADDDEIENPKSGWLRDTLQKILTNVTLQINNLVLKYEQDDIVLSVALGTLDFYAANDGKDWTRVFTEPKGKDQSIARVAEAKDLTVFLDRYERDETWHPATSRVPRRVSGYELPLLNRTSIVMR 249          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: A0A3M6VGT0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGT0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 4.040e-24
Identity = 67/180 (37.22%), Postives = 101/180 (56.11%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISP-------TTHESSNDTRAREEQQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLER-CYEPDTSKGWQTQ-------AFEVPILNRASFDVR 167
            RGFI+ELRIHIPWT+L S+ IE+K  T+E+I++           ++  DT   +E+Q       +GW+   L K+LAN+++ V+NLV KY+  DVV S  L +   +SA+   +W  +F  L      + K + A+D+TI L+R   E +T  G Q          +EVP+L+R S  VR
Sbjct:   65 RGFIRELRIHIPWTQLLSQAIEVKLYTIELILTAKKDCQERVQRDTFVDTMTLKEEQEEMEQPKSGWIHDTLQKILANVTVQVNNLVLKYEHDDVVFSIALGTLNFYSANEKHEWKRSFEELKGKQRTICKRIDANDVTIFLDRYTSEGNTKLGMQNDPVRRNVVGYEVPVLSRTSASVR 244          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: A0A8K1CF18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF18_PYTOL)

HSP 1 Score: 110 bits (274), Expect = 5.270e-24
Identity = 67/189 (35.45%), Postives = 101/189 (53.44%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIIS---PTTHESSNDTR-------------AREEQQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLERCYEPDTSKGWQTQA--------FEVPILNRASFDVR 167
            RGFI+ELRIHIPWT+L S+PIE+K  TVE+I++   P+   S +                A  ++ +      +GW++  L K+LAN++I V+NLV KY+  DVV S  L    C+S    R W  +F         + +++ A DLTI L+R Y  D S+   + +        +EVP+L+R S  +R
Sbjct:   66 RGFIRELRIHIPWTQLLSQPIEVKLYTVELILTARDPSRRHSVDSAMXXXXXXXXXXXXXASSKEASEIENPKSGWLRDTLQKILANVTIQVNNLVMKYEQDDVVLSVALGVLDCYSVSETRGWVRSFVDPQGSTRAISRVIEAKDLTIFLDR-YTSDRSQSDPSASEIRRRVVGYEVPVLSRTSLSIR 253          
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Match: A0A0W8B040_PHYNI (Vacuolar protein sorting-associated protein 13B n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8B040_PHYNI)

HSP 1 Score: 108 bits (269), Expect = 2.510e-23
Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 0
Query:    3 RGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISP---TTHESSNDTRAREEQQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFMCFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLERCYEPDTSKGWQTQ--------AFEVPILNRASFDVR 167
            RGFI+ELRIHIPWT+L S+PIE+K  T+E+I++    +   +S DT    E +       +GW+   L ++LAN+S+ V+NLV KY++ DVV S  L +   +SA+    W  +F  L      + K + A D+TI L+R      +K    Q         +EVP+L+R S  VR
Sbjct:   65 RGFIRELRIHIPWTQLLSQPIEVKLYTIELILTGKNRSARAASVDTAVDREPEIEQ--PKSGWINDTLQRILANISVQVNNLVLKYENDDVVFSIALGTLDFYSANEKESWKRSFEELKGGRRAICKRIDAKDVTIFLDRYTNDGVTKDGGRQDSVRRKVIGYEVPVLSRTSASVR 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3107.8403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE6.800e-4039.70VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A024G1K2_9STRA3.440e-2741.57Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
H3H1A7_PHYRM9.390e-2639.29Chorein N-terminal domain-containing protein n=1 T... [more]
F0VZU0_9STRA1.010e-2537.91Uncharacterized protein AlNc14C3G419 n=1 Tax=Albug... [more]
A0A5D6Y3T1_9STRA1.880e-2536.65Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A833SYH9_PHYIN1.180e-2437.93Vacuolar-sorting-associated 13 protein C-terminal ... [more]
A0A2D4C9P6_PYTIN2.420e-2435.33Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A3M6VGT0_9STRA4.040e-2437.22Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A8K1CF18_PYTOL5.270e-2435.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0W8B040_PHYNI2.510e-2337.50Vacuolar protein sorting-associated protein 13B n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031646Vacuolar protein sorting-associated protein 13, second N-terminal domainPFAMPF16908VPS13coord: 62..140
e-value: 2.5E-7
score: 30.7
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 3..53
e-value: 1.6E-9
score: 37.9
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 3..139
NoneNo IPR availablePANTHERPTHR16166:SF126VACUOLAR PROTEIN SORTING 13B, ISOFORM Acoord: 3..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3107contigH-paniculata_contig3107:2264..4690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3107.8403.1mRNA_H-paniculata_contig3107.8403.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3107 2264..4690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3107.8403.1 ID=prot_H-paniculata_contig3107.8403.1|Name=mRNA_H-paniculata_contig3107.8403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
MCRGFIKELRIHIPWTRLQSRPIEIKFNTVEIIISPTTHESSNDTRAREE
QQASSTGAATGWMQQLLTKVLANMSISVSNLVFKYKDADVVASAFLKSFM
CFSADPDRDWTPTFASLDDPFGLLHKLVRASDLTICLERCYEPDTSKGWQ
TQAFEVPILNRASFDVRLMACVWLVAPGPKEPYGASSEDQQAQVDWRDLA
DEDAVEMSGSSWGVGKRGGGAGTATQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031646VPS13_N2
IPR026854VPS13_N
IPR026847VPS13